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Adsorption process of polar and nonpolar compounds in a nanopore model of humic substances

D. Tunega,M. Gerzabek,G. Haberhauer,H. Lischka,R. Šolc,A. Aquino

Published 2019 in European Journal of Soil Science

ABSTRACT

Humic substances (HSs) as a major part of soil organic matter (SOM) are complex combinations of natural organic matter, which are ubiquitous in the environment and occur predominantly in soils, residues and natural water. They play a crucial role in the fate and behaviour of contaminants in the environment. In this work, an HS nanopore model was based on a structural motif containing polar and nonpolar domains. The polar domain was represented by the carboxyl groups that predominate in the composition of HSs, whereas the nonpolar domain was constructed by aliphatic chains. The effect of hydrophobic/hydrophilic interactions on sorption in HSs was analysed by the inclusion of the nonpolar polycyclic aromatic hydrocarbon naphthalene and the polar herbicide 2‐methyl‐4‐chlorophenoxyacetic acid (MCPA) in the nanopore. Water cluster was also included to allow the formation of the water molecular bridges (WaMB), which stabilized the whole system. Thermodynamic potential‐of‐mean‐force (PMF) calculations by means of classical molecular dynamics simulations were performed to investigate the effect of polar and nonpolar domains in the adsorption mechanism. The polar MCPA molecule was stabilized at the hydrophilic water–HS interface, whereas nonpolar naphthalene was stabilized inside of the hydrophobic nanovoid of the HS nanopore model. The obtained results demonstrated that the adsorption strength of HSs regarding polar and nonpolar species is similar, but the adsorption mechanisms differ.

PUBLICATION RECORD

  • Publication year

    2019

  • Venue

    European Journal of Soil Science

  • Publication date

    2019-08-08

  • Fields of study

    Chemistry, Environmental Science

  • Identifiers
    DOI 10.1111/ejss.12865
  • External record

    Open on Semantic Scholar

  • Source metadata

    Semantic Scholar

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