Replication Fork Reversal Occurs Spontaneously after Digestion but Is Constrained in Supercoiled Domains*

M. Fierro-Fernández,P. Hernández,D. Krimer,J. Schvartzman

Published 2007 in Journal of Biological Chemistry

ABSTRACT

Replication fork reversal was investigated in undigested and linearized replication intermediates of bacterial DNA plasmids containing a stalled fork. Two-dimensional agarose gel electrophoresis, a branch migration and extrusion assay, electron microscopy, and DNA-psoralen cross-linking were used to show that extensive replication fork reversal and extrusion of the nascent-nascent duplex occurs spontaneously after DNA nicking and restriction enzyme digestion but that fork retreat is severely limited in covalently closed supercoiled domains.

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