A Randomized Algorithm for Comparing Sets of Phylogenetic Trees

No abstract is available for this paper.

• Publication year

  2007

• Venue

  Asia-Pacific Bioinformatics Conference

• Publication date

  Unknown publication date

• Fields of study

  Biology, Mathematics, Computer Science

• Identifiers
  DOI 10.1142/9781860947995_0015
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Mesquite: a modular system for evolutionary analysis. Version 2.6

  2009cited by this paper
• A Sublinear-Time Randomized Approximation Scheme for the Robinson-Foulds Metric

  2006cited by this paper
• Analysis and visualization of tree space.

  2005cited by this paper
• Rec-I-DCM3: a fast algorithmic technique for reconstructing phylogenetic trees

  2004cited by this paper
• PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]

  2004cited by this paper
• A Linear-Time Majority Tree Algorithm

  2003cited by this paper
• Statistically based postprocessing of phylogenetic analysis by clustering

  2002cited by this paper
• The European database on small subunit ribosomal RNA

  2002cited by this paper
• A classification of consensus methods for phylogenetics

  2001cited by this paper
• Analyzing large data sets: rbcL 500 revisited.

  1997cited by this paper
• Introduction to algorithms

  1996cited by this paper
• PAUP:Phylogenetic analysis using parsi-mony

  1993influential reference
• Optimal algorithms for comparing trees with labeled leaves

  1985cited by this paper
• Comparison of phylogenetic trees

  1981cited by this paper
• Universal Classes of Hash Functions

  1979cited by this paper

• Rate variation and recurrent sequence errors in pandemic-scale phylogenetics

  2024cites this paper
• Integration of complete chloroplast genome sequences with small amplicon datasets improves phylogenetic resolution in Acacia.

  2016cites this paper
• Lattice-based data structures for deterministic parallel and distributed programming

  2015cites this paper
• Taming the parallel effect zoo: extensible deterministic parallelism with LVish

  2014cites this paper
• CLAP: A web-server for automatic classification of proteins with special reference to multi-domain proteins

  2014cites this paper
• PhyBin: binning trees by topology

  2013cites this paper
• Efficient algorithms for comparing, storing, and sharing large collections of evolutionary trees

  2012influential citation
• Big Cat Phylogenies, Consensus Trees, and Computational Thinking

  2011cites this paper
• Phylogenetic Search Algorithms for Maximum Likelihood

  2010cites this paper
• MrsRF: an efficient MapReduce algorithm for analyzing large collections of evolutionary trees

  2010cites this paper
• Efficient algorithms for phylogenetic post-analysis

  2010cites this paper
• Ancestral Recombination Histories for Error Detection in Genome Sequencing Gaussian Processes and Gene Regulation

  2010cites this paper
• Virtual Screening, Docking and Tree Comparison Methods Progress Report

  2009cites this paper
• Using tree diversity to compare phylogenetic heuristics

  2009cites this paper
• How Many Bootstrap Replicates Are Necessary?

  2009cites this paper
• Fast hash -based algorithms for analyzing large collections of evolutionary trees

  2009cites this paper
• Gaussian Processes and Gene Regulation

  2009cites this paper
• Fast Hashing Algorithms to Summarize Large Collections of Evolutionary Trees

  2008cites this paper
• An Experimental Analysis of Robinson-Foulds Distance Matrix Algorithms

  2008cites this paper
• New Approaches to Compare Phylogenetic Search Heuristics

  2008cites this paper
• Efficiently Computing Arbitrarily-Sized Robinson-Foulds Distance Matrices

  2008cites this paper
• Cluster and Visualization Applications for Phylogenetic Tree Analysis

  2007cites this paper
• Phylogenetic networks: simulation, characterization, and reconstruction

  2007cites this paper
• Thesis Proposal: Lattice-based Data Structures for Deterministic Parallel and Distributed Programming

  year unknowncites this paper