Michael R. Miller

PROFILE

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Aliases
Michael Miller, Michael R Miller, Michael Ryan Miller
Publication record
68 papers · 6,481 citations · H-index 29

PAPERS

AmpliRAD: A New Method Combining Amplicon and RAD Sequencing
20260 citationsauthor #2
Novel genetic association with migratory diapause in Australian monarch butterflies
20250 citationsauthor #4
Single generation epigenetic change in captivity and reinforcement in subsequent generations in a delta smelt (Hypomesus transpacificus) conservation hatchery
20244 citationsauthor #2
Population genomic monitoring provides insight into conservation status but no correlation with demographic estimates of extinction risk in a threatened trout
20221 citationsauthor #6
Population genomic analysis of the Speckled Dace species complex ( Rhinichthys osculus ) identifies three distinct lineages in California
20224 citationsauthor #7
Population genetics of a recent range expansion and subsequent loss of migration in monarch butterflies
202216 citationsauthor #5
Implications of Large-Effect Loci for Conservation: A Review and Case Study with Pacific Salmon.
202219 citationsauthor #10
Genomics facilitates evaluation and monitoring of McCloud River Redband Trout (Oncorhynchus mykiss stonei)
20210 citationsauthor #2
Population genomic analysis of the speckled dace species complex (Rhinichthys osculus) identifies three species-level lineages in California
20210 citationsauthor #7
Reviewing and Synthesizing the State of the Science Regarding Associations between Adult Run Timing and Specific Genotypes in Chinook Salmon and Steelhead: Report of a workshop held in Seattle, Washington, 27–28 February 2020
202016 citationsauthor #8
Forests do not limit bumble bee foraging movements in a montane meadow complex
202027 citationsauthor #2
Rapture facilitates inexpensive and high-throughput parent-based tagging in salmonids
20203 citationsauthor #6
On the ecology and distribution of steelhead (Oncorhynchus mykiss) in California’s Eel River
20208 citationsauthor #4
Indirect genetic control of migration in a salmonid fish
20208 citationsauthor #3
A little SNP of this, a little SNP of that: The discovery of 116 single nucleotide polymorphism markers to enable the rapid identification of individual Pacific walrus (Odobenus rosmarus divergens)
20202 citationsauthor #5
Temporal dynamics of migration‐linked genetic variation are driven by streamflows and riverscape permeability
202021 citationsauthor #2
Wildfire reveals transient changes to individual traits and population responses of a native bumble bee (Bombus vosnesenskii).
202030 citationsauthor #2
Do genomics and sex predict migration in a partially migratory salmonid fish, Oncorhynchus mykiss?
201927 citationsauthor #2
Hybridization between two parapatric ranid frog species in the northern Sierra Nevada, California, USA
201914 citationsauthor #6
Publisher Correction: Sex-dependent dominance maintains migration supergene in rainbow trout
20196 citationsauthor #19
Phylo-comparative analyses reveal the dual role of drift and selection in reproductive character displacement
20191 citationsauthor #2
The Local South American Chicken Populations Are a Melting-Pot of Genomic Diversity
20191 citationsauthor #11
Assessing thermal adaptation using family‐based association and FST outlier tests in a threatened trout species
201915 citationsauthor #4
Large‐effect loci affect survival in Tasmanian devils (Sarcophilus harrisii) infected with a transmissible cancer
201856 citationsauthor #18
A Versatile Rapture (RAD-Capture) Platform for Genotyping Marine Turtles
201826 citationsauthor #2
Demographic modelling reveals a history of divergence with gene flow for a glacially tied stonefly in a changing post‐Pleistocene landscape
201832 citationsauthor #6
Sex-dependent dominance maintains migration supergene in rainbow trout
2018231 citationsauthor #18
Flow modification associated with reduced genetic health of a river-breeding frog, Rana boylii
201813 citationsauthor #3
Anthropogenic habitat alteration leads to rapid loss of adaptive variation and restoration potential in wild salmon populations
2018116 citationsauthor #12
Gene expression differs in susceptible and resistant amphibians exposed to Batrachochytrium dendrobatidis
201846 citationsauthor #5
Best available science still supports an ancient common origin of Devils Hole and Devils Hole pupfish
20184 citationsauthor #7
Failure to differentiate between divergence of species and their genes can result in over-estimation of mutation rates in recently diverged species
201711 citationsauthor #3
On the origins and genetic diversity of South American chickens: one step closer.
20179 citationsauthor #8
Genomics clarifies taxonomic boundaries in a difficult species complex
201720 citationsauthor #5
Genomic Analysis Reveals Genetic Distinctiveness of the Paiute Cutthroat Trout Oncorhynchus clarkii seleniris
20178 citationsauthor #5
Whole-Genome Sequencing and Concordance Between Antimicrobial Susceptibility Genotypes and Phenotypes of Bacterial Isolates Associated with Bovine Respiratory Disease
201737 citationsauthor #12
The evolutionary basis of premature migration in Pacific salmon highlights the utility of genomics for informing conservation Authors and Affiliations
20162 citationsauthor #14
P6032 Identification and characterization of a novel pathogen causing bovine abortion
20160 citationsauthor #2
Genomic signatures of rapid adaptive evolution in the bluespotted cornetfish, a Mediterranean Lessepsian invader
201658 citationsauthor #4
Sequencing improves our ability to study threatened migratory species: Genetic population assignment in California's Central Valley Chinook salmon
201635 citationsauthor #5
Phylogenetics support an ancient common origin of two scientific icons: Devils Hole and Devils Hole pupfish
201624 citationsauthor #7
The evolutionary basis of premature migration in Pacific salmon highlights the utility of genomics for informing conservation
2016205 citationsauthor #9
P1018 Comparison of high-density SNP chip versus Rad sequencing in cattle and related species.
20162 citationsauthor #5
Genome Report: Identification and Validation of Antigenic Proteins from Pajaroellobacter abortibovis Using De Novo Genome Sequence Assembly and Reverse Vaccinology
201610 citationsauthor #2
Harnessing the power of RADseq for ecological and evolutionary genomics
20161,299 citationsauthor #3
RAD Capture (Rapture): Flexible and Efficient Sequence-Based Genotyping
2015407 citationsauthor #7
Parallel evolution of the summer steelhead ecotype in multiple populations from Oregon and Northern California
201521 citationsauthor #3
Genomics and introgression: discovery and mapping of thousands of species-diagnostic SNPs using RAD sequencing.
201539 citationsauthor #8
The development and characterization of a 57K single nucleotide polymorphism array for rainbow trout
2015202 citationsauthor #6
Trade‐offs and utility of alternative RADseq methods: Reply to Puritz et al.
201457 citationsauthor #3
A resource of single‐nucleotide polymorphisms for rainbow trout generated by restriction‐site associated DNA sequencing of doubled haploids
201458 citationsauthor #3
Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout
2014158 citationsauthor #2
Evaluating Adaptive Divergence Between Migratory and Nonmigratory Ecotypes of a Salmonid Fish, Oncorhynchus mykiss
201398 citationsauthor #4
Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired‐end RAD sequencing
2013198 citationsauthor #4
Thermal adaptation and acclimation of ectotherms from differing aquatic climates
2013177 citationsauthor #4
Genotyping‐by‐sequencing in ecological and conservation genomics
2013545 citationsauthor #4
Meiotic maps of sockeye salmon derived from massively parallel DNA sequencing
201262 citationsauthor #2
The fishes of Genome 10K.
201248 citationsauthor #4
Genetic Architecture of Migration-Related Traits in Rainbow and Steelhead Trout, Oncorhynchus mykiss
2012112 citationsauthor #4
Rapid Mapping and Identification of Mutations in Caenorhabditis elegans by Restriction Site-Associated DNA Mapping and Genomic Interval Pull-Down Sequencing
201117 citationsauthor #10
Mosaic analysis with double markers reveals tumor cell of origin in glioma.
2011659 citationsauthor #3
Rapid mapping and identification of mutations in C. elegans by RAD mapping and genomic interval pull-down sequencing
20111 citationsauthor #10
Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation.
200958 citationsauthor #3
RAD marker microarrays enable rapid mapping of zebrafish mutations
200774 citationsauthor #1
Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers.
2007975 citationsauthor #1
High-Density Detection of Restriction-Site-Associated DNA Markers for Rapid Mapping of Mutated Loci in Neurospora
200751 citationsauthor #4
Methods for identifying polymorphisms and polymorphism microarray
20060 citationsauthor #3
Preliminary characterization of bioreactivity of novel carbonaceous pitches extracted in N-methylpyrrolidone
19952 citationsauthor #6

TIMELINE

1995 2 citations

2006 0 citations

2007 1,100 citations

2009 58 citations

2011 677 citations

2012 222 citations

2013 1,018 citations

2014 273 citations

2015 669 citations

2016 1,635 citations

2017 85 citations

2018 524 citations

2019 64 citations

2020 115 citations

2021 0 citations

2022 40 citations

2024 4 citations

2025 0 citations

2026 0 citations

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