Molecular Evolution and Phylogenetic Utility of the Internal Transcribed Spacer 2 (ITS2) in Calyptratae (Diptera: Brachycera)

No abstract is available for this paper.

• Publication year

  2008

• Venue

  Journal of Molecular Evolution

• Publication date

  2008-10-11

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1007/s00239-008-9144-yPMID 18850061
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Pan-eukaryote ITS2 homologies revealed by RNA secondary structure

  2007cited by this paper
• SEQUENCE ANALYSIS OF THE RIBOSOMAL DNA INTERNAL TRANSCRIBED SPACERS AND 5.8S RIBOSOMAL RNA GENE IN REPRESENTATIVES OF THE CLAM FAMILY VENERIDAE (MOLLUSCA: BIVALVIA)

  2006influential reference
• Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures.

  2005cited by this paper
• The internal transcribed spacer of nuclear ribosomal DNA in the gymnosperm Gnetum.

  2005influential reference
• A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota.

  2005influential reference
• Secondary structure models of the nuclear internal transcribed spacer regions and 5.8S rRNA in Calciodinelloideae (Peridiniaceae) and other dinoflagellates.

  2004cited by this paper
• MEGA (Molecular Evolutionary Genetics Analysis)

  2004influential reference
• Intragenomic variation of the rDNA internal transcribed spacers in sponges (Phylum Porifera): implications for phylogenetic studies.

  2004cited by this paper
• Phylogenetic utility of the ribosomal internal transcribed spacer 2 in Strumigenys spp. (Hymenoptera: Formicidae).

  2004influential reference
• The advantages of the ITS2 region of the nuclear rDNA cistron for analysis of phylogenetic relationships of insects: a Drosophila example.

  2004influential reference
• ITS2 is a double-edged tool for eukaryote evolutionary comparisons.

  2003influential reference
• The evolution of myiasis in blowflies (Calliphoridae).

  2003influential reference
• ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae.

  2003influential reference
• Mfold web server for nucleic acid folding and hybridization prediction

  2003influential reference
• Dynamic conformational model for the role of ITS2 in pre-rRNA processing in yeast.

  2002cited by this paper
• Evolution of the secondary structure of the rRNA internal transcribed spacer 2 (ITS2) in hard ticks (Ixodidae, Arthropoda)

  2002influential reference
• PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10

  2002influential reference
• Exploring the Phylogenetic Utility of ITS Sequences for Animals: A Test Case for Abalone (Haliotis)

  2002cited by this paper
• Selection intensity against deleterious mutations in RNA secondary structures and rate of compensatory nucleotide substitutions.

  2001cited by this paper
• MEGA2: molecular evolutionary genetics analysis software

  2001influential reference
• Extreme length and length variation in the first ribosomal internal transcribed spacer of ladybird beetles (Coleoptera: Coccinellidae).

  2001cited by this paper
• Molecular phylogeny of Calyptratae (Diptera: Brachycera): the evolution of 18S and 16S ribosomal rDNAs in higher dipterans and their use in phylogenetic inference

  2001influential reference
• Mutation scanning analysis of sequence heterogeneity in the second internal transcribed spacer (rDNA) within some members of the Hypodontus macropi (Nematoda: Strongyloidea) complex

  2001cited by this paper
• RNA sequence evolution with secondary structure constraints: comparison of substitution rate models using maximum-likelihood methods.

  2001cited by this paper
• Phylogenetic analysis of Phlebotomus species belonging to the subgenus Larroussius (Diptera, psychodidae) by ITS2 rDNA sequences.

  2000cited by this paper
• Sequence, secondary structure and phylogenetic analyses of the ribosomal internal transcribed spacer 2 (ITS2) in the Timarcha leaf beetles (Coleoptera: Chrysomelidae)

  2000cited by this paper
• Phylogenetic relationships among Muscoidea (Diptera: Calyptratae) based on mitochondrial DNA sequences

  2000influential reference
• Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure.

  1999influential reference
• Algorithms and Thermodynamics for RNA Secondary Structure Prediction: A Practical Guide

  1999influential reference
• Ribosomal internal transcribed spacer 2 (ITS2) exhibits a common core of secondary structure in vertebrates and yeast.

  1999cited by this paper
• DNA sequence analysis of the ribosomal DNA ITS2 region for the Anopheles punctulatus group of mosquitoes

  1999cited by this paper
• Congruence and controversy: toward a higher-level phylogeny of Diptera.

  1999influential reference
• RNA Biochemistry and Biotechnology

  1999cited by this paper
• Molecular evolution of the internal transcribed spacers (ITS1 and ITS2) and phylogenetic relationships among species of the family Cucurbitaceae.

  1998influential reference
• Trematode and Monogenean rRNA ITS2 Secondary Structures Support a Four-Domain Model

  1998influential reference
• The Calliphoridae (Blowflies) (Diptera: Oestroidea) are Not a Monophyletic Group 1

  1997influential reference
• The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications.

  1997cited by this paper
• The Internal Transcribed Spacer 2 Exhibits a Common Secondary Structure in Green Algae and Flowering Plants

  1997influential reference
• NATO ASI Series

  1997cited by this paper
• Erratum: The ITS region of nuclear ribosomal DNA: A valuable source of evidence on angiosperm phylogeny (Annals of the Missouri Botanical Garden (1995) 82 (247-277))

  1996cited by this paper
• Mitochondrial Dna Sequence of Cytochrome Oxidase II from Calliphora erythrocephala: Evolution of Blowflies (Diptera: Calliphoridae)

  1996influential reference
• Deep-level diagnostic value of the rDNA-ITS region.

  1996cited by this paper
• Conservation patterns in angiosperm rDNA ITS2 sequences.

  1996cited by this paper
• Evolutionarily conserved structural elements are critical for processing of Internal Transcribed Spacer 2 from Saccharomyces cerevisiae precursor ribosomal RNA.

  1995cited by this paper
• Erratum: The ITS Region of Nuclear Ribosomal DNAZ: A Valuable Source of Evidence on Angiosperm Phylogeny

  1995cited by this paper
• Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.

  1994cited by this paper
• Usefulness of Internal Transcribed Spacer Regions of Ribosomal Dna in Melanopline (Orthoptera: Acrididae) Systematics

  1994cited by this paper
• Sequence analysis of the ribosomal DNA internal transcribed spacer 2 from populations of Anopheles nuneztovari (Diptera: Culicidae).

  1994influential reference
• Separate structural elements within internal transcribed spacer 1 of Saccharomyces cerevisiae precursor ribosomal RNA direct the formation of 17S and 26S rRNA.

  1994cited by this paper
• Comparative evolutionary analysis of rDNA ITS regions in Drosophila.

  1994influential reference
• Functional analysis of internal transcribed spacer 2 of Saccharomyces cerevisiae ribosomal DNA.

  1992cited by this paper
• Distribution of split 5.8S ribosomal RNA in Diptera

  1992cited by this paper
• Phylogeny of the Tachinidae family-group lDipterac Calyptrataer

  1992influential reference
• Sequence and secondary structure comparisons of ITS rDNA in mosquitoes (Diptera: Culicidae).

  1992cited by this paper
• Evolution of compensatory substitutions through G.U intermediate state in Drosophila rRNA.

  1991cited by this paper
• Blowflies (Diptera, Calliphoridae) of Fennoscandia and Denmark

  1990cited by this paper
• Phylogeny and classification of the Muscomorpha

  1989influential reference
• A 28s ribosomal RNA phylogeny of certain cyclorrhaphous Diptera based upon a hypervariable region

  1989influential reference
• Molecular Evolutionary Genetics

  1987cited by this paper
• Evolutionary divergence of promoters and spacers in the rDNA family of four Drosophila species. Implications for molecular coevolution in multigene families.

  1987cited by this paper
• Evolution of Ribosomal DNA

  1985cited by this paper
• The role of compensatory neutral mutations in molecular evolution

  1985cited by this paper

• Museomics and protein-encoding ultraconserved elements illuminate the evolution of life history and phallic morphology of flesh flies (Diptera: Sarcophagidae)

  2021cites this paper
• Museomics and phylogenomics with protein-encoding ultraconserved elements illuminate the evolution of life history and phallic morphology of flesh flies (Diptera: Sarcophagidae)

  2021cites this paper
• Genetic diversity analysis of Dermacentor nuttalli within Inner Mongolia, China

  2020cites this paper
• Protein‐encoding ultraconserved elements provide a new phylogenomic perspective of Oestroidea flies (Diptera: Calyptratae)

  2020cites this paper
• Phylogenomic analysis of Calyptratae: resolving the phylogenetic relationships within a major radiation of Diptera

  2019cites this paper
• Phylogeny, evolution and male terminalia functionality of Sarcophaginae (Diptera: Sarcophagidae)

  2018cites this paper
• The Battle Against Flystrike - Past Research and New Prospects Through Genomics.

  2017cites this paper
• Phylogenetic inference of calyptrates, with the first mitogenomes for Gasterophilinae (Diptera: Oestridae) and Paramacronychiinae (Diptera: Sarcophagidae)

  2016cites this paper
• Phenotypic polymorphism of Chrysomya albiceps (Wiedemann) (Diptera: Calliphoridae) may lead to species misidentification.

  2016cites this paper
• Large-scale mitogenomics enables insights into Schizophora (Diptera) radiation and population diversity

  2016cites this paper
• Phylogeny of the Peckia-genus group: evolution of male genitalia in the major necrophagous guild of Neotropical flesh flies (Diptera: Sarcophagidae)

  2015cites this paper
• Technical Note: "Mitochondrial and nuclear DNA approaches for reliable identification of Lucilia (Diptera, Calliphoridae) species of forensic interest from Southern Europe".

  2015cites this paper
• The ITS region of groundwater amphipods: length, secondary structure and phylogenetic information content in Crangonyctoids and Niphargids

  2013cites this paper
• Molecular phylogenetics in 2D: ITS2 rRNA evolution and sequence-structure barcode from Veneridae to Bivalvia.

  2012cites this paper
• Molecular Analysis of Medically and Veterinary Important Muscid Flies (Diptera: Muscidae) in Thailand

  2012cites this paper
• Why is the molecular identification of the forensically important blowfly species Lucilia caesar and L. illustris (family Calliphoridae) so problematic?

  2012cites this paper
• Cutaneous myiasis caused by Dermatobia hominis in Thai travelers: first report in Thailand

  2012cites this paper
• Evaluation of the internal transcribed spacer 2 (ITS2) as a molecular marker for phylogenetic inference using sequence and secondary structure information in blow flies (Diptera: Calliphoridae)

  2011cites this paper
• Molecular phylogeny of the Calyptratae (Diptera: Cyclorrhapha) with an emphasis on the superfamily Oestroidea and the position of Mystacinobiidae and McAlpine's fly

  2010influential citation
• [DNA barcoding the medicinal plants of the genus Paris].

  2010cites this paper
• Legs of deception: disagreement between molecular markers and morphology of long‐legged flies (Diptera, Dolichopodidae)

  2009cites this paper
• The Thai

  year unknowninfluential citation