Integration of a splicing regulatory network within the meiotic gene expression program of Saccharomyces cerevisiae.

No abstract is available for this paper.

• Publication year

  2010

• Venue

  Genes & Development

• Publication date

  2010-12-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1101/gad.1977410PMID 21123654PMCID PMC2994042
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy

  2010cited by this paper
• Removal of DNA from RNA.

  2010cited by this paper
• RNA: A Laboratory Manual

  2010cited by this paper
• The anaphase promoting complex targeting subunit Ama1 links meiotic exit to cytokinesis during sporulation in Saccharomyces cerevisiae.

  2009cited by this paper
• Sex-Specific Splicing in Drosophila: Widespread Occurrence, Tissue Specificity and Evolutionary Conservation

  2009cited by this paper
• Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2.

  2008cited by this paper
• Snu56p Is Required for Mer1p-Activated Meiotic Splicing

  2008cited by this paper
• High-density yeast-tiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing

  2007influential reference
• Genome-Wide Identification of Alternatively Spliced mRNA Targets of Specific RNA-Binding Proteins

  2007cited by this paper
• Gene regulation: gene control network in development.

  2007cited by this paper
• ZMM proteins during meiosis: Crossover artists at work

  2007cited by this paper
• Checking your breaks: surveillance mechanisms of meiotic recombination.

  2006cited by this paper
• The meiosis-specific zip4 protein regulates crossover distribution by promoting synaptonemal complex formation together with zip2.

  2006cited by this paper
• Saccharomyces cerevisiae Mer2, Mei4 and Rec114 Form a Complex Required for Meiotic Double-Strand Break Formation

  2006cited by this paper
• Mnd2, an essential antagonist of the anaphase-promoting complex during meiotic prophase.

  2005cited by this paper
• The yeast APC/C subunit Mnd2 prevents premature sister chromatid separation triggered by the meiosis-specific APC/C-Ama1.

  2005cited by this paper
• Exploring functional relationships between components of the gene expression machinery

  2005cited by this paper
• Java Treeview - extensible visualization of microarray data

  2004cited by this paper
• The Signal from the Initiation of Meiotic Recombination to the First Division of Meiosis

  2004cited by this paper
• Transcriptional regulatory code of a eukaryotic genome

  2004cited by this paper
• Morphogenetic Pathway of Spore Wall Assembly in Saccharomyces cerevisiae

  2004cited by this paper
• Open source clustering software.

  2004cited by this paper
• Mer1p is a modular splicing factor whose function depends on the conserved U2 snRNP protein Snu17p

  2004cited by this paper
• Saccharomyces cerevisiae Mer3 helicase stimulates 3'-5' heteroduplex extension by Rad51; implications for crossover control in meiotic recombination.

  2004cited by this paper
• Mechanisms of alternative pre-messenger RNA splicing.

  2003cited by this paper
• Polo-like kinase Cdc5 promotes chiasmata formation and cosegregation of sister centromeres at meiosis I

  2003cited by this paper
• RNA Binding Protein Sex-Lethal (Sxl) and Control of Drosophila Sex Determination and Dosage Compensation

  2003cited by this paper
• Transcriptional regulation of meiosis in budding yeast.

  2003cited by this paper
• CLIP Identifies Nova-Regulated RNA Networks in the Brain

  2003cited by this paper
• The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast

  2002influential reference
• Saccharomyces cerevisiae Mer3 Is a DNA Helicase Involved in Meiotic Crossing Over

  2002cited by this paper
• Genomewide Analysis of mRNA Processing in Yeast Using Splicing-Specific Microarrays

  2002cited by this paper
• Mechanism and control of meiotic recombination initiation.

  2001cited by this paper
• A screen for genes required for meiosis and spore formation based on whole-genome expression.

  2001cited by this paper
• Cdc28 Activates Exit from Mitosis in Budding Yeast

  2000cited by this paper
• Test of intron predictions reveals novel splice sites, alternatively spliced mRNAs and new introns in meiotically regulated genes of yeast.

  2000influential reference
• The core meiotic transcriptome in budding yeasts

  2000influential reference
• The pachytene checkpoint prevents accumulation and phosphorylation of the meiosis-specific transcription factor Ndt80.

  2000cited by this paper
• Ama1p is a meiosis-specific regulator of the anaphase promoting complex/cyclosome in yeast.

  2000cited by this paper
• A yeast intronic splicing enhancer and Nam8p are required for Mer1p-activated splicing.

  2000cited by this paper
• Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis.

  1999cited by this paper
• Interaction of the U1 snRNP with nonconserved intronic sequences affects 5' splice site selection.

  1999cited by this paper
• The Saccharomyces cerevisiae MER3 gene, encoding a novel helicase‐like protein, is required for crossover control in meiosis

  1999influential reference
• The pachytene checkpoint in S. cerevisiae depends on Swe1-mediated phosphorylation of the cyclin-dependent kinase Cdc28.

  1999cited by this paper
• Additional modules for versatile and economical PCR‐based gene deletion and modification in Saccharomyces cerevisiae

  1998cited by this paper
• A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins.

  1998cited by this paper
• The transcriptional program of sporulation in budding yeast.

  1998cited by this paper
• NDT80 and the Meiotic Recombination Checkpoint Regulate Expression of Middle Sporulation-Specific Genes in Saccharomyces cerevisiae

  1998cited by this paper
• Gametogenesis in yeast is regulated by a transcriptional cascade dependent on Ndt80.

  1998cited by this paper
• Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation.

  1998cited by this paper
• Cohesins: chromosomal proteins that prevent premature separation of sister chromatids.

  1997cited by this paper
• Meiotic chromosomes: it takes two to tango.

  1997cited by this paper
• Involvement of the MRE2 gene of yeast in formation of meiosis‐specific double‐strand breaks and crossover recombination through RNA splicing

  1997cited by this paper
• Heterologous HIS3 Marker and GFP Reporter Modules for PCR‐Targeting in Saccharomyces cerevisiae

  1997cited by this paper
• Meiotic chromosomes: it takes two to tango

  1997cited by this paper
• NDT80, a meiosis-specific gene required for exit from pachytene in Saccharomyces cerevisiae

  1995cited by this paper
• UME6 is a central component of a developmental regulatory switch controlling meiosis-specific gene expression.

  1995cited by this paper
• Binding of a cell-type-specific RNA splicing factor to its target regulatory sequence

  1995cited by this paper
• UME6 is a key regulator of nitrogen repression and meiotic development.

  1994influential reference
• The sporulation-specific enzymes encoded by the DIT1 and DIT2 genes catalyze a two-step reaction leading to a soluble LL-dityrosine-containing precursor of the yeast spore wall.

  1994cited by this paper
• Control of meiotic gene expression in Saccharomyces cerevisiae.

  1994cited by this paper
• Guide to yeast genetics and molecular biology

  1993cited by this paper
• TheNAM8 gene inSaccharomyces cerevisiae encodes a protein with putative RNA binding motifs and acts as a suppressor of mitochondrial splicing deficiencies when overexpressed

  1992cited by this paper
• Molecular and genetic analysis of the yeast early meiotic recombination genes REC102 and REC107/MER2

  1992cited by this paper
• Temporal comparison of recombination and synaptonemal complex formation during meiosis in S. cerevisiae.

  1991cited by this paper
• Meiosis-specific RNA splicing in yeast.

  1991cited by this paper
• Getting started with yeast.

  1991cited by this paper
• Nucleotide sequence and promoter analysis of SPO13, a meiosis-specific gene of Saccharomyces cerevisiae.

  1990cited by this paper
• Meiotic gene conversion and crossing over: their relationship to each other and to chromosome synapsis and segregation.

  1990cited by this paper
• MER1, a yeast gene required for chromosome pairing and genetic recombination, is induced in meiosis

  1990cited by this paper
• Sex in flies: the splice of life

  1989cited by this paper
• Yeast mer1 mutants display reduced levels of meiotic recombination.

  1989cited by this paper

• Control of gene output by intron RNA structure

  2025cites this paper
• An ancient competition for the conserved branchpoint sequence influences physiological and evolutionary outcomes in splicing

  2024cites this paper
• Mechanisms and regulation of spliceosome-mediated pre-mRNA splicing in Saccharomyces cerevisiae

  2024cites this paper
• Aberrant RNA splicing due to genetic incompatibilities in sunflower hybrids

  2021cites this paper
• The SR-protein Npl3 is an essential component of the meiotic splicing regulatory network in Saccharomyces cerevisiae

  2021influential citation
• Mechanisms coordinating ribosomal protein gene transcription in response to stress

  2020cites this paper
• A Functional Kinase Is Necessary for Cyclin-Dependent Kinase G1 (CDKG1) to Maintain Fertility at High Ambient Temperature in Arabidopsis

  2020cites this paper
• Mutagenesis of Snu114 domain IV identifies a developmental role in meiotic splicing

  2019influential citation
• Characterization of Pch2 localization determinants reveals a nucleolar-independent role in the meiotic recombination checkpoint

  2019cites this paper
• Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome

  2019cites this paper
• The chromatin remodeling complex Swi/Snf regulates splicing of meiotic transcripts in Saccharomyces cerevisiae

  2017influential citation
• Regulation of pre-mRNA splicing and mRNA degradation in Saccharomyces cerevisiae

  2017cites this paper
• An Ultraconserved Element (UCE) controls homeostatic splicing of ARGLU1 mRNA

  2016cites this paper
• Workflow for Genome-Wide Determination of Pre-mRNA Splicing Efficiency from Yeast RNA-seq Data

  2016cites this paper
• Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs

  2015cites this paper
• Characterization of pre-mRNA Dynamics and Structure throughout Spliceosome Assembly and Catalysis

  2015cites this paper
• BS69/ZMYND11 reads and connects histone H3.3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing.

  2014cites this paper
• Adventures in time and space

  2014cites this paper
• Illuminating the Transcriptome through the Genome

  2014cites this paper
• H2B ubiquitylation modulates spliceosome assembly and function in budding yeast

  2014cites this paper
• Quantification of pre-mRNA escape rate and synergy in splicing

  2014cites this paper
• Integration Of Splicing Regulation With Gene Expression Programs

  2013influential citation
• Rapid screening of yeast mutants with reporters identifies new splicing phenotypes

  2013cites this paper
• Competition by the masses.

  2013cites this paper
• The splicing landscape is globally reprogrammed during male meiosis

  2013cites this paper
• Competition between pre-mRNAs for the splicing machinery drives global regulation of splicing.

  2013influential citation
• Regulation of gene expression in mammalian nervous system through alternative pre-mRNA splicing coupled with RNA quality control mechanisms.

  2013cites this paper
• global regulation of splicing

  2013cites this paper
• RNA secondary structure mediates alternative 3'ss selection in Saccharomyces cerevisiae.

  2012cites this paper
• RNA Methylation by the MIS Complex Regulates a Cell Fate Decision in Yeast

  2012cites this paper
• An Integrated Regulatory Network Reveals Pervasive Cross-Regulation among Transcription and Splicing Factors

  2012cites this paper
• Cwc24p Is a General Saccharomyces cerevisiae Splicing Factor Required for the Stable U2 snRNP Binding to Primary Transcripts

  2012cites this paper
• Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention.

  2012cites this paper
• Genetic interactions of hypomorphic mutations in the m7G cap-binding pocket of yeast nuclear cap binding complex: an essential role for Cbc2 in meiosis via splicing of MER3 pre-mRNA.

  2012cites this paper
• A dominant role for meiosis-specific 3' RNA processing in controlling expression of a fission yeast cyclin gene.

  2012cites this paper
• Regulated pre-mRNA splicing: the ghostwriter of the eukaryotic genome.

  2012cites this paper
• Localization and Mutational Analysis of the Nuclear and Aggregation-Prone Ime4 Protein in Saccharomyces cerevisiae

  2012cites this paper
• Defining the Mer1 and Nam8 meiotic splicing regulons by cDNA rescue.

  2011influential citation
• Diverse environmental stresses elicit distinct responses at the level of pre-mRNA processing in yeast.

  2011cites this paper
• An essential role for trimethylguanosine RNA caps in Saccharomyces cerevisiae meiosis and their requirement for splicing of SAE3 and PCH2 meiotic pre-mRNAs

  2011cites this paper
• Sporulation in the Budding Yeast Saccharomyces cerevisiae

  2011influential citation
• Functional consequences of developmentally regulated alternative splicing

  2011cites this paper
• MIT Open Access Articles RNA Methylation by the MIS Complex Regulates a Cell Fate Decision in Yeast

  year unknowncites this paper