Identification of Ty1-copia retrotransposons in three ectomycorrhizal basidiomycetes: evolutionary relationships and use as molecular markers

No abstract is available for this paper.

• Publication year

  2003

• Venue

  Current Genetics

• Publication date

  2003-02-04

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1007/s00294-002-0363-2PMID 12684843
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Fungal transposable elements and genome evolution

  2004influential reference
• Transposable element contributions to plant gene and genome evolution

  2004cited by this paper
• PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]

  2004cited by this paper
• Development of S-SAP markers based on an LTR-like sequence from Medicago sativa L.

  2002cited by this paper
• Plant transposable elements: where genetics meets genomics

  2002cited by this paper
• Nht2, a copia LTR retrotransposon from a conditionally dispensable chromosome in Nectria haematococca

  2002cited by this paper
• Phylogeography of the ectomycorrhizal Pisolithus species as inferred from nuclear ribosomal DNA ITS sequences

  2002cited by this paper
• SCAR markers to detect mycorrhizas of an American Laccaria bicolor strain inoculated in European Douglas-fir plantations

  2002cited by this paper
• RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs.

  2001cited by this paper
• PERSPECTIVE: TRANSPOSABLE ELEMENTS, PARASITIC DNA, AND GENOME EVOLUTION

  2001cited by this paper
• The molecular revolution in ectomycorrhizal ecology: peeking into the black‐box

  2001cited by this paper
• Molecular Cloning: A Laboratory Manual

  2001cited by this paper
• Viewing the ribosome and visiting the nucleolus at Lake Tahoe.

  2001cited by this paper
• RNA: Guiding Gene Silencing

  2001cited by this paper
• Diversity, origin, and distribution of retrotransposons (gypsy and copia) in conifers.

  2001cited by this paper
• The degenerate DNA transposon Pat and repeat-induced point mutation (RIP) in Podospora anserina

  2000cited by this paper
• Mycorrhiza in plantation forestry.

  2000cited by this paper
• Effect of Laccaria bicolor strains inoculated on Douglas-fir (Pseudotsuga menziesii) several years after nursery inoculation

  2000influential reference
• marY1, a Member of the gypsyGroup of Long Terminal Repeat Retroelements from the Ectomycorrhizal Basidiomycete Tricholoma matsutake

  2000cited by this paper
• Evolutionary dynamics of Ty1-copia group retrotransposons in grass shown by reverse transcriptase domain analysis.

  1999cited by this paper
• The rde-1 gene, RNA interference, and transposon silencing in C. elegans.

  1999cited by this paper
• Evidence for the recent horizontal transfer of long terminal repeat retrotransposon.

  1999cited by this paper
• The Tpv2 family of retrotransposons of Phaseolus vulgaris: structure, integration characteristics, and use for genotype classification

  1999cited by this paper
• The distribution and copy number of copia-like retrotransposons in rice (Oryza sativa L.) and their implications in the organization and evolution of the rice genome.

  1999cited by this paper
• Phylogeny and transpositional activity of Ty1-copia group retrotransposons in cereal genomes

  1999cited by this paper
• IRAP and REMAP: two new retrotransposon-based DNA fingerprinting techniques

  1999influential reference
• Plant retrotransposons.

  1999cited by this paper
• Structure and Dynamics of Experimentally Introduced and Naturally Occurring Laccaria sp. Discrete Genotypes in a Douglas Fir Plantation

  1999cited by this paper
• Identification of ectomycorrhizae formed betweenTricholoma matsutake andPinus densiflora by polymerase chain reaction (PCR) targeting retroelement coding regions

  1999cited by this paper
• Structure of the Chromosome VII Centromere Region in Neurospora crassa: Degenerate Transposons and Simple Repeats

  1998cited by this paper
• Survival of an introduced ectomycorrhizal Laccaria bicolor strain in a European forest plantation monitored by mitochondrial ribosomal DNA analysis.

  1998cited by this paper
• Temporal persistence and spatial distribution of an American inoculant strain of the ectomycorrhizal basidiomycete Laccaria bicolor in a French forest plantation

  1998cited by this paper
• Transposons in filamentous fungi—facts and perspectives

  1998cited by this paper
• Highly heterogeneous families of Ty1/copia retrotransposons in the Lycopersicon chilense genome.

  1998cited by this paper
• Genetic distribution of Bare–1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)

  1997cited by this paper
• Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

  1997cited by this paper
• Mycorrhizal Symbiosis 2nd ed

  1997cited by this paper
• Variations in symbiotic efficiency, phenotypic characters and ploidy level among different isolates of the ectomycorrhizal basidiomycete Laccaria bicolor strain S 238

  1996influential reference
• TreeView: an application to display phylogenetic trees on personal computers

  1996cited by this paper
• Meiotic segregation and recombination of the intergenic spacer of the ribosomal DNA in the ectomycorrhizal basidiomycete Laccaria bicolor

  1996cited by this paper
• Nested Retrotransposons in the Intergenic Regions of the Maize Genome

  1996cited by this paper
• Retrotransposons of rice involved in mutations induced by tissue culture.

  1996cited by this paper
• Native DNA repeats and methylation in Ascobolus.

  1996cited by this paper
• Fungal origin by horizontal transfer of a plant mitochondrial group I intron in the chimeric coxI gene of Peperomia

  1995cited by this paper
• Monitoring the persistence of Laccaria bicolor as an ectomycorrhizal symbiont of nursery‐grown Douglas fir by PCR of the rDNA intergenic spacer

  1994influential reference
• A new generation of information retrieval tools for biologists: the example of the ExPASy WWW server.

  1994influential reference
• Retroelements in higher plants.

  1992cited by this paper
• copia-like retrotransposons are ubiquitous among plants.

  1992cited by this paper
• Repeat-induced G-C to A-T mutations in Neurospora.

  1989cited by this paper
• Phylogeny of some Fusarium species, as determined by large-subunit rRNA sequence comparison.

  1989cited by this paper
• Multiple sequence alignment with hierarchical clustering.

  1988cited by this paper
• Predicting DNA duplex stability from the base sequence.

  1986cited by this paper
• [Evolution of protein molecules. I. Protein synthesis].

  1972cited by this paper
• CHAPTER 24 – Evolution of Protein Molecules

  1969cited by this paper

• Microalgal EPS as a bio-flocculant for sustainable biomass harvesting: a review

  2025cites this paper
• Biology, dynamics, and applications of transposable elements in basidiomycete fungi

  2017cites this paper
• Genome-wide survey of repetitive DNA elements in the button mushroom Agaricus bisporus.

  2013cites this paper
• Molecular markers in the studies of genetic diversity of edible and medicinal fungi

  2013cites this paper
• Characterization of Transposable Elements in the Ectomycorrhizal Fungus Laccaria bicolor

  2012cites this paper
• Generation of a cDNA library reveals the presence of a Ty-1/copia transposon in Phellinus rimosus (Hymenochaetaceae, Basidiomycota)

  2012influential citation
• Development of IRAP-SCAR marker for strain identification in Lentinula edodes

  2011cites this paper
• Sequence-specific amplified polymorphism (ssap) technique to analyse Fusarium oxysporum f. sp. lactucae vcg 0300 isolate from lettuce

  2008cites this paper
• Patterns of Diversity in Populations of the Turfgrass Pathogen Colletotrichum cereale as Revealed by Transposon Fingerprint Profiles

  2008cites this paper
• Identification of Race 1 of Fusarium oxysporum f. sp. lactucae on Lettuce by Inter-Retrotransposon Sequence-Characterized Amplified Region Technique.

  2007cites this paper
• IRAP and REMAP for retrotransposon-based genotyping and fingerprinting

  2006cites this paper
• Structure and transcriptional impact of divergent repetitive elements inserted within Phanerochaete chrysosporium strain RP-78 genes

  2006cites this paper
• Genetic relationships of Diospyros kaki Thunb. and related species revealed by IRAP and REMAP analysis.

  2006cites this paper
• Highly polymorphic DNA markers to specify strains of the ectomycorrhizal basidiomycete Tricholoma matsutake based on σmarY1, the long terminal repeat of gypsy-type retroelement marY1

  2005cites this paper
• Repeat-Induced Point Mutation and the Population Structure of Transposable Elements in Microbotryum violaceum

  2005cites this paper
• Molecular analysis of the LTR retrotransposon Ylt1 from the genome of dimorphic fungus Yarrowia lipolytica

  2005cites this paper
• Repetitive DNA in the automictic fungus Microbotryum violaceum

  2005influential citation