Identification of volatile and softening-related genes using digital gene expression profiles in melting peach

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Tree Genetics & Genomes

• Publication date

  2015-06-26

• Fields of study

  Biology, Environmental Science

• Identifiers
  DOI 10.1007/s11295-015-0891-9
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Expression profiling of genes involved in the formation of aroma in two peach genotypes.

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• Peach genetic resources: diversity, population structure and linkage disequilibrium

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  2013influential reference
• Genetic dissection of aroma volatile compounds from the essential oil of peach fruit: QTL analysis and identification of candidate genes using dense SNP maps

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• Postharvest temperature influences volatile lactone production via regulation of acyl-CoA oxidases in peach fruit.

  2012influential reference
• Ripening Development and Quality of Melting and Non-melting Flesh Peach Cultivars

  2012cited by this paper
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  2012cited by this paper
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• New approaches to Prunus transcriptome analysis

  2011cited by this paper
• Differential transcript abundance and genotypic variation of four putative allergen-encoding gene families in melting peach

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• DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

  2010influential reference
• Expression of genes associated with aroma formation derived from the fatty acid pathway during peach fruit ripening.

  2010influential reference
• Identification of key odor volatile compounds in the essential oil of nine peach accessions.

  2010cited by this paper
• A scaling normalization method for differential expression analysis of RNA-seq data

  2010cited by this paper
• Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

  2009cited by this paper
• Comparative EST transcript profiling of peach fruits under different post-harvest conditions reveals candidate genes associated with peach fruit quality

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• Open Access Method

  2009influential reference
• Volatile characteristics of 50 peaches and nectarines evaluated by HP-SPME with GC-MS

  2009cited by this paper
• edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

  2009influential reference
• Comparative analysis of expressed sequence tags from tissues in ripening stages of peach (Prunus persica L. Batsch)

  2009cited by this paper
• BMC Molecular Biology BioMed Central

  2008cited by this paper
• Mapping and quantifying mammalian transcriptomes by RNA-Seq

  2008cited by this paper
• Biosynthesis of plant-derived flavor compounds.

  2008cited by this paper
• β-Galactosidase and α-L-Arabinofuranosidase in Cell Wall Modification Related with Fruit Development and Softening

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• Cellular expansion and gene expression in the developing grape (Vitis vinifera L.)

  2008influential reference
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  2007cited by this paper
• Isolation and characterization of a tomato non-specific lipid transfer protein involved in polygalacturonase-mediated pectin degradation.

  2007cited by this paper
• Plant ATP-binding cassette transporters.

  2007cited by this paper
• Ethylene-regulation of fruit softening and softening-related genes in peach.

  2006influential reference
• Automated genome annotation and pathway identification using the KEGG Orthology (KO) as a controlled vocabulary

  2005cited by this paper
• Deletions in an endopolygalacturonase gene cluster correlate with non-melting flesh texture in peach.

  2004cited by this paper
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  2002cited by this paper
• Molecular cloning of beta-galactosidase from Japanese pear (Pyrus pyrifolia) and its gene expression with fruit ripening.

  2001cited by this paper
• Purification and characterization of a novel pumpkin short-chain acyl-coenzyme A oxidase with structural similarity to acyl-coenzyme A dehydrogenases.

  2000cited by this paper
• Long-chain acyl-CoA oxidases of Arabidopsis.

  1999cited by this paper
• High-affinity binding of very-long-chain fatty acyl-CoA esters to the peroxisomal non-specific lipid-transfer protein (sterol carrier protein-2).

  1999cited by this paper
• FRET microscopy demonstrates molecular association of non‐specific lipid transfer protein (nsL‐TP) with fatty acid oxidation enzymes in peroxisomes

  1998cited by this paper
• Controlling the false discovery rate: a practical and powerful approach to multiple testing

  1995cited by this paper
• Apple [beta]-Galactosidase (Activity against Cell Wall Polysaccharides and Characterization of a Related cDNA Clone)

  1994cited by this paper
• Tissue-Specific Expression of a Gene Encoding a Cell Wall-Localized Lipid Transfer Protein from Arabidopsis

  1994cited by this paper
• Predominant localization of non‐specific lipid‐transfer protein of the yeast Candida tropicalis in the matrix of peroxisomes

  1994cited by this paper

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