Xiaoxia Ma

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Aliases
Xiao-xia Ma, Xiaoxia Ma, Xiaoxiao Ma
Publication record
52 papers · 1,056 citations · H-index 18

PAPERS

Involvement of genomic variations and m6A modification in differential gene expression related to environmental responses: a subspecies-level study in plants
20260 citationsauthor #8
An organ‐specific transcriptome atlas of Curcuma wenyujin: MicroRNAs, phasiRNAs, and metabolic pathways
20252 citationsauthor #1
Genome-wide identification of phasiRNAs in Arabidopsis thaliana, and insights into biogenesis, temperature sensitivity, and organ specificity.
20242 citationsauthor #2
The novel activity of Argonautes in intron splicing: A transcriptome-wide survey in plants.
20225 citationsauthor #2
An organ‐specific transcriptomic atlas of the medicinal plant Bletilla striata: Protein‐coding genes, microRNAs, and regulatory networks
20227 citationsauthor #1
Creating and maintaining a high-confidence microRNA repository for crop research: A brief review and re-examination of the current crop microRNA registries.
20222 citationsauthor #2
Organ-specific, integrated omics data-based study on the metabolic pathways of the medicinal plant Bletilla striata (Orchidaceae)
202118 citationsauthor #1
Organ-specific, integrated omics data-based study on the metabolic pathways of the medicinal plant Bletilla striata (Orchidaceae)
20211 citationsauthor #1
The RNA degradome: a precious resource for deciphering RNA processing and regulation codes in plants
202012 citationsauthor #1
PmiRDiscVali: an integrated pipeline for plant microRNA discovery and validation
201914 citationsauthor #4
Deciphering the non-coding RNA-level response to arsenic stress in rice (Oryza sativa)
201924 citationsauthor #5
Bioinformatics-assisted, integrated omics studies on medicinal plants
201937 citationsauthor #1
MepmiRDB: a medicinal plant microRNA database
201922 citationsauthor #4
Transcriptome-wide identification and functional investigation of the RDR2- and DCL3-dependent small RNAs encoded by long non-coding RNAs in Arabidopsis thaliana
20192 citationsauthor #4
Transcriptome-wide identification and characterization of the copper and cadmium stress-responsive small RNAs and their targets in Arabidopsis thaliana
20188 citationsauthor #1
The expanding roles of Argonautes: RNA interference, splicing and beyond.
201810 citationsauthor #1
Ectopic expression of SaNRAMP3 from Sedum alfredii enhanced cadmium root-to-shoot transport in Brassica juncea.
201840 citationsauthor #7
SaZIP4, an uptake transporter of Zn/Cd hyperaccumulator Sedum alfredii Hance
201856 citationsauthor #2
Classification of Transcription Boundary-Associated RNAs (TBARs) in Animals and Plants
201816 citationsauthor #2
Tracking microRNA Processing Signals by Degradome Sequencing Data Analysis
201811 citationsauthor #5
Transcriptome-Wide Discovery of PASRs (Promoter-Associated Small RNAs) and TASRs (Terminus-Associated Small RNAs) in Arabidopsis thaliana
201711 citationsauthor #1
Enhanced Cd extraction of oilseed rape (Brassica napus) by plant growth-promoting bacteria isolated from Cd hyperaccumulator Sedum alfredii Hance
201770 citationsauthor #8
Myrf ER-Bound Transcription Factors Drive C. elegans Synaptic Plasticity via Cleavage-Dependent Nuclear Translocation.
201734 citationsauthor #2
Bioinformatics resources for deciphering the biogenesis and action pathways of plant small RNAs
201717 citationsauthor #2
Investigating microRNA-mediated regulation of the nascent nuclear transcripts in plants: a bioinformatics workflow
20174 citationsauthor #4
Investigating the regulatory roles of the microRNAs and the Argonaute 1-enriched small RNAs in plant metabolism.
20173 citationsauthor #3
A transcriptome-wide study on the microRNA- and the Argonaute 1-enriched small RNA-mediated regulatory networks involved in plant leaf senescence.
201615 citationsauthor #2
Iron Translocation in Two Grain Concentration Contrasting Rice (Oryza Sativa L. Indica) Genotypes
20151 citationsauthor #2
The use of high-throughput sequencing methods for plant microRNA research
201549 citationsauthor #1
Construction of regulatory networks mediated by small RNAs responsive to abiotic stresses in rice (Oryza sativa)
20158 citationsauthor #2
Intronic regions of plant genes potentially encode RDR (RNA-dependent RNA polymerase)-dependent small RNAs.
20154 citationsauthor #2
An endophytic bacterium Acinetobacter calcoaceticus Sasm3-enhanced phytoremediation of nitrate–cadmium compound polluted soil by intercropping Sedum alfredii with oilseed rape
201535 citationsauthor #2
MicroRNA*s in apple (Malus domestica): biological implications obtained from high-throughput sequencing data.
20140 citationsauthor #2
Is Argonaute 1 the only effective slicer of small RNA-mediated regulation of gene expression in plants?
201412 citationsauthor #3
SNP or RNA editing?
20141 citationsauthor #2
Long non-coding RNAs
201440 citationsauthor #1
Construction of small RNA-mediated gene regulatory networks in the roots of rice (Oryza sativa)
201325 citationsauthor #1
Construction of gene regulatory networks mediated by vegetative and reproductive stage-specific small RNAs in rice (Oryza sativa).
201318 citationsauthor #4
Identification of the highly accumulated microRNA*s in Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa).
201314 citationsauthor #2
Introns targeted by plant microRNAs: a possible novel mechanism of gene regulation
20130 citationsauthor #3
Introns targeted by plant microRNAs: a possible novel mechanism of gene regulation
201349 citationsauthor #3
SNP or RNA editing?
20130 citationsauthor #2
Construction of small RNA-mediated gene regulatory networks in the roots of rice (Oryza sativa)
20130 citationsauthor #1
Expression-Based Functional Investigation of the Organ-Specific MicroRNAs in Arabidopsis
201218 citationsauthor #3
Genome-Wide Identification of Reverse Complementary microRNA Genes in Plants
20128 citationsauthor #2
Characterization of expression patterns of small RNAs among various organs in Arabidopsis and rice based on 454 platform-generated high-throughput sequencing data.
20124 citationsauthor #2
OsCAND1 is required for crown root emergence in rice.
201178 citationsauthor #3
MicroRNA-mediated signaling involved in plant root development.
2010153 citationsauthor #2
Small RNAs in angiosperms: sequence characteristics, distribution and generation
201024 citationsauthor #3
Mechanisms of microRNA-mediated auxin signaling inferred from the rice mutant osaxr
201036 citationsauthor #3
A rice stromal processing peptidase regulates chloroplast and root development.
201029 citationsauthor #4
VIRS: A visual tool for identifying restriction sites in multiple DNA sequences
20097 citationsauthor #3

TIMELINE

2009 7 citations

2010 242 citations

2011 78 citations

2012 30 citations

2013 106 citations

2014 53 citations

2015 97 citations

2016 15 citations

2017 139 citations

2018 141 citations

2019 99 citations

2020 12 citations

2021 19 citations

2022 14 citations

2024 2 citations

2025 2 citations

2026 0 citations

Xiaoxia Ma

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