Public web-based services from the European Bioinformatics Institute

No abstract is available for this paper.

• Publication year

  2004

• Venue

  Nucleic Acids Res.

• Publication date

  2004-07-01

• Fields of study

  Biology, Medicine, Computer Science

• Identifiers
  DOI 10.1093/nar/gkh405PMID 15215339PMCID PMC441543
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  2000cited by this paper
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  2000cited by this paper
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  1997influential reference
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  1996cited by this paper
• Dali: a network tool for protein structure comparison.

  1995cited by this paper
• CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

  1994cited by this paper
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  1993cited by this paper
• CpG islands as gene markers in the human genome.

  1992cited by this paper
• Computer speed and sequence comparison.

  1992cited by this paper
• Database of homology‐derived protein structures and the structural meaning of sequence alignment

  1991cited by this paper

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• Accurate prediction of protein folding rates from sequence and sequence‐derived residue flexibility and solvent accessibility

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• Proposed minimal standards for the description of genera, species and subspecies of the Pasteurellaceae.

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