R. Lilien

PROFILE

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Aliases
R. H. Lilien, Ryan H. Lilien, Ryan Lilien, Ryan H Lilien
Publication record
47 papers · 1,534 citations · H-index 21

PAPERS

Clinical Prediction Rule for Patient Outcome after In-Hospital CPR
20150 citationsauthor #2
Clinical Prediction Rule for Patient Outcome after In-Hospital CPR: A New Model, Using Characteristics Present at Hospital Admission, to Identify Patients Unlikely to Benefit from CPR after In-Hospital Cardiac Arrest
201510 citationsauthor #2
OSPREY: protein design with ensembles, flexibility, and provable algorithms.
201329 citationsauthor #4
Efficient a Priori Identification of Drug Resistant Mutations Using Dead-End Elimination and MM-PBSA
201211 citationsauthor #2
Normalizing Molecular Docking Rankings using Virtually Generated Decoys
201110 citationsauthor #5
GUIDED APPLICATION OF MED CHEM RULES TO GENERATE 'GOOD' IDEAS
20110 citationsauthor #4
Virtual Decoy Sets for Molecular Docking Benchmarks
201159 citationsauthor #2
Applying Medicinal Chemistry Transformations and Multiparameter Optimization to Guide the Search for High-Quality Leads and Candidates
201130 citationsauthor #4
advanced capabilities to generate ‘good’ ideas
20110 citationsauthor #4
A Bayesian method for 3D macromolecular structure inference using class average images from single particle electron microscopy
201025 citationsauthor #4
LigAlign: flexible ligand-based active site alignment and analysis.
201047 citationsauthor #2
A Structure-Based Approach for Mapping Adverse Drug Reactions to the Perturbation of Underlying Biological Pathways
201059 citationsauthor #3
The protein-small-molecule database, a non-redundant structural resource for the analysis of protein-ligand binding
200954 citationsauthor #2
Predicting Multiple Ligand Binding Modes Using Self-Consistent Pharmacophore Hypotheses
20097 citationsauthor #2
Restricted dead‐end elimination: Protein redesign with a bounded number of residue mutations
20093 citationsauthor #2
Prediction of sub-cavity binding preferences using an adaptive physicochemical structure representation
200921 citationsauthor #2
The minimized dead‐end elimination criterion and its application to protein redesign in a hybrid scoring and search algorithm for computing partition functions over molecular ensembles
200884 citationsauthor #2
Adapting a single-user, single-display molecular visualization application for use in a multi-user, multi-display environment
200849 citationsauthor #2
Allosteric inhibition of the protein-protein interaction between the leukemia-associated proteins Runx1 and CBFbeta.
2007129 citationsauthor #13
Redesigning the PheA domain of gramicidin synthetase leads to a new understanding of the enzyme's mechanism and selectivity.
200677 citationsauthor #2
Improved Pruning algorithms and Divide-and-Conquer strategies for Dead-End Elimination, with application to protein design
200661 citationsauthor #2
A Novel Minimized Dead-End Elimination Criterion and Its Application to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing Partition Functions over Molecular Ensembles
200670 citationsauthor #2
High-throughput inference of protein-protein interfaces from unassigned NMR data
20055 citationsauthor #2
High-Throughput Inference of Protein-Protein Interaction Sites High-Throughput Inference of Protein-Protein Interaction Sites from Unassigned NMR Data by Analyzing Arrangements Induced from Unassigned NMR Data by Analyzing Arrangements Induced By Quadratic Forms on 3-Manifolds By Quadratic Forms on
20051 citationsauthor #2
A subgroup algorithm to identify cross-rotation peaks consistent with non-crystallographic symmetry.
20041 citationsauthor #1
Identification of Novel Small Molecule Inhibitors of Core-Binding Identification of Novel Small Molecule Inhibitors of Core-Binding Factor Dimerization by Computational Screening against NMR Factor Dimerization by Computational Screening against NMR Molecular Ensemble Molecular Ensemble
20041 citationsauthor #1
PHYLOGENETIC CLASSIFICATION OF PROTOZOA BASED ON THE STRUCTURE OF THE LINKER DOMAIN IN THE BIFUNCTIONAL ENZYME, DIHYDORFOLATE REDUCTASE-THYMIDYLATE SNYTHASE
20040 citationsauthor #2
A Novel Ensemble-Based Scoring and Search Algorithm for Protein Redesign and Its Application to Modify the Substrate Specificity of the Gramicidin Synthetase A Phenylalanine Adenylation Enzyme
2004129 citationsauthor #1
Novel algorithms for structural molecular biology and proteomics
20041 citationsauthor #1
Optimization and dynamics of protein–protein complexes using B‐splines
200410 citationsauthor #2
The Crystal Structure of Dihydrofolate Reductase-Thymidylate Synthase from Cryptosporidium hominis Reveals a Novel Architecture for the Bifunctional Enzyme
20032 citationsauthor #2
An exact algorithm for determining protein backbone structure from NH residual dipolar couplings
20033 citationsauthor #3
Phylogenetic Classification of Protozoa Based on the Structure of the Linker Domain in the Bifunctional Enzyme, Dihydrofolate Reductase-Thymidylate Synthase*
200361 citationsauthor #2
A Polynomial-Time Nuclear Vector Replacement Algorithm for Automated NMR Resonance Assignments
200357 citationsauthor #3
The Crystal Structure of Dihydrofolate Reductase‐Thymidylate Synthase from Cryptosporidium hominis Reveals a Novel Architecture for the Bifunctional Enzyme
200315 citationsauthor #2
Hemopericardium and Cardiac Tamponade as Presenting Findings of Dexamethasone-Induced Hypertrophic Cardiomyopathy Complicated by Transmural Myocardial Infarction
20036 citationsauthor #2
Probabilistic Disease Classification of Expression-Dependent Proteomic Data from Mass Spectrometry of Human Serum
2003185 citationsauthor #1
Crystal structure of DHFR-TS from Cryptosporidium hominis
20031 citationsauthor #2
Modeling Protein Flexibility for Structure-Based Active Site Redesign
20021 citationsauthor #1
Approaches to modeling protein flexibility during drug design
20020 citationsauthor #3
Physical geometric algorithms for structural molecular biology
20015 citationsauthor #4
View-Based Recognition Using an Eigenspace Approximation to the Hausdorff Measure
199979 citationsauthor #2
Molecular Docking with a View: The Integration of a Monte Carlo Docking Program into a Virtual Reality Environment
19981 citationsauthor #3
Approximate Hausdorff Matching Using Eigenspaces
19965 citationsauthor #2
Object Recognition Using Subspace Methods
199623 citationsauthor #2
Osprey: Protein Design with Ensembles, Flexibility, and Provable Algorithms
year unknown103 citationsauthor #4
Electronic Reprint Biological Crystallography a Subgroup Algorithm to Identify Cross-rotation Peaks Consistent with Non-crystallographic Symmetry Biological Crystallography a Subgroup Algorithm to Identify Cross-rotation Peaks Consistent with Non-crystallographic Symmetry
year unknown2 citationsauthor #1

TIMELINE

1996 28 citations

1998 1 citations

1999 79 citations

2001 5 citations

2002 1 citations

2003 330 citations

2004 142 citations

2005 6 citations

2006 208 citations

2007 129 citations

2008 133 citations

2009 85 citations

2010 131 citations

2011 99 citations

2012 11 citations

2013 29 citations

2015 10 citations

Unknown 105 citations

R. Lilien

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