Kathleen M. Jagodnik

PROFILE

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Aliases
Kathleen Jagodnik, Kathleen M Jagodnik, Kathleen M. Jagodnik
Publication record
66 papers · 13,896 citations · H-index 24

PAPERS

LIT-GRAPH: Evaluating Deep vs. Shallow Graph Embeddings for High-Quality Text Recommendation in Domain-Specific Knowledge Graphs
20260 citationsauthor #3
Abstract 1086: Introducing the Florida Cancer Research (FL CARES) Network and the Platform for Accelerating Collaborative Computational Cancer Research (PAC3R)
20250 citationsauthor #9
Targeted Research and Treatment Implications in Women With Depression.
20251 citationsauthor #2
DruGNNosis-MoA: Elucidating Drug Mechanisms as Etiological or Palliative With Graph Neural Networks Employing a Large Language Model
20252 citationsauthor #3
Utilizing AI and Social Media Analytics to Discover Unreported Adverse Side Effects of GLP-1 Receptor Agonists Used for Obesity Treatment
20250 citationsauthor #2
Abstract 1081: Sylvester Data Portal: Streamlined access to standardized clinicogenomic data
20250 citationsauthor #9
Abstract 1052: Integrating geographical and socioeconomic data with genomic information for enhanced prediction of cancer risk using large language models and knowledge graphs
20250 citationsauthor #3
AI and narrative embeddings detect PTSD following childbirth via birth stories
202423 citationsauthor #2
Persistence of collective memory of corporate bankruptcy events discussed on X (Twitter) is influenced by pre-bankruptcy public attention
20243 citationsauthor #1
Utilizing AI and Social Media Analytics to Discover Adverse Side Effects of GLP-1 Receptor Agonists
20248 citationsauthor #2
The Psychedelic Future of Post-Traumatic Stress Disorder Treatment
202331 citationsauthor #2
Preventing Post-Traumatic Stress Disorder following Childbirth: A Systematic Review and Meta-Analysis.
202322 citationsauthor #7
Establishing the Validity of a Diagnostic Questionnaire for Childbirth-related Post-traumatic Stress Disorder.
202323 citationsauthor #6
Screening for Post-Traumatic Stress Disorder following Childbirth using the Peritraumatic Distress Inventory
20238 citationsauthor #1
OpenAI’s Narrative Embeddings Can Be Used for Detecting Post-Traumatic Stress Following Childbirth Via Birth Stories
20236 citationsauthor #2
HetIG-PreDiG: A Heterogeneous Integrated Graph Model for Predicting Human Disease Genes based on gene expression
20235 citationsauthor #1
A Systematic Review of Interventions for Prevention and Treatment of Post-Traumatic Stress Disorder Following Childbirth
20235 citationsauthor #4
D2H2: diabetes data and hypothesis hub
20231 citationsauthor #4
The role of the hypothalamic-pituitary-adrenal axis in depression across the female reproductive lifecycle: current knowledge and future directions
202368 citationsauthor #2
Screening for post-traumatic stress disorder following childbirth using the Peritraumatic Distress Inventory.
20239 citationsauthor #1
Getting Started with LINCS Datasets and Tools
202224 citationsauthor #4
Progress in and Opportunities for Applying Information Theory to Computational Biology and Bioinformatics
20226 citationsauthor #2
Manuscript Title: Identifying Women with Post-Delivery Posttraumatic Stress Disorder using Natural Language Processing of Personal Childbirth Narratives
20228 citationsauthor #2
DrugShot: querying biomedical search terms to retrieve prioritized lists of small molecules
20225 citationsauthor #5
SigCom LINCS: data and metadata search engine for a million gene expression signatures
202226 citationsauthor #7
Identifying Women with Post-Delivery Posttraumatic Stress Disorder using Natural Language Processing of Personal Childbirth Narratives.
202230 citationsauthor #2
Appyters: Turning Jupyter Notebooks into data-driven web apps
2021102 citationsauthor #19
Gene Set Knowledge Discovery with Enrichr
20212,573 citationsauthor #10
Role-Aware Information Spread in Online Social Networks
202110 citationsauthor #2
Drugmonizome and Drugmonizome-ML: integration and abstraction of small molecule attributes for drug enrichment analysis and machine learning
202118 citationsauthor #8
Prioritizing Pain-Associated Targets with Machine Learning.
202113 citationsauthor #2
Correcting under-reported COVID-19 case numbers: estimating the true scale of the pandemic
2020107 citationsauthor #2
The COVID-19 Drug and Gene Set Library
202065 citationsauthor #5
EnrichrBot: Twitter bot tracking tweets about human genes
20204 citationsauthor #5
The COVID-19 Gene and Drug Set Library
202025 citationsauthor #4
Connectivity Mapping: Methods and Applications
201944 citationsauthor #4
Effect of Loading Configuration on Kinematics and Kinetics for Deadlift and Squat Exercises: Case Study in Modeling Exercise Countermeasure Device for Astronauts
20191 citationsauthor #5
FAIRshake: toolkit to evaluate the findability, accessibility, interoperability, and reusability of research digital resources
201911 citationsauthor #6
FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources.
201955 citationsauthor #6
ChEA3: transcription factor enrichment analysis by orthogonal omics integration
20194 citationsauthor #7
Datasets2Tools, repository and search engine for bioinformatics datasets, tools and canned analyses
201813 citationsauthor #3
Drug Gene Budger (DGB): an application for ranking drugs to modulate a specific gene based on transcriptomic signatures
201840 citationsauthor #4
Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center
201825 citationsauthor #5
smartAPI: Towards a More Intelligent Network of Web APIs
201741 citationsauthor #9
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop
201730 citationsauthor #1
Biomechanical Modeling Analysis of Loads Configuration for Squat Exercise
20170 citationsauthor #4
The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations.
2017352 citationsauthor #3
Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data
2017161 citationsauthor #13
Training an Actor-Critic Reinforcement Learning Controller for Arm Movement Using Human-Generated Rewards
201756 citationsauthor #1
Massive mining of publicly available RNA-seq data from human and mouse
2017633 citationsauthor #4
The SmartAPI Ecosystem for Making Web APIs FAIR
20177 citationsauthor #7
Biomechanical Modeling of the Deadlift Exercise to Improve the Efficacy of Resistive Exercise Microgravity Countermeasures
20160 citationsauthor #1
Biomechanical Modeling of Split-leg Squat and Heel Raise on the Hybrid Ultimate Lifting Kit (HULK)
20160 citationsauthor #4
Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
20168,837 citationsauthor #9
GEN3VA: aggregation and analysis of gene expression signatures from related studies
201620 citationsauthor #2
Biomechanical Modeling of the Deadlift Exercise on the HULK Device to Improve the Efficacy of Resistive Exercise Microgravity Countermeasures
20160 citationsauthor #1
Squat Biomechanical Modeling Results from Exercising on the Hybrid Ultimate Lifting Kit
20161 citationsauthor #4
Supplementing biomechanical modeling with EMG analysis
20161 citationsauthor #2
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd
2016233 citationsauthor #3
Human-Like Rewards to Train a Reinforcement Learning Controller for Planar Arm Movement
201621 citationsauthor #1
An optimized proportional-derivative controller for the human upper extremity with gravity.
201514 citationsauthor #1
Reinforcement Learning and Feedback Control for High-Level Upper-Extremity Neuroprostheses
20147 citationsauthor #1
Optimization and evaluation of a proportional derivative controller for planar arm movement.
201057 citationsauthor #1
Application of the Actor-Critic Architecture to Functional Electrical Stimulation Control of a Human Arm
200931 citationsauthor #3
Creating a Reinforcement Learning Controller for Functional Electrical Stimulation of a Human Arm.
200815 citationsauthor #4
FES Control of a Human Arm Using Reinforcement Learning *
year unknown2 citationsauthor #4

TIMELINE

2008 15 citations

2009 31 citations

2010 57 citations

2014 7 citations

2015 14 citations

2016 9,113 citations

2017 1,280 citations

2018 78 citations

2019 115 citations

2020 201 citations

2021 2,716 citations

2022 99 citations

2023 178 citations

2024 34 citations

2025 3 citations

2026 0 citations

Unknown 2 citations

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