Michelle C. Stitzer

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Aliases
Michelle C Stitzer, Michelle Stitzer
Publication record
49 papers · 2,848 citations · H-index 20

PAPERS

High-Quality Draft Genome Assemblies and Comparative Genomics of Three Bouteloua Species (Poaceae: Chloridoideae)
20250 citationsauthor #5
Extensive modulation of a conserved cis-regulatory code across 589 grass species
20251 citationsauthor #15
GeneCAD: Plant Genome Annotation with a DNA Foundation Model
20250 citationsauthor #4
Cross-species modeling of plant genomes at single-nucleotide resolution using a pretrained DNA language model
202517 citationsauthor #9
The origins and adaptive consequences of polyploidy in a dominant prairie grass
20250 citationsauthor #4
Identification of Freezing Tolerance QTLs in Tripsacum dactyloides Using Open-Pollinated Bulk Segregant Analysis
20250 citationsauthor #6
Widespread turnover of a conserved cis-regulatory code across 589 grass species
20250 citationsauthor #15
Extensive genome evolution distinguishes maize within a stable tribe of grasses
202512 citationsauthor #1
Cross-species modeling of plant genomes at single nucleotide resolution using a pre-trained DNA language model
202413 citationsauthor #9
Evolutionary signatures of the erosion of sexual reproduction genes in domesticated cassava (Manihot esculenta)
20242 citationsauthor #2
Muller’s Ratchet in Action: The Erosion of Sexual Reproduction Genes in Domesticated Cassava (Manihot esculenta)
20240 citationsauthor #2
Correction: Double triage to identify poorly annotated genes in maize: The missing link in community curation
20240 citationsauthor #7
Maize and wild relatives show distinct patterns of genome downsizing following polyploidy
20240 citationsauthor #4
Two teosintes made modern maize
202395 citationsauthor #24
Combined analysis of transposable elements and structural variation in maize genomes reveals genome contraction outpaces expansion
202318 citationsauthor #3
New whole-genome alignment tools are needed for tapping into plant diversity.
202339 citationsauthor #3
Transposable element abundance subtly contributes to lower fitness in maize
20235 citationsauthor #1
Fishing for a reelGene: evaluating gene models with evolution and machine learning
20231 citationsauthor #15
A multiple alignment workflow shows the effect of repeat masking and parameter tuning on alignment in plants
20227 citationsauthor #5
Adaptive significance of flowering time variation across natural seasonal environments in Arabidopsis thaliana.
202224 citationsauthor #5
Using high-throughput multiple optical phenotyping to decipher the genetic architecture of maize drought tolerance
202188 citationsauthor #18
AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication
202168 citationsauthor #6
AnchorWave: sensitive alignment of genomes with high diversity, structural polymorphism and whole-genome duplication variation
20213 citationsauthor #6
Controlling for Variable Transposition Rate with an Age-Adjusted Site Frequency Spectrum
20216 citationsauthor #3
A multiple genome alignment workflow shows the impact of repeat masking and parameter tuning on alignment of functional regions in plants
20212 citationsauthor #5
Functional variants of DOG1 control seed chilling responses and variation in seasonal life-history strategies in Arabidopsis thaliana
202068 citationsauthor #2
US-4846-15 C Investigation of growth regulation by maize benzoxazinoid breakdown products
20200 citationsauthor #30
The genome-wide dynamics of purging during selfing in maize
201948 citationsauthor #6
Double triage to identify poorly annotated genes in maize: The missing link in community curation
201931 citationsauthor #7
Monitoring the interplay between transposable element families and DNA methylation in maize
201959 citationsauthor #7
The Genomics of Selfing in Maize (Zea mays ssp. mays): Catching Purging in the Act
20195 citationsauthor #6
Transposable elements contribute to dynamic genome content in maize
201997 citationsauthor #2
Dynamic Patterns of Transcript Abundance of Transposable Element Families in Maize
201935 citationsauthor #2
The genomic ecosystem of transposable elements in maize
2019121 citationsauthor #1
Hybrid Decay: A Transgenerational Epigenetic Decline in Vigor and Viability Triggered in Backcross Populations of Teosinte with Maize
20199 citationsauthor #11
Maize domestication and gene interaction.
201889 citationsauthor #1
The maize W22 genome provides a foundation for functional genomics and transposon biology
2018190 citationsauthor #44
A Kinesin-14 Motor Activates Neocentromeres to Promote Meiotic Drive in Maize.
2018102 citationsauthor #4
Adaptation in plant genomes: Bigger is different.
201859 citationsauthor #4
Digest: Hybrid incompatibilities and introgression in wild monkeyflowers *
20180 citationsauthor #1
Adaptation in plant genomes: bigger is different
20172 citationsauthor #4
Improved maize reference genome with single-molecule technologies
20171,048 citationsauthor #5
Adaptation in plant genomes: bigger isn't better, but it's probably different
20172 citationsauthor #4
The complex sequence landscape of maize revealed by single molecule technologies
201613 citationsauthor #5
Broader Impacts of the Proposed Work
20150 citationsauthor #4
Transposable Elements Contribute to Activation of Maize Genes in Response to Abiotic Stress
201582 citationsauthor #4
Correction: Transposable Elements Contribute to Activation of Maize Genes in Response to Abiotic Stress
201554 citationsauthor #4
Transposable elements contribute to activation of maize genes in response to abiotic stress
2014338 citationsauthor #4
Transposable elements contribute to dynamic genome content in maize 1
year unknown1 citationsauthor #2

TIMELINE

2014 338 citations

2015 136 citations

2016 13 citations

2017 1,052 citations

2018 440 citations

2019 405 citations

2020 68 citations

2021 167 citations

2022 31 citations

2023 158 citations

2024 15 citations

2025 30 citations

Unknown 1 citations

Michelle C. Stitzer

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PAPERS

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