Comparative transcriptome analyses of drought-resistant and - susceptible Brassica napus L. and development of EST-SSR markers by RNA-Seq

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Journal of Plant Biology

• Publication date

  2015-07-21

• Fields of study

  Biology, Environmental Science

• Identifiers
  DOI 10.1007/s12374-015-0113-x
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• RNA-seq analyses of multiple meristems of soybean: novel and alternative transcripts, evolutionary and functional implications

  2014cited by this paper
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  2013cited by this paper
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  2012influential reference
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  2012influential reference
• De novo assembly and characterization of the garlic (Allium sativum) bud transcriptome by Illumina sequencing

  2012cited by this paper
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  2011cited by this paper
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  2011cited by this paper
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  2011cited by this paper
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  2011cited by this paper
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  2011influential reference
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  2011influential reference
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  2010influential reference
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  2010influential reference
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  2010cited by this paper
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  2010cited by this paper
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  2010cited by this paper
• A scaling normalization method for differential expression analysis of RNA-seq data

  2010cited by this paper
• Applications of new sequencing technologies for transcriptome analysis.

  2009cited by this paper
• Mapping and quantifying mammalian transcriptomes by RNA-Seq

  2008cited by this paper
• Next-generation sequencing transforms today's biology

  2008cited by this paper
• KEGG for linking genomes to life and the environment

  2007influential reference
• Responses of osmotic adjustment and seed yield of Brassica napus and B. juncea to soil water deficit at different growth stages

  2006cited by this paper
• WEGO: a web tool for plotting GO annotations

  2006cited by this paper
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  2005cited by this paper
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  2004cited by this paper
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  2004cited by this paper
• The COG database: a tool for genome-scale analysis of protein functions and evolution

  2000influential reference
• KEGG: Kyoto Encyclopedia of Genes and Genomes

  2000cited by this paper
• ESTScan: A Program for Detecting, Evaluating, and Reconstructing Potential Coding Regions in EST Sequences

  1999cited by this paper
• The significance of digital gene expression profiles.

  1997cited by this paper
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• Physiology: Crop Development, Growth and Yield

  1995cited by this paper
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  1995cited by this paper
• Effect of irrigation and nitrogen on yield and quality of oilseed rape

  1984cited by this paper
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  1978cited by this paper
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  1978cited by this paper
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  year unknowncited by this paper

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  2020cites this paper
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