Sediment organic matter composition and dynamics in San Francisco Bay, California, USA: Seasonal variation and interactions between water column chlorophyll and the benthos

No abstract is available for this paper.

• Publication year

  2006

• Venue

  Estuarine Coastal and Shelf Science

• Publication date

  2006-02-01

• Fields of study

  Environmental Science

• Identifiers
  DOI 10.1016/J.ECSS.2005.10.003
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

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  2002influential reference
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  2001influential reference
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  2000influential reference
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  2000influential reference
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  1996influential reference
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  1990influential reference
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  1990cited by this paper
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  1989cited by this paper
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  1989influential reference
• Organic matter sources to the water column and surficial sediments of a marine bay

  1988cited by this paper
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  1985cited by this paper
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  1985influential reference
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  1985influential reference
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