Genomic organization of Polycomb Response Elements and its functional implication in Drosophila and other insects

No abstract is available for this paper.

• Publication year

  2020

• Venue

  Journal of Biosciences

• Publication date

  2020-01-20

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1007/s12038-019-9975-2PMID 31965990
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Epigenetics in Insects: Genome Regulation and the Generation of Phenotypic Diversity.

  2019cited by this paper
• REDfly: the transcriptional regulatory element database for Drosophila

  2018cited by this paper
• Hymenoptera Genome Database: Using HymenopteraMine to Enhance Genomic Studies of Hymenopteran Insects.

  2018cited by this paper
• Dual functionality of cis-regulatory elements as developmental enhancers and Polycomb response elements

  2017cited by this paper
• High-resolution TADs reveal DNA sequences underlying genome organization in flies

  2017cited by this paper
• Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression

  2017cited by this paper
• Polycomb-mediated chromatin loops revealed by a subkilobase-resolution chromatin interaction map

  2017cited by this paper
• The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species

  2016cited by this paper
• Combgap contributes to recruitment of Polycomb group proteins in Drosophila

  2016cited by this paper
• Specific combinations of boundary element and Polycomb response element are required for the regulation of the Hox genes in Drosophila melanogaster.

  2015cited by this paper
• The UCSC Genome Browser database: 2016 update

  2015cited by this paper
• A massive expansion of effector genes underlies gall-formation in the wheat pest Mayetiola destructor.

  2015cited by this paper
• High-resolution mapping defines the cooperative architecture of Polycomb response elements

  2014cited by this paper
• Cooperativity, specificity, and evolutionary stability of Polycomb targeting in Drosophila.

  2014cited by this paper
• VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases

  2014cited by this paper
• The i5K Initiative: advancing arthropod genomics for knowledge, human health, agriculture, and the environment.

  2013cited by this paper
• Compound cis-regulatory elements with both boundary and enhancer sequences in the human genome

  2013cited by this paper
• Polycomb group response elements in Drosophila and vertebrates.

  2013cited by this paper
• The UCSC Genome Browser database: 2014 update

  2013influential reference
• Genome-wide polycomb target gene prediction in Drosophila melanogaster

  2012cited by this paper
• Chromatin domain boundary element search tool for Drosophila

  2012cited by this paper
• Polycomb proteins in mammalian cell differentiation and plasticity

  2011cited by this paper
• Quantitative analysis of polycomb response elements (PREs) at identical genomic locations distinguishes contributions of PRE sequence and genomic environment

  2011cited by this paper
• Genome Sequence of the Pea Aphid Acyrthosiphon pisum

  2010cited by this paper
• Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species

  2010cited by this paper
• Characterization of the Polycomb Group Response Elements of the Drosophila melanogaster invected Locus

  2009cited by this paper
• Recruitment of Polycomb group complexes and their role in the dynamic regulation of cell fate choice

  2009cited by this paper
• SilkDB v2.0: a platform for silkworm (Bombyx mori ) genome biology

  2009cited by this paper
• Functional Anatomy of Polycomb and Trithorax Chromatin Landscapes in Drosophila Embryos

  2009cited by this paper
• Programming of gene expression by Polycomb group proteins.

  2008cited by this paper
• Dynamic regulation by polycomb group protein complexes controls pattern formation and the cell cycle in Drosophila.

  2008cited by this paper
• The DNA-binding Polycomb-group protein Pleiohomeotic maintains both active and repressed transcriptional states through a single site

  2008cited by this paper
• Evolutionary Plasticity of Polycomb/Trithorax Response Elements in Drosophila Species

  2008cited by this paper
• The role of chromatin during transcription.

  2007cited by this paper
• Polycomb/Trithorax response elements and epigenetic memory of cell identity

  2007cited by this paper
• Genome regulation by polycomb and trithorax proteins.

  2007cited by this paper
• Using FlyAtlas to identify better Drosophila melanogaster models of human disease

  2007cited by this paper
• Evolution of genes and genomes on the Drosophila phylogeny

  2007cited by this paper
• A bivalent chromatin structure marks key developmental genes in embryonic stem cells.

  2006cited by this paper
• jPREdictor: a versatile tool for the prediction of cis-regulatory elements

  2006cited by this paper
• Efficient and Specific Targeting of Polycomb Group Proteins Requires Cooperative Interaction between Grainyhead and Pleiohomeotic

  2006cited by this paper
• Genomic Organization of gypsy Chromatin Insulators in Drosophila melanogaster

  2006cited by this paper
• Chromosomal Distribution of PcG Proteins during Drosophila Development

  2006cited by this paper
• Genome-wide analysis of Polycomb targets in Drosophila melanogaster

  2006cited by this paper
• Genome-wide profiling of PRC1 and PRC2 Polycomb chromatin binding in Drosophila melanogaster

  2006cited by this paper
• Histone trimethylation and the maintenance of transcriptional ON and OFF states by trxG and PcG proteins.

  2006cited by this paper
• The Mcp element mediates stable long-range chromosome-chromosome interactions in Drosophila.

  2006cited by this paper
• Recruitment of Drosophila Polycomb group proteins to chromatin by DSP1

  2005cited by this paper
• An Sp1/KLF binding site is important for the activity of a Polycomb group response element from the Drosophila engrailed gene

  2005cited by this paper
• Epigenetic regulation of cellular memory by the Polycomb and Trithorax group proteins.

  2004cited by this paper
• The Drosophila pho-like gene encodes a YY1-related DNA binding protein that is redundant with pleiohomeotic in homeotic gene silencing

  2003cited by this paper
• Genome-wide prediction of Polycomb/Trithorax response elements in Drosophila melanogaster.

  2003cited by this paper
• Composite cis-Acting Epigenetic Switches in Eukaryotes: Lessons from Drosophila Fab-7 for the Igf2–H19 Imprinted Domain

  2003cited by this paper
• A test of insulator interactions in Drosophila

  2003cited by this paper
• Identification of a multicopy chromatin boundary element at the borders of silenced chromosomal domains

  2002cited by this paper
• Pairing-sensitive silencing, polycomb group response elements, and transposon homing in Drosophila.

  2002cited by this paper
• Mechanisms of transcriptional memory

  2001cited by this paper
• The iab-7 Polycomb Response Element Maps to a Nucleosome-Free Region of Chromatin and Requires Both GAGA and Pleiohomeotic for Silencing Activity

  2001cited by this paper
• The Fab-8 boundary defines the distal limit of the bithorax complex iab-7 domain and insulates iab-7 from initiation elements and a PRE in the adjacent iab-8 domain.

  2000cited by this paper
• Featured Organism: Drosophila melanogaster

  2000cited by this paper
• The mcp element from the Drosophila melanogaster bithorax complex mediates long-distance regulatory interactions.

  1999cited by this paper
• A conserved sequence motif in Polycomb-response elements.

  1998cited by this paper
• The Drosophila Polycomb group gene pleiohomeotic encodes a DNA binding protein with homology to the transcription factor YY1.

  1998cited by this paper
• Co‐localization of Polycomb protein and GAGA factor on regulatory elements responsible for the maintenance of homeotic gene expression

  1997cited by this paper
• Mcp and Fab-7: molecular analysis of putative boundaries of cis-regulatory domains in the bithorax complex of Drosophila melanogaster.

  1994cited by this paper
• A Polycomb response element in the Ubx gene that determines an epigenetically inherited state of repression.

  1994cited by this paper
• Sequence of scs and scs' Drosophila DNA fragments with boundary function in the control of gene expression.

  1992cited by this paper

• Initiators counteract Polycomb repression and stimulate long-range contacts between enhancers and the Abdominal-B promoter in Drosophila

  2025cites this paper
• Histone H2A monoubiquitination marks are targeted to specific sites by cohesin subunits in Arabidopsis

  2023cites this paper
• Polycomb safeguards imaginal disc specification through control of the Vestigial-Scalloped complex

  2023cites this paper
• Polycomb safeguards imaginal disc specification through control of the Vestigial-Scalloped complex.

  2023cites this paper
• CRISPR/Cas9 and FLP-FRT mediated multi-modular engineering of the cis-regulatory landscape of the bithorax complex of Drosophila melanogaster

  2022cites this paper
• Genomic organization of the autonomous regulatory domain of eyeless locus in Drosophila melanogaster

  2021cites this paper
• Homeotic Genes: Clustering, Modularity, and Diversity

  2021cites this paper
• Lessons on gene regulation learnt from the Drosophila melanogaster bithorax complex.

  2020cites this paper