Metal ions induced secondary structure rearrangements: mechanically interlocked lasso vs. unthreaded branched-cyclic topoisomers.

No abstract is available for this paper.

• Publication year

  2018

• Venue

  In Analysis

• Publication date

  2018-05-15

• Fields of study

  Medicine, Chemistry

• Identifiers
  DOI 10.1039/c8an00138cPMID 29721555
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Identification of Lasso Peptide Topologies Using Native Nanoelectrospray Ionization-Trapped Ion Mobility Spectrometry-Mass Spectrometry.

  2018cited by this paper
• Analysis of Photoirradiated Water Accommodated Fractions of Crude Oils Using Tandem TIMS and FT-ICR MS.

  2017cited by this paper
• Characterization of Intramolecular Interactions of Cytochrome c Using Hydrogen-Deuterium Exchange-Trapped Ion Mobility Spectrometry-Mass Spectrometry and Molecular Dynamics.

  2017cited by this paper
• Towards Discovery and Targeted Peptide Biomarker Detection Using nanoESI-TIMS-TOF MS

  2017cited by this paper
• Fast and Effective Ion Mobility-Mass Spectrometry Separation of d-Amino-Acid-Containing Peptides.

  2017cited by this paper
• Metalloprotein Crystallography: More than a Structure

  2016cited by this paper
• Cis→Trans Isomerization of Pro7 in Oxytocin Regulates Zn2+ Binding

  2016cited by this paper
• IRMPD Spectroscopy: Evidence of Hydrogen Bonding in the Gas Phase Conformations of Lasso Peptides and their Branched-Cyclic Topoisomers.

  2016cited by this paper
• Structure of the Lasso Peptide Isopeptidase Identifies a Topology for Processing Threaded Substrates.

  2016cited by this paper
• Oversampling Selective Accumulation Trapped Ion Mobility Spectrometry Coupled to FT-ICR MS: Fundamentals and Applications.

  2016cited by this paper
• Towards the analysis of high molecular weight proteins and protein complexes using TIMS-MS

  2016cited by this paper
• On the structural denaturation of biological analytes in trapped ion mobility spectrometry - mass spectrometry.

  2016cited by this paper
• The ring residue proline 8 is crucial for the thermal stability of the lasso peptide caulosegnin II.

  2016cited by this paper
• Separation and Identification of Isomeric Glycans by Selected Accumulation-Trapped Ion Mobility Spectrometry-Electron Activated Dissociation Tandem Mass Spectrometry.

  2016cited by this paper
• Isomer separation of polybrominated diphenyl ether metabolites using nanoESI-TIMS-MS

  2016cited by this paper
• A new genome-mining tool redefines the lasso peptide biosynthetic landscape

  2016cited by this paper
• Structures of the kinetically trapped i-motif DNA intermediates.

  2016cited by this paper
• Lifetimes and stabilities of familiar explosive molecular adduct complexes during ion mobility measurements.

  2015cited by this paper
• Targeted high-resolution ion mobility separation coupled to ultrahigh-resolution mass spectrometry of endocrine disruptors in complex mixtures.

  2015cited by this paper
• Gas-phase conformations of capistruin - comparison of lasso, branched-cyclic and linear topologies.

  2015cited by this paper
• Lasso peptides: an intriguing class of bacterial natural products.

  2015cited by this paper
• Kinetic Intermediates of Holo- and Apo-Myoglobin Studied Using HDX-TIMS-MS and Molecular Dynamic Simulations

  2015cited by this paper
• Parallel Accumulation-Serial Fragmentation (PASEF): Multiplying Sequencing Speed and Sensitivity by Synchronized Scans in a Trapped Ion Mobility Device.

  2015cited by this paper
• Ion mobility-mass spectrometry of lasso peptides: signature of a rotaxane topology.

  2015cited by this paper
• Structural resolution of 4-substituted proline diastereomers with ion mobility spectrometry via alkali metal ion cationization.

  2015cited by this paper
• Microheterogeneity within conformational states of ubiquitin revealed by high resolution trapped ion mobility spectrometry.

  2015cited by this paper
• Prospecting genomes for lasso peptides

  2014cited by this paper
• The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics.

  2014cited by this paper
• Rapid differentiation of ortho-, meta-, and para-isomers of halogenated phenylmethylidene hydrazinecarbodithioates by metal complexation and electrospray ionization mass spectrometry.

  2014cited by this paper
• Isomerization kinetics of AT hook decapeptide solution structures.

  2014cited by this paper
• Fast Screening of Polycyclic Aromatic Hydrocarbons using Trapped Ion Mobility Spectrometry - Mass Spectrometry.

  2014cited by this paper
• High resolution trapped ion mobility spectrometery of peptides.

  2014cited by this paper
• Rational improvement of the affinity and selectivity of integrin binding of grafted lasso peptides.

  2014cited by this paper
• Flavin Adenine Dinucleotide Structural Motifs: From Solution to Gas Phase

  2014cited by this paper
• Ion dynamics in a trapped ion mobility spectrometer.

  2014cited by this paper
• Direct Observation of Differences of Carotenoid Polyene Chain cis/trans Isomers Resulting from Structural Topology

  2014cited by this paper
• Discovery and characterization of an isopeptidase that linearizes lasso peptides.

  2013cited by this paper
• Studying metal ion-protein interactions: electronic absorption, circular dichroism, and electron paramagnetic resonance.

  2013cited by this paper
• The astexin-1 lasso peptides: biosynthesis, stability, and structural studies.

  2013cited by this paper
• Role of Cationization and Multimers Formation for Diastereomers Differentiation by Ion Mobility-Mass Spectrometry

  2013cited by this paper
• Lasso peptides from proteobacteria: Genome mining employing heterologous expression and mass spectrometry.

  2013cited by this paper
• Structural studies of metal ligand complexes by ion mobility-mass spectrometry

  2013cited by this paper
• Caulosegnins I-III: a highly diverse group of lasso peptides derived from a single biosynthetic gene cluster.

  2013cited by this paper
• Lasso peptides: structure, function, biosynthesis, and engineering.

  2012cited by this paper
• database of alkali metal-containing peptide cross sections : Influence of metals n size parameters for specific amino acids

  2012cited by this paper
• Precursor-centric genome-mining approach for lasso peptide discovery

  2012cited by this paper
• Metal ion-mediated DNA-protein interactions.

  2012cited by this paper
• Note: Integration of trapped ion mobility spectrometry with mass spectrometry.

  2011cited by this paper
• Biologically Relevant Metal-Cation Binding Induces Conformational Changes in Heparin Oligosaccharides as Measured by Ion Mobility Mass Spectrometry.

  2011cited by this paper
• Gas-phase separation using a trapped ion mobility spectrometer

  2011cited by this paper
• Electron Transfer Dissociation of Milk Oligosaccharides

  2011cited by this paper
• Metal binding to a zinc-finger peptide: a comparison between solution and the gas phase.

  2011cited by this paper
• A mass spectrometry-guided genome mining approach for natural product peptidogenomics

  2011cited by this paper
• Alkali metal cation-induced destabilization of gas-phase protein-ligand complexes: consequences and prevention.

  2011cited by this paper
• Introducing lasso peptides as molecular scaffolds for drug design: engineering of an integrin antagonist.

  2011cited by this paper
• Effects of transition metal ion coordination on the collision-induced dissociation of polyalanines.

  2011cited by this paper
• IR spectroscopy of cationized aliphatic amino acids: Stability of charge-solvated structure increases with metal cation size

  2010cited by this paper
• Calcium-induced structural transitions of the calmodulin-melittin system studied by electrospray mass spectrometry: conformational subpopulations and metal-unsaturated intermediates.

  2010cited by this paper
• Direct quantification of protein-metal ion affinities by electrospray ionization mass spectrometry.

  2010cited by this paper
• Insights into the biosynthesis and stability of the lasso peptide capistruin.

  2009cited by this paper
• Infrared multiphoton dissociation spectroscopy of cationized serine: effects of alkali-metal cation size on gas-phase conformation.

  2008cited by this paper
• Interactions of the hormone oxytocin with divalent metal ions.

  2008cited by this paper
• Investigating metal-binding in proteins by nuclear magnetic resonance

  2007cited by this paper
• Influence of cation adduction on the separation characteristics of flavonoid diglycoside isomers using dual gate-ion mobility-quadrupole ion trap mass spectrometry.

  2006cited by this paper
• Role of Na+ and K+ in enzyme function.

  2006cited by this paper
• Electron capture dissociation of tyrosine O-sulfated peptides complexed with divalent metal cations.

  2006cited by this paper
• Atypical behavior in the electron capture induced dissociation of biologically relevant transition metal ion complexes of the peptide hormone oxytocin

  2006cited by this paper
• Silver complexation and tandem mass spectrometry for differentiation of isomeric flavonoid diglycosides.

  2005cited by this paper
• Metal ion interactions with polyalanine peptides

  2004cited by this paper
• A crystallographic study of the binding of 13 metal ions to two related RNA duplexes.

  2003cited by this paper
• Structural characterization and isomer differentiation of chalcones by electrospray ionization tandem mass spectrometry.

  2003cited by this paper
• Microcin J25 has a threaded sidechain-to-backbone ring structure and not a head-to-tail cyclized backbone.

  2003cited by this paper
• Conformational studies of Zn-Ligand-Hexose diastereomers using ion mobility measurements and density functional theory calculations

  2002cited by this paper
• Large anhydrous polyalanine ions: substitution of Na+ for H+ destabilizes folded states

  2001cited by this paper
• Copper(II)-Assisted Enantiomeric Analysis of D,L-Amino Acids Using the Kinetic Method: Chiral Recognition and Quantification in the Gas Phase

  2000cited by this paper
• On the Stability of Amino Acid Zwitterions in the Gas Phase: The Influence of Derivatization, Proton Affinity, and Alkali Ion Addition

  2000cited by this paper
• Metal-Ion Enhanced Helicity in the Gas Phase

  2000cited by this paper
• Atmospheric pressure ion mobility spectrometry of protonated and sodiated peptides.

  1999cited by this paper
• Sequence Analysis of the Four Plasmid Genes Required To Produce the Circular Peptide Antibiotic Microcin J25

  1999cited by this paper
• Determination of calcium binding sites in gas-phase small peptides by tandem mass spectrometry

  1998cited by this paper
• Structural and Functional Aspects of Metal Sites in Biology.

  1996cited by this paper
• NAKED PROTEIN CONFORMATIONS : CYTOCHROME C IN THE GAS PHASE

  1995cited by this paper
• Gas-Phase Coordination Properties of Zn2+, Cu2+, Ni2+, and Co2+ with Histidine-Containing Peptides

  1995cited by this paper
• Interaction of angiotensin peptides and zinc metal ions probed by electrospray ionization mass spectrometry

  1994cited by this paper
• Nuclear magnetic resonance of paramagnetic metalloproteins

  1993cited by this paper
• Microcin 25, a novel antimicrobial peptide produced by Escherichia coli

  1992cited by this paper
• Fragmentations of gas-phase complexes between alkali metal ions and peptides: metal ion binding to carbonyl oxygens and other neutral functional groups

  1991cited by this paper
• Location of the alkali metal ion in gas-phase peptide complexes

  1991cited by this paper
• Electrospray ionization for mass spectrometry of large biomolecules.

  1989cited by this paper
• Interaction of dinucleotides with divalent metal ions: A circular dichroism study

  1978cited by this paper
• Biological action of metal ions

  1976cited by this paper
• The mobility and diffusion of ions in gases

  1973cited by this paper

• Lasso Peptide Syanodin I: Loop-Pulling Two-Step Thermal Unthreading Mechanism.

  2025cites this paper
• Complementary Separation of Novel Synthetic Opioids.

  2025cites this paper
• The pearl jubilee of microcin J25: thirty years of research on an exceptional lasso peptide.

  2024cites this paper
• How does food matrix components affect food allergies, food allergens and the detection of food allergens? A systematic review

  2022cites this paper
• Combined thermal and carboxypeptidase Y stability assays for probing the threaded fold of lasso peptides.

  2022cites this paper
• Exploring structural signatures of the lanthipeptide prochlorosin 2.8 using tandem mass spectrometry and trapped ion mobility-mass spectrometry

  2021cites this paper
• Exploring the conformational landscape of a lanthipeptide synthetase using native mass spectrometry

  2020cites this paper
• Factors Governing the Thermal Stability of Lasso Peptides

  2020cites this paper
• Potential allergenicity assessment after bovine apo-α-lactalbumin binding to calcium ion.

  2020cites this paper
• Structural signatures of the class III lasso peptide BI-32169 and the branched-cyclic topoisomers using trapped ion mobility spectrometry–mass spectrometry and tandem mass spectrometry

  2019cites this paper
• X Lasso Peptides: Structure, Biosynthesis, Activities, and Beyond

  2019cites this paper
• Trends in trapped ion mobility – Mass spectrometry instrumentation

  2019cites this paper
• Evidence of Cis/Trans-Isomerization at Pro7/Pro16 in the Lasso Peptide Microcin J25

  2019cites this paper