Molecular analysis of gene expression in the developing pontocerebellar projection system.

No abstract is available for this paper.

• Publication year

  2002

• Venue

  Neuron

• Publication date

  2002-10-24

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/S0896-6273(02)01016-4PMID 12408845
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Normalization of cDNA microarray data.

  2003cited by this paper
• Comparison of Methods for Image Analysis on cDNA Microarray Data

  2002cited by this paper
• Design issues for cDNA microarray experiments

  2002cited by this paper
• Identification of genes expressed with temporal-spatial restriction to developing cerebellar neuron precursors by a functional genomic approach

  2002cited by this paper
• Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation.

  2002cited by this paper
• Vitronectin regulates Sonic hedgehog activity during cerebellum development through CREB phosphorylation.

  2001cited by this paper
• Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays

  2001cited by this paper
• Activated Notch2 signaling inhibits differentiation of cerebellar granule neuron precursors by maintaining proliferation.

  2001cited by this paper
• Normalization for cDNA microarry data

  2001cited by this paper
• Activation of cell-cycle-associated proteins in neuronal death: a mandatory or dispensable path?

  2001cited by this paper
• Neuroligin expressed in nonneuronal cells triggers presynaptic development in contacting axons.

  2000cited by this paper
• Postsynaptic CPG15 promotes synaptic maturation and presynaptic axon arbor elaboration in vivo

  2000cited by this paper
• ETS gene Er81 controls the formation of functional connections between group Ia sensory afferents and motor neurons.

  2000cited by this paper
• Sonic hedgehog Promotes G1 Cyclin Expression and Sustained Cell Cycle Progression in Mammalian Neuronal Precursors

  2000cited by this paper
• Axonal remodeling and synaptic differentiation in the cerebellum is regulated by WNT-7a signaling.

  2000cited by this paper
• Gene expression profiling of mouse postnatal cerebellar development.

  2000cited by this paper
• Insights from mouse models into the molecular basis of neurodegeneration.

  2000cited by this paper
• Gene expression in mouse cerebellum during its development.

  2000cited by this paper
• Expression and Branch-Specific Export of mRNA Are Regulated by Synapse Formation and Interaction with Specific Postsynaptic Targets

  1999cited by this paper
• Transcription factors Mash-1 and Prox-1 delineate early steps in differentiation of neural stem cells in the developing central nervous system.

  1999cited by this paper
• Collapsin-1/Semaphorin-III/D Is Regulated Developmentally in Purkinje Cells and Collapses Pontocerebellar Mossy Fiber Neuronal Growth Cones

  1999cited by this paper
• Cerebellar histogenesis is disturbed in mice lacking cyclin D2.

  1999cited by this paper
• DNA arrays for analysis of gene expression.

  1999cited by this paper
• A cell cycle alteration precedes apoptosis of granule cell precursors in the weaver mouse cerebellum.

  1999cited by this paper
• Rescue of Cerebellar Granule Cells from Death in weaver NR1 Double Mutants

  1999cited by this paper
• Control of neuronal precursor proliferation in the cerebellum by Sonic Hedgehog.

  1999cited by this paper
• Differential Regulation of Synaptic Vesicle Protein Genes by Target and Synaptic Activity

  1998cited by this paper
• Cluster analysis and display of genome-wide expression patterns.

  1998cited by this paper
• Functionally related motor neuron pool and muscle sensory afferent subtypes defined by coordinate ETS gene expression.

  1998cited by this paper
• Promotion of dendritic growth by CPG15, an activity-induced signaling molecule.

  1998cited by this paper
• Neuronal Pentraxin Receptor, a Novel Putative Integral Membrane Pentraxin That Interacts with Neuronal Pentraxin 1 and 2 and Taipoxin-associated Calcium-binding Protein 49*

  1997cited by this paper
• Genes involved in cerebellar cell specification and differentiation.

  1997cited by this paper
• Noncoordinate expression of odorant receptor genes tightly linked in the zebrafish genome.

  1997cited by this paper
• Neurodegeneration in Lurcher mice caused by mutation in δ2 glutamate receptor gene

  1997cited by this paper
• Math1 is essential for genesis of cerebellar granule neurons

  1997cited by this paper
• Neuritin: a gene induced by neural activity and neurotrophins that promotes neuritogenesis.

  1997cited by this paper
• Cell lineage determination and the control of neuronal identity in the neural crest.

  1997cited by this paper
• A family of LIM domain-associated cofactors confer transcriptional synergism between LIM and Otx homeodomain proteins.

  1997cited by this paper
• Gentleman R: R: A language for data analysis and graphics

  1996cited by this paper
• Functional effects of the mouse weaver mutation on G protein-gated inwardly rectifying K+ channels.

  1996cited by this paper
• Functional analysis of the weaver mutant GIRK2 K+ channel and rescue of weaver granule cells.

  1996cited by this paper
• Identification of the weaver mouse mutation: the end of the beginning.

  1996cited by this paper
• MN20, a D2 cyclin, is transiently expressed in selected neural populations during embryogenesis

  1996cited by this paper
• A potassium channel mutation in weaver mice implicates membrane excitability in granule cell differentiation

  1995cited by this paper
• A motoneuron-selective stop signal in the synaptic protein S-laminin.

  1995cited by this paper
• SCG10 expresses growth-associated manner in developing rat brain, but shows a different pattern to p19/stathmin or GAP-43.

  1995influential reference
• Agrin is a differentiation-inducing "stop signal" for motoneurons in vitro.

  1995cited by this paper
• Maintenance of Wnt-3 expression in Purkinje cells of the mouse cerebellum depends on interactions with granule cells.

  1994cited by this paper
• Cell-cell interactions influence survival and differentiation of purified Purkinje cells in vitro.

  1994cited by this paper
• Ontogeny of the cell adhesion molecule L1 in the cerebellum of weaver and reeler mutant mice

  1994cited by this paper
• A single protocol to detect transcripts of various types and expression levels in neural tissue and cultured cells: in situ hybridization using digoxigenin-labelled cRNA probes

  1993cited by this paper
• Selective expression of the glutamate receptor channel delta 2 subunit in cerebellar Purkinje cells.

  1993cited by this paper
• Selective Expression of the Glutamate Receptor Channel δ2 Subunit in Cerebellar Purkinje Cells

  1993cited by this paper
• Mammalian achaete-scute homolog 1 is required for the early development of olfactory and autonomic neurons.

  1993cited by this paper
• Cerebellar target neurons provide a stop signal for afferent neurite extension in vitro

  1992cited by this paper
• Purification, cloning, and RXR identity of the HeLa cell factor with which RAR or TR heterodimerizes to bind target sequences efficiently.

  1992cited by this paper
• Early development of the Lurcher cerebellum: Purkinje cell alterations and impairment of synaptogenesis

  1992cited by this paper
• Nerve growth cone motility.

  1990cited by this paper
• Novel GABAA receptor alpha subunit is expressed only in cerebellar granule cells.

  1990cited by this paper
• Novel GABAA receptor α subunit is expressed only in cerebellar granule cells

  1990cited by this paper
• Cerebellar synaptogenesis: what we can learn from mutant mice.

  1990cited by this paper
• Two rat homologues of Drosophila achaete-scute specifically expressed in neuronal precursors

  1990cited by this paper
• Weaver mouse cerebellar granule neurons fail to migrate on wild-type astroglial processes in vitro

  1986cited by this paper
• Neuronal regulation of astroglial morphology and proliferation in vitro

  1985cited by this paper
• A simple and very efficient method for generating cDNA libraries.

  1983cited by this paper
• Structural and quantitative studies on the normal C3H and Lurcher mutant mouse.

  1979cited by this paper
• Cerebellar histogenesis in the lurcher (Lc) mutant mouse

  1977cited by this paper
• Organization of cerebellar cortex secondary to deficit of granule cells in weaver mutant mice

  1973cited by this paper
• Sequence of developmental abnormalities leading to granule cell deficit in cerebellar cortex of weaver mutant mice

  1973cited by this paper

• Functional characterization of endocytic signals in the SynDIG/PRRT family members SynDIG1 and SynDIG4 in heterologous cells and neurons

  2025cites this paper
• Expression pattern of Calbindin-D28k, NeuN, ATOH1 and EN2 genes in the human fetal cerebellum

  2024cites this paper
• MIT Open Access

  2022cites this paper
• Expression of ATOH1 gene and activated signaling pathways for the neurogenesis of cerebellar granule cells: A review

  2022cites this paper
• Synapse differentiation-induced gene 1 regulates stress-induced depression through interaction with the AMPA receptor GluA2 subunit of nucleus accumbens in male mice.

  2022cites this paper
• Structure, Function, and Pharmacology of Glutamate Receptor Ion Channels

  2021cites this paper
• Analysis of Gene Networks in Cerebellar Development

  2021cites this paper
• Beyond the AMPA receptor: Diverse roles of SynDIG/PRRT brain-specific transmembrane proteins at excitatory synapses

  2021cites this paper
• Microarray profiling emphasizes transcriptomic differences between hippocampal in vivo tissue and in vitro cultures

  2021cites this paper
• mTOR regulates cocaine-induced behavioural sensitization through the SynDIG1–GluA2 interaction in the nucleus accumbens

  2021cites this paper
• AMPA receptor auxiliary subunits emerged during early vertebrate evolution by neo/subfunctionalization of unrelated proteins

  2020cites this paper
• Signaling pathways in cerebellar granule cells development.

  2019cites this paper
• 12 Transcription Factor Targets as Treatment for Medulloblastoma

  2018cites this paper
• Apolipoprotein D Apolipoprotein D

  2017cites this paper
• The Long Journey of Pontine Nuclei Neurons: From Rhombic Lip to Cortico-Ponto-Cerebellar Circuitry

  2017cites this paper
• Loss of SynDIG1 Reduces Excitatory Synapse Maturation But Not Formation In Vivo

  2016cites this paper
• Distribution of the SynDIG4/proline‐rich transmembrane protein 1 in rat brain

  2016cites this paper
• Activation of SIRT 3 by the NAD + precursor nicotinamide riboside protects from noise-induced hearing loss

  2016cites this paper
• The serine protease inhibitor SerpinA3N attenuates neuropathic pain by inhibiting T cell-derived leukocyte elastase

  2015cites this paper
• Loss of MXD3 induces apoptosis of Reh human precursor B acute lymphoblastic leukemia cells.

  2015cites this paper
• Linear Models for Microarray and RNA-Seq Data User's Guide

  2015cites this paper
• Activation of SIRT3 by the NAD⁺ precursor nicotinamide riboside protects from noise-induced hearing loss.

  2014cites this paper
• Auxiliary Subunits: Shepherding AMPA Receptors to the Plasma Membrane

  2014cites this paper
• Cadherin-7 regulates mossy fiber connectivity in the cerebellum.

  2014cites this paper
• Exploring the transcriptome of the brain

  2014cites this paper
• Transcriptomic changes in brain development.

  2014cites this paper
• OP-JBIO130015 331..338

  2013cites this paper
• Gene expression in the human brain: the current state of the study of specificity and spatiotemporal dynamics.

  2013cites this paper
• Auxiliary subunits provide new insights into regulation of AMPA receptor trafficking.

  2013cites this paper
• Linear Models for Microarray Data User's Guide (Now Including RNA-Seq Data Analysis)

  2013cites this paper
• Regulation of mammalian neuronal circuit development by CPG 15

  2012cites this paper
• The H3K27 Histone Demethylase Kdm6b (Jmjd3) is Induced by Neuronal Activity and Contributes to Neuronal Survival and Differentiation

  2012cites this paper
• Ligand‐gated ion channels: from genes to behaviour

  2012cites this paper
• Interacting Partners of AMPA-Type Glutamate Receptors

  2012cites this paper
• Role of MXD3 in Proliferation of DAOY Human Medulloblastoma Cells

  2012cites this paper
• Defined criteria for auxiliary subunits of glutamate receptors

  2012cites this paper
• A BOOTSTRAP-BASED NON-PARAMETRIC ANOVA METHOD WITH APPLICATIONS TO FACTORIAL MICROARRAY DATA

  2011cites this paper
• Control of synapse development and plasticity by Rho GTPase regulatory proteins.

  2011cites this paper
• Control of Neuronal Circuit Assembly by Gtpase Regulators

  2011cites this paper
• Transcription Factor Targets as Treatment for Medulloblastoma

  2011cites this paper
• The expanding social network of ionotropic glutamate receptors: TARPs and other transmembrane auxiliary subunits.

  2011cites this paper
• CPG15 regulates synapse stability in the developing and adult brain.

  2011cites this paper
• Temporal control of a dendritogenesis-linked gene via REST-dependent regulation of nuclear factor I occupancy

  2011cites this paper
• Development of Axon-Target Specificity of Ponto-Cerebellar Afferents

  2011cites this paper
• Current Neurobiology 2010; 1 (1): 77-81

  2010cites this paper
• Genetics and cell biology of building specific synaptic connectivity.

  2010cites this paper
• Identification of gene transcripts expressed by postsynaptic neurons during synapse formation encoding cell surface proteins with presumptive synaptogenic activity

  2010cites this paper
• SynDIG1 regulation of synaptic AMPA receptor targeting

  2010cites this paper
• Transcriptional regulation of gene expression clusters in motor neurons following spinal cord injury

  2010cites this paper
• SynDIG1: an activity-regulated, AMPA- receptor-interacting transmembrane protein that regulates excitatory synapse development.

  2010influential citation
• Novel Approaches to Studying the Genetic Basis of Cerebellar Development

  2010cites this paper
• Reduced blockade by extracellular Mg2+ is permissive to NMDA receptor activation in cerebellar granule neurons that model a migratory phenotype

  2010cites this paper
• Knockdown of the neuronal nitric oxide synthase gene retard the development of the cerebellar granule neurons in vitro

  2010cites this paper
• Research article Transcriptional regulation of gene expression clusters in motor neurons following spinal cord injury

  2010cites this paper
• Regulation of AMPA receptors by transmembrane accessory proteins

  2010cites this paper
• SHH Pathway and Cerebellar Development

  2009cites this paper
• From microarrays to mechanisms of brain development and function.

  2009cites this paper
• Gene Expression Profiling of Rat Cerebral Cortex Development Using cDNA Microarrays

  2009cites this paper
• One Decade Later: What has Gene Expression Profiling Told us About Neuronal Cell Types, Brain Function and Disease?

  2009influential citation
• An Internal Signal Sequence Directs Intramembrane Proteolysis of a Cellular Immunoglobulin Domain Protein*

  2008cites this paper
• Cerebellar development transcriptome database (CDT-DB): Profiling of spatio-temporal gene expression during the postnatal development of mouse cerebellum

  2008cites this paper
• A Novel Role of the Mad Family Member Mad3 in Cerebellar Granule Neuron Precursor Proliferation

  2007cites this paper
• alpha2-Chimaerin is an essential EphA4 effector in the assembly of neuronal locomotor circuits.

  2007cites this paper
• Differential effects of AMPA receptor activation on survival and neurite integrity during neuronal development.

  2007cites this paper
• There's more than one way to skin a chimaerin.

  2007cites this paper
• The diacylglycerol-binding protein alpha1-chimaerin regulates dendritic morphology.

  2006cites this paper
• Identification of conserved modes of expression profiles during hippocampal development and neuronal differentiation in vitro

  2006cites this paper
• Prediction of a key role of motifs binding E 2 F and NR 2 F in down-regulation of numerous genes during the development of the mouse hippocampus

  2006cites this paper
• A biphasic pattern of gene expression during mouse retina development

  2006cites this paper
• TheStopSignalRevised:ImmatureCerebellarGranule NeuronsintheExternalGerminalLayerArrestPontine MossyFiberGrowth

  2006cites this paper
• Mouse Full-Length cDNA Encyclopedia Targeting a Complex Transcriptome: The Construction of the

  2006cites this paper
• Microarrays and the microscope: balancing throughput with resolution

  2006cites this paper
• The Stop Signal Revised: Immature Cerebellar Granule Neurons in the External Germinal Layer Arrest Pontine Mossy Fiber Growth

  2006influential citation
• Transcriptional profiling of depolarization-dependent phenotypic alterations in primary cultures of developing granule neurons.

  2006cites this paper
• Anp32e/Cpd1 regulates protein phosphatase 2A activity at synapses during synaptogenesis

  2006influential citation
• The diacylglycerol-binding protein α1-chimaerin regulates dendritic morphology

  2006cites this paper
• Insights into GABA functions in the developing cerebellum.

  2005cites this paper
• Molecular networks perturbed in a developmental animal model of brain injury.

  2005cites this paper
• In Vivo and in Vitro Characterization of Novel Neuronal Plasticity Factors Identified following Spinal Cord Injury*

  2005cites this paper
• The Sp1-related transcription factors sp5 and sp5-like act downstream of Wnt/beta-catenin signaling in mesoderm and neuroectoderm patterning.

  2005cites this paper
• The cerebellar transcriptome during postnatal development of the Ts1Cje mouse, a segmental trisomy model for Down syndrome.

  2005cites this paper
• Neuronal subtype-specific genes that control corticospinal motor neuron development in vivo.

  2005cites this paper
• The SDF‐1/CXCR4 pathway and the development of the cerebellar system

  2005cites this paper
• Dynamic expression of de novo DNA methyltransferases Dnmt3a and Dnmt3b in the central nervous system

  2005cites this paper
• A pivotal role of calcineurin signaling in development and maturation of postnatal cerebellar granule cells.

  2005cites this paper
• limma: Linear Models for Microarray Data

  2005cites this paper
• Genetic networks controlling retinal injury.

  2005cites this paper
• Transcriptional control of synaptic differentiation by retrograde signals.

  2004cites this paper
• β1-Integrins Are Critical for Cerebellar Granule Cell Precursor Proliferation

  2004cites this paper
• Cellular and genetic regulation of the development of the cerebellar system.

  2004cites this paper
• Analyzing factorial designed microarray experiments

  2004cites this paper
• Exploiting microarrays to reveal differential gene expression in the nervous system

  2003cites this paper
• Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia.

  2003cites this paper
• Chipping away at brain function: mining for insights with microarrays.

  2003cites this paper
• Analysis of gene expression in the developing mouse retina

  2003cites this paper
• Gene profiling of hippocampal neuronal culture

  2003cites this paper
• Characterization of a Neurotrophin Signaling Mechanism that Mediates Neuron Survival in a Temporally Specific Pattern

  2003cites this paper
• Microtubules are critical for radial glial morphology: Possible regulation by MAPs and MARKs

  2003cites this paper
• The Effect of Irradiating a Transplanted Solid Sarcoma on the Subsequent Development of Metastases

  1974cites this paper