What do we know about ribosomal RNA methylation in Escherichia coli?

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Biochimie

• Publication date

  2015-10-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/j.biochi.2014.11.019PMID 25511423
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Purification, crystallization and preliminary crystallographic analysis of the 16S rRNA methyltransferase RsmI from Escherichia coli.

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• Role of the Ribosomal P-Site Elements of m2G966, m5C967, and the S9 C-Terminal Tail in Maintenance of the Reading Frame during Translational Elongation in Escherichia coli

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• Modified nucleotides m2G966/m5C967 of Escherichia coli 16S rRNA are required for attenuation of tryptophan operon

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• The Escherichia coli RlmN methyltransferase is a dual-specificity enzyme that modifies both rRNA and tRNA and controls translational accuracy.

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  2012cited by this paper
• MODOMICS: a database of RNA modification pathways—2013 update

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• Impact of methylations of m2G966/m5C967 in 16S rRNA on bacterial fitness and translation initiation

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• The last rRNA methyltransferase of E. coli revealed: the yhiR gene encodes adenine-N6 methyltransferase specific for modification of A2030 of 23S ribosomal RNA.

  2012cited by this paper
• Real-time assembly landscape of bacterial 30S translation initiation complex

  2012cited by this paper
• Regulation of expression and catalytic activity of Escherichia coli RsmG methyltransferase.

  2012cited by this paper
• Crystal and solution structures of methyltransferase RsmH provide basis for methylation of C1402 in 16S rRNA.

  2012cited by this paper
• YhiQ is RsmJ, the methyltransferase responsible for methylation of G1516 in 16S rRNA of E. coli.

  2012cited by this paper
• Fitness Cost and Interference of Arm/Rmt Aminoglycoside Resistance with the RsmF Housekeeping Methyltransferases

  2012cited by this paper
• Properties of small rRNA methyltransferase RsmD: mutational and kinetic study.

  2012cited by this paper
• Phenotypic landscape of a bacterial cell.

  2011cited by this paper
• RNA methylation by Radical SAM enzymes RlmN and Cfr proceeds via methylene transfer and hydride shift

  2011cited by this paper
• Structural and Functional Characterization of Rv2966c Protein Reveals an RsmD-like Methyltransferase from Mycobacterium tuberculosis and the Role of Its N-terminal Domain in Target Recognition*

  2011cited by this paper
• Base methylations in the double-stranded RNA by a fused methyltransferase bearing unwinding activity

  2011cited by this paper
• Mutations in gidB Confer Low-Level Streptomycin Resistance in Mycobacterium tuberculosis

  2011cited by this paper
• Methylated 23S rRNA nucleotide m2G1835 of Escherichia coli ribosome facilitates subunit association.

  2011cited by this paper
• Low Fitness Cost of the Multidrug Resistance Gene cfr

  2011cited by this paper
• Modifications of ribosomal RNA: From enzymes to function

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• Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function.

  2010cited by this paper
• Specificity and kinetics of 23S rRNA modification enzymes RlmH and RluD.

  2010cited by this paper
• YgdE is the 2′‐O‐ribose methyltransferase RlmM specific for nucleotide C2498 in bacterial 23S rRNA

  2009cited by this paper
• Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA

  2009cited by this paper
• A conserved rRNA methyltransferase regulates ribosome biogenesis

  2008cited by this paper
• YccW is the m5C methyltransferase specific for 23S rRNA nucleotide 1962.

  2008cited by this paper
• RNA folding and ribosome assembly.

  2008cited by this paper
• Identification of pseudouridine methyltransferase in Escherichia coli.

  2008cited by this paper
• The ybiN gene of Escherichia coli encodes adenine-N6 methyltransferase specific for modification of A1618 of 23 S ribosomal RNA, a methylated residue located close to the ribosomal exit tunnel.

  2008cited by this paper
• Mechanistic insight into the ribosome biogenesis functions of the ancient protein KsgA

  2008cited by this paper
• YbeA is the m3Psi methyltransferase RlmH that targets nucleotide 1915 in 23S rRNA.

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• The methyltransferase YfgB/RlmN is responsible for modification of adenosine 2503 in 23S rRNA.

  2007cited by this paper
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• The geometry of the ribosomal polypeptide exit tunnel.

  2006cited by this paper
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  2006cited by this paper
• The structure of the RNA m5C methyltransferase YebU from Escherichia coli reveals a C-terminal RNA-recruiting PUA domain.

  2006cited by this paper
• Identification of Escherichia coli m2G methyltransferases: II. The ygjO gene encodes a methyltransferase specific for G1835 of the 23 S rRNA.

  2006cited by this paper
• Involvement of Helix 34 of 16 S rRNA in Decoding and Translocation on the Ribosome*

  2006cited by this paper
• Mutations in the Intersubunit Bridge Regions of 23 S rRNA*

  2006cited by this paper
• YebU is a m5C methyltransferase specific for 16 S rRNA nucleotide 1407.

  2006cited by this paper
• The adenosine dimethyltransferase KsgA recognizes a specific conformational state of the 30S ribosomal subunit.

  2006cited by this paper
• Identification and characterization of RsmE, the founding member of a new RNA base methyltransferase family.

  2006cited by this paper
• Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2'-O-methylations in 16S and 23S rRNAs.

  2006cited by this paper
• U2552 methylation at the ribosomal A-site is a negative modulator of translational accuracy.

  2005cited by this paper
• Symmetry at the active site of the ribosome: structural and functional implications

  2005cited by this paper
• A new mechanism for chloramphenicol, florfenicol and clindamycin resistance: methylation of 23S ribosomal RNA at A2503

  2005cited by this paper
• The archaeon Haloarcula marismortui has few modifications in the central parts of its 23S ribosomal RNA.

  2005cited by this paper
• Streptomycin interferes with conformational coupling between codon recognition and GTPase activation on the ribosome

  2004cited by this paper
• Crystal structure of KsgA, a universally conserved rRNA adenine dimethyltransferase in Escherichia coli.

  2004cited by this paper
• Methylation of 23S rRNA nucleotide G745 is a secondary function of the RlmAI methyltransferase.

  2004cited by this paper
• Identifying the methyltransferases for m(5)U747 and m(5)U1939 in 23S rRNA using MALDI mass spectrometry.

  2003cited by this paper
• Identifying the methyltransferases for m5U747 and m5U1939 in 23S rRNA using MALDI mass spectrometry

  2003cited by this paper
• Characterization of the 23 S Ribosomal RNA m5U1939 Methyltransferase from Escherichia coli *

  2002cited by this paper
• Overexpression of Two Different GTPases Rescues a Null Mutation in a Heat-Induced rRNA Methyltransferase

  2002cited by this paper
• Methylation at nucleotide G745 or G748 in 23S rRNA distinguishes Gram‐negative from Gram‐positive bacteria

  2002cited by this paper
• Pseudouridines and pseudouridine synthases of the ribosome.

  2001cited by this paper
• EmtA, a rRNA methyltransferase conferring high‐level evernimicin resistance

  2001cited by this paper
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  2001cited by this paper
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  2001cited by this paper
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  1996cited by this paper
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  1993cited by this paper
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  1991cited by this paper
• Sites of interaction of the CCA end of peptidyl-tRNA with 23S rRNA.

  1991cited by this paper
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  1988cited by this paper
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  1987cited by this paper
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  1984cited by this paper
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  1979cited by this paper

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  2016cites this paper
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  2016cites this paper
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