Modeling of cellular processes: methods, data, and requirements.

No abstract is available for this paper.

• Publication year

  2011

• Venue

  Methods in molecular biology

• Publication date

  Unknown publication date

• Fields of study

  Biology, Medicine, Computer Science

• Identifiers
  DOI 10.1007/978-1-60761-987-1_27PMID 21063964
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Nonlinear Ordinary Differential Equations

  2013cited by this paper
• Stochastic approaches in systems biology

  2010cited by this paper
• Question & Answer Q & A : Systems biology

  2009cited by this paper
• Reaction-diffusion waves in biology.

  2009cited by this paper
• Robust yet flexible

  2009cited by this paper
• Stochastic simulation of signal transduction: impact of the cellular architecture on diffusion.

  2009cited by this paper
• Stochastic switching as a survival strategy in fluctuating environments

  2008cited by this paper
• Stochastic switching to competence.

  2008cited by this paper
• Investigating the two-moment characterisation of subcellular biochemical networks.

  2008cited by this paper
• Power-law models of signal transduction pathways.

  2007cited by this paper
• Towards a theory of biological robustness

  2007cited by this paper
• K-leap method for accelerating stochastic simulation of coupled chemical reactions.

  2007cited by this paper
• Classical versus stochastic kinetics modeling of biochemical reaction systems.

  2007cited by this paper
• Exact stochastic simulation of coupled chemical reactions with delays.

  2007cited by this paper
• Mass fluctuation kinetics: capturing stochastic effects in systems of chemical reactions through coupled mean-variance computations.

  2007cited by this paper
• Parameter Estimation for Scientists and Engineers

  2007cited by this paper
• Efficient step size selection for the tau-leaping simulation method.

  2006cited by this paper
• The Finite Element Method: Its Basis and Fundamentals

  2005cited by this paper
• Data Analysis Using the Method of Least Squares: Extracting the Most Information from Experiments

  2005cited by this paper
• Systems Biology: Its Practice and Challenges

  2005cited by this paper
• Systems biology: will it work?

  2005cited by this paper
• Systems biology 101—what you need to know

  2004cited by this paper
• Introduction to Chemical Kinetics

  2004cited by this paper
• Robustness of Cellular Functions

  2004cited by this paper
• An Introduction to Chemical Kinetics: Wright/An Introduction to Chemical Kinetics

  2004cited by this paper
• Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell.

  2003cited by this paper
• Differential Equations, Dynamical Systems, and an Introduction to Chaos

  2003cited by this paper
• Molecular dynamics simulation for ligand-receptor studies. Carbohydrates interactions in aqueous solutions.

  2002cited by this paper
• Molecular dynamics simulations of biological reactions.

  2002cited by this paper
• Stochastic resonance in biology. How noise can enhance detection of weak signals and help improve biological information processing.

  2002cited by this paper
• Molecular dynamics simulations of biomolecules

  2002cited by this paper
• Metabolic control analysis in a nutshell

  2001cited by this paper
• Approximate accelerated stochastic simulation of chemically reacting systems

  2001cited by this paper
• Stochastic focusing: fluctuation-enhanced sensitivity of intracellular regulation.

  2000cited by this paper
• Computational Analysis of Biochemical Systems: A Practical Guide for Biochemists and Molecular Biologists

  2000cited by this paper
• Efficient Exact Stochastic Simulation of Chemical Systems with Many Species and Many Channels

  2000cited by this paper
• Compartmental modeling with networks

  1999cited by this paper
• Nonlinear Systems: Analysis, Stability, and Control

  1999cited by this paper
• Elements of applied bifurcation theory (2nd ed.)

  1998cited by this paper
• Many-body tree methods in physics

  1996cited by this paper
• The Regulation of Cellular Systems

  1996cited by this paper
• Tuning in to Noise

  1996cited by this paper
• Pursuing Laplace's vision on modern computers

  1996cited by this paper
• Nonlinear Dynamics and Chaos: With Applications to Physics, Biology, Chemistry and Engineering

  1995cited by this paper
• Molecular dynamics simulation : elementary methods / J.M. Haile

  1992cited by this paper
• Linear Algebra and Ordinary Differential Equations

  1991cited by this paper
• Mathematical Control Theory: Deterministic Finite Dimensional Systems

  1990cited by this paper
• Numerical solution of partial differential equations by the finite element method

  1990cited by this paper
• Computer Simulation of Liquids

  1988cited by this paper
• The art of control engineering

  1988cited by this paper
• Stochastic differential equations : an introduction with applications

  1987cited by this paper
• Handbook of stochastic methods - for physics, chemistry and the natural sciences, Second Edition

  1986cited by this paper
• Diffusion: Mass Transfer in Fluid Systems

  1984cited by this paper
• Compartmental Models and Their Application

  1983cited by this paper
• An Introduction to Statistical Physics

  1982cited by this paper
• Stochastic processes in physics and chemistry

  1981cited by this paper
• H. Haken, Synergetics. An Introduction. Nonequilibrium Phase Transitions and Self-Organization in Physics, Chemistry, and Biology (2nd Edition). XI + 355 S., 152 Abb. Berlin—Heidelberg—New York 1978. Springer-Verlag. DM 66,00

  1980cited by this paper
• Fundamentals of Enzyme Kinetics

  1979cited by this paper
• Exact Stochastic Simulation of Coupled Chemical Reactions

  1977cited by this paper
• On stability of steady states

  1971cited by this paper
• Biochemical systems analysis. II. The steady-state solutions for an n-pool system using a power-law approximation.

  1969cited by this paper
• Systems Theory and Biology

  1968cited by this paper
• On the interpretation of the pH variation of the maximum initial velocity of an enzyme-catalyzed reaction.

  1954cited by this paper
• What is life? : the physical aspect of the living cell

  1946cited by this paper
• Fluctuations in the Abundance of a Species considered Mathematically

  1926cited by this paper

• Angiogenic Activity of Breast Cancer Patients’ Monocytes Reverted by Combined Use of Systems Modeling and Experimental Approaches

  2015cites this paper
• Integration of Boolean models exemplified on hepatocyte signal transduction

  2012cites this paper