Carbon flow from volcanic CO2 into soil microbial communities of a wetland mofette

No abstract is available for this paper.

• Publication year

  2014

• Venue

  The ISME Journal

• Publication date

  2014-09-12

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1038/ismej.2014.148PMID 25216086PMCID PMC4331572
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi

  2013cited by this paper
• Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling

  2013cited by this paper
• Methanogenic pathways, 13C isotope fractionation, and archaeal community composition in lake sediments and wetland soils on the Tibetan Plateau

  2013influential reference
• Blastocatella fastidiosa gen. nov., sp. nov., isolated from semiarid savanna soil - the first described species of Acidobacteria subdivision 4.

  2013cited by this paper
• Microbial community changes at a terrestrial volcanic CO2 vent induced by soil acidification and anaerobic microhabitats within the soil column.

  2013cited by this paper
• Functional ecology of an Antarctic Dry Valley

  2013cited by this paper
• CO2 discharge in an active, non-volcanic continental rift area (Czech Republic): Characterisation (δ13C, 3He/4He) and quantification of diffuse and vent CO2 emissions

  2013influential reference
• Significant Role for Microbial Autotrophy in the Sequestration of Soil Carbon

  2012influential reference
• Predominance of thaumarchaeal ammonia oxidizer abundance and transcriptional activity in an acidic fen.

  2012cited by this paper
• Carbon Isotope Fractionation of 11 Acetogenic Strains Grown on H2 and CO2

  2012influential reference
• Origin and fate of acetate in an acidic fen.

  2012influential reference
• Competing Formate- and Carbon Dioxide-Utilizing Prokaryotes in an Anoxic Methane-Emitting Fen Soil

  2011cited by this paper
• Early Evolution of Membrane Lipids: How did the Lipid Divide Occur?

  2011cited by this paper
• Methanoregula boonei gen. nov., sp. nov., an acidiphilic methanogen isolated from an acidic peat bog.

  2011cited by this paper
• Beyond the Calvin cycle: autotrophic carbon fixation in the ocean.

  2011cited by this paper
• Influence of geogenic CO2 on mineral and organic soil constituents on a mofette site in the NW Czech Republic

  2011cited by this paper
• Distribution of intact and core GDGTs in marine sediments

  2011cited by this paper
• New monitoring approach for metabolic dynamics in microbial ecosystems using stable-isotope-labeling technologies.

  2010cited by this paper
• Microbial 13C utilization patterns via stable isotope probing of phospholipid biomarkers in Mojave Desert soils exposed to ambient and elevated atmospheric CO2

  2010cited by this paper
• Experimental studies on the stable carbon isotope biogeochemistry of acetate in lake sediments.

  2010influential reference
• Intramolecular stable carbon isotopic analysis of archaeal glycosyl tetraether lipids.

  2010cited by this paper
• The biogeochemistry of sorbed methane in marine sediments

  2010cited by this paper
• Metagenomic analysis reveals a marked divergence in the structure of belowground microbial communities at elevated CO2.

  2010cited by this paper
• Presence of Novel, Potentially Homoacetogenic Bacteria in the Rumen as Determined by Analysis of Formyltetrahydrofolate Synthetase Sequences from Ruminants

  2010cited by this paper
• Soil microbial community changes as a result of long-term exposure to a natural CO2 vent

  2010influential reference
• The stable carbon isotope biogeochemistry of acetate and other dissolved carbon species in deep subseafloor sediments at the northern Cascadia Margin

  2009cited by this paper
• Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

  2009influential reference
• Evaluation of the bacterial diversity in cecal contents of laying hens fed various molting diets by using bacterial tag-encoded FLX amplicon pyrosequencing.

  2009cited by this paper
• Reductosols: Natural soils and Technosols under reducing conditions without an aquic moisture regime

  2009cited by this paper
• Intermediary ecosystem metabolism as a main driver of methanogenesis in acidic wetland soil.

  2009cited by this paper
• Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

  2009influential reference
• Competition of Fe(III) reduction and methanogenesis in an acidic fen.

  2008cited by this paper
• Uncultured archaea in deep marine subsurface sediments: have we caught them all?

  2008cited by this paper
• Quantification of bacterial RubisCO genes in soils by cbbL targeted real-time PCR.

  2007cited by this paper
• The life of plants under extreme CO2

  2007cited by this paper
• DNA stable-isotope probing

  2007cited by this paper
• SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

  2007influential reference
• Changes in enzyme activities and soil microbial community composition along carbon and nutrient gradients at the Franz Josef chronosequence, New Zealand

  2007cited by this paper
• Combined Gas-geochemical and Receiver Function Studies of the Vogtland/NW Bohemia Intraplate Mantle Degassing Field, Central Europe

  2007cited by this paper
• Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA.

  2006cited by this paper
• Isolation of a novel acidiphilic methanogen from an acidic peat bog

  2006cited by this paper
• Effect of pH on Isolation and Distribution of Members of Subdivision 1 of the Phylum Acidobacteria Occurring in Soil

  2006influential reference
• Evidence for the Ubiquity of Mixotrophic Bacteria in the Upper Ocean: Implications and Consequences

  2006cited by this paper
• Online δ13C analysis of volatile fatty acids in sediment/porewater systems by liquid chromatography‐isotope ratio mass spectrometry

  2006cited by this paper
• Heterotrophic Fixation of CO2 in Soil

  2005influential reference
• Quantification of methanogenic pathways using stable carbon isotopic signatures: a review and a proposal

  2005influential reference
• Heterotrophic fixation of CO(2) in soil.

  2005cited by this paper
• Non-phototrophic CO2 fixation by soil microorganisms

  2005influential reference
• Diversity of Green-Like and Red-Like Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase Large-Subunit Genes (cbbL) in Differently Managed Agricultural Soils

  2005cited by this paper
• Community-level analysis: key genes of CO2-reductive acetogenesis.

  2005cited by this paper
• Assimilation of CO2 by soil microorganisms and transformation into soil organic matter

  2004cited by this paper
• Evidence for a nitrogen flux directly derived from the European subcontinental mantle in the Western Eger Rift, Central Europe

  2004influential reference
• ARB: a software environment for sequence data.

  2004cited by this paper
• Plants and Geothermal CO2 Exhalations — Survival in and Adaptation to a High CO2 Environment

  2004cited by this paper
• Microbial Communities Associated with Geological Horizons in Coastal Subseafloor Sediments from the Sea of Okhotsk

  2003cited by this paper
• Hydrogenotrophic Methanogenesis by Moderately Acid-Tolerant Methanogens of a Methane-Emitting Acidic Peat

  2003influential reference
• Structural characteristics of epicentral areas in Central Europe: study case Cheb Basin (Czech Republic)

  2003cited by this paper
• Characterization of Specific Membrane Fatty Acids as Chemotaxonomic Markers for Sulfate-Reducing Bacteria Involved in Anaerobic Oxidation of Methane

  2003cited by this paper
• Environmental isotopes in hydrogeology

  2003cited by this paper
• Oligonucleotide Microarray for 16S rRNA Gene-Based Detection of All Recognized Lineages of Sulfate-Reducing Prokaryotes in the Environment

  2002cited by this paper
• Anaerobic activities of bacteria and fungi in moderately acidic conifer and deciduous leaf litter.

  2002cited by this paper
• Diversity, Abundance, and Activity of Archaeal Populations in Oil-Contaminated Groundwater Accumulated at the Bottom of an Underground Crude Oil Storage Cavity

  2002influential reference
• Carbon and nitrogen pools and mineralization in a grassland gley soil under elevated carbon dioxide at a natural CO2 spring

  2000cited by this paper
• Rapid Detection and Quantification of Members of the Archaeal Community by Quantitative PCR Using Fluorogenic Probes

  2000cited by this paper
• Clostridium scatologenes strain SL1 isolated as an acetogenic bacterium from acidic sediments.

  2000cited by this paper
• The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

  1999cited by this paper
• Gas flux distribution in mineral springs and tectonic structure in the western Eger Rift

  1998cited by this paper
• Cellulose degradation in anaerobic environments.

  1995cited by this paper
• Partial gene sequences for the A subunit of methyl-coenzyme M reductase (mcrI) as a phylogenetic tool for the family Methanosarcinaceae.

  1995cited by this paper
• Acetate Synthesis in Soil from a Bavarian Beech Forest

  1994cited by this paper
• Carbon isotope effects associated with aceticlastic methanogenesis

  1994influential reference
• Archaea in coastal marine environments.

  1992cited by this paper
• Primary structure of the thermostable formyltetrahydrofolate synthetase from Clostridium thermoaceticum.

  1990cited by this paper
• Carbon isotope effects associated with autotrophic acetogenesis.

  1989influential reference
• Molecular Cell Biology

  1986cited by this paper
• Organic nutrition of chemolithotrophic bacteria.

  1978cited by this paper
• Transport Across Cell Membranes

  1958cited by this paper
• Gas Flux and Tectonic Structure in the Western Eger Rift , Karlovy Vary – Oberpfalz and Oberfranken , Bavaria

  year unknowncited by this paper

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• A Minority of Desert Cyanobacteria and Algae Is Responsible for the Bulk of CO2 Fixation

  2025cites this paper
• Strong depth-dependent chemical and structural characteristics of Dissolved Organic Matter (DOM) in organic-rich sediment in a shallow temperate lake

  2025cites this paper
• Comparative analysis of crab growth performance, enzyme activity, and microbiota between rice-crab coculture and pond farming systems

  2025cites this paper
• Coupling use of stable isotopes and functional genes as indicators for the impacts of artificial restoration on the carbon storage of a coastal wetland invaded by Spartina alterniflora, southeastern China

  2024cites this paper
• Microbial diversity and biogeochemical interactions in the seismically active and CO2- rich Eger Rift ecosystem

  2024cites this paper
• Advancements in Geochemistry and Origins of CO2 in Natural Gas Reservoirs of China

  2024cites this paper
• The effect of the 13C abundance of soil microbial DNA on identifying labelled fractions after ultracentrifugation

  2024cites this paper
• Changes in bacterial communities during rice cultivation remove phenolic constraints on peatland carbon preservation

  2024cites this paper
• Enrichment of rare methanogenic Archaea shows their important ecological role in natural high-CO2 terrestrial subsurface environments

  2023cites this paper
• Seasonal Environmental Controls on Soil CO2 Dynamics at a High CO2 Flux Sites (Piton de la Fournaise and Mayotte Volcanoes)

  2023cites this paper
• Metagenome-Assembled Genome of a Putative Methanogenic Methanosarcina sp. Strain Enriched from Terrestrial High-CO2 Subsurface Sediments

  2022cites this paper
• Microbial diversity and community dynamics in an active, high CO2 subsurface rift ecosystem

  2022influential citation
• Circular Metagenome-Assembled Genome of Methanobacterium sp. Strain ERen5, a Putative Methanogenic, H2-Utilizing Terrestrial Subsurface Archaeon

  2022cites this paper
• Effects of natural non-volcanic CO2 leakage on soil microbial community composition and diversity.

  2022cites this paper
• Genetic diversity in terrestrial subsurface ecosystems impacted by geological degassing

  2022cites this paper
• Depth wide distribution and metabolic potential of chemolithoautotrophic microorganisms reactivated from deep continental granitic crust underneath the Deccan Traps at Koyna, India

  2022cites this paper
• Reviews and syntheses: Heterotrophic fixation of inorganic carbon – significant but invisible flux in environmental carbon cycling

  2021influential citation
• Effects of Remediation Agents on Microbial Community Structure and Function in Soil Aggregates Contaminated with Heavy Metals

  2021cites this paper
• Dark CO2 fixation in temperate beech and pine forest soils

  2021cites this paper
• Applications of DNA/RNA-stable isotope probing (SIP) in environmental microbiology

  2021cites this paper
• Geological degassing enhances microbial metabolism in the continental subsurface

  2020cites this paper
• Phospholipids as Life Markers in Geological Habitats

  2020cites this paper
• Optimizing ultracentrifugation conditions for DNA-based stable isotope probing (DNA-SIP).

  2020cites this paper
• Characterizing changes in soil microbiome abundance and diversity due to different cover crop techniques

  2020cites this paper
• Influence of CO2 on Water Chemistry and Bacterial Community Structure and Diversity: An Experimental Study in the Laboratory

  2020cites this paper
• Characteristics of soil CO2 under different conditions and its influence on water chemical composition: an experimental and modeling study in the laboratory

  2020cites this paper
• Deciphering the rhizosphere microbiome of a bamboo plant in response to different chromium contamination levels.

  2020cites this paper
• Rates of dark CO2 fixation are driven by microbial biomass in a temperate forest soil

  2020cites this paper
• Microbial Signatures in Deep CO2-Saturated Miocene Sediments of the Active Hartoušov Mofette System (NW Czech Republic)

  2020cites this paper
• Responses of soil nutrients and microbial communities to intercropping medicinal plants in moso bamboo plantations in subtropical China

  2019cites this paper
• AcetoBase: a functional gene repository and database for formyltetrahydrofolate synthetase sequences

  2019cites this paper
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  2019cites this paper
• Effects of elevated carbon dioxide on environmental microbes and its mechanisms: A review.

  2019cites this paper
• Spatial distribution of metal(loid) depletion and accumulation zones around a natural carbon dioxide degassing site

  2019cites this paper
• Phylogenetic Techniques in Geomicrobiology

  2019cites this paper
• Diversity and Ecology of Fungi in Mofettes

  2019cites this paper
• Microbiomes in Soils Exposed to Naturally High Concentrations of CO2 (Bossoleto Mofette Tuscany, Italy)

  2019influential citation
• Carbon isotopic signature of interstitial soil gases reveals the potential role of ecosystems in mitigating geogenic greenhouse gas emissions: Case studies from hydrothermal systems in Italy.

  2019cites this paper
• Dark microbial CO2 fixation in temperate forest soils increases with CO2 concentration

  2019cites this paper
• Microbial Community Level Physiological Profiles of Active Mud Volcano Soils in Andaman and Nicobar Islands

  2018cites this paper
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  2018cites this paper
• Occultifur mephitis f.a., sp. nov. and other yeast species from hypoxic and elevated CO2 mofette environments.

  2018cites this paper
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  2018cites this paper
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  2018cites this paper
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  2018cites this paper
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  2018influential citation
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  2018cites this paper
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  2017cites this paper
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  2017cites this paper
• Arbuscular Mycorrhizal Fungi in Hypoxic Environments

  2017cites this paper
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  2017influential citation
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  2017cites this paper
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  2016cites this paper
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  2016cites this paper
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  2016cites this paper
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  2016cites this paper
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  2016cites this paper
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  2016cites this paper
• Mofettes in Slovenske gorice, Slovenia

  2016cites this paper
• Tracking activity and function of microorganisms by stable isotope probing of membrane lipids.

  2016cites this paper
• Time and temperature dependency of carbon dioxide triggered metal(loid) mobilization in soil

  2016influential citation
• Long-term CO2 injection and its impact on near-surface soil microbiology.

  2016influential citation
• Altered carbon turnover processes and microbiomes in soils under long-term extremely high CO2 exposure

  2016cites this paper
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  2015cites this paper