Identification of Xanthomonas campestris pv. campestris galactose utilization genes from transcriptome data.

No abstract is available for this paper.

• Publication year

  2008

• Venue

  Journal of Biotechnology

• Publication date

  2008-06-30

• Fields of study

  Biology, Medicine, Chemistry, Environmental Science

• Identifiers
  DOI 10.1016/j.jbiotec.2008.04.011PMID 18538881
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.

  2008cited by this paper
• BRENDA, AMENDA and FRENDA: the enzyme information system in 2007

  2007cited by this paper
• Type I and type IV pili of Xylella fastidiosa affect twitching motility, biofilm formation and cell-cell aggregation.

  2007cited by this paper
• Plant Carbohydrate Scavenging through TonB-Dependent Receptors: A Feature Shared by Phytopathogenic and Aquatic Bacteria

  2007cited by this paper
• The biology of arabinogalactan proteins.

  2007cited by this paper
• Under the influence of the active deodorant ingredient 4-hydroxy-3-methoxybenzyl alcohol, the skin bacterium Corynebacterium jeikeium moderately responds with differential gene expression.

  2006cited by this paper
• Biosynthesis of plant cell wall polysaccharides - a complex process.

  2006cited by this paper
• TCDB: the Transporter Classification Database for membrane transport protein analyses and information

  2005cited by this paper
• Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris.

  2005cited by this paper
• Using process diagrams for the graphical representation of biological networks

  2005cited by this paper
• Molecular and Functional Characterization of a Unique Sucrose Hydrolase from Xanthomonas axonopodis pv. glycines

  2004cited by this paper
• Oligonucleotide microarrays in microbial diagnostics.

  2004cited by this paper
• GenDB--an open source genome annotation system for prokaryote genomes.

  2003cited by this paper
• Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression.

  2003cited by this paper
• Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source.

  2003cited by this paper
• EMMA: a platform for consistent storage and efficient analysis of microarray data.

  2003cited by this paper
• Enzyme-specific profiles for genome annotation: PRIAM.

  2003cited by this paper
• Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

  2002cited by this paper
• STATISTICAL METHODS FOR IDENTIFYING DIFFERENTIALLY EXPRESSED GENES IN REPLICATED cDNA MICROARRAY EXPERIMENTS

  2002cited by this paper
• Glycosidase mechanisms.

  2002cited by this paper
• Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation.

  2002cited by this paper
• Xanthomonas campestris pv. campestris secretes the endoglucanases ENGXCA and ENGXCB: construction of an endoglucanase-deficient mutant for industrial xanthan production

  2001cited by this paper
• Development and Validation of CorynebacteriumDNA Microarrays

  2001cited by this paper
• KEGG: Kyoto Encyclopedia of Genes and Genomes

  2000cited by this paper
• KEGG: Kyoto Encyclopedia of Genes and Genomes

  1999cited by this paper
• Novel and established applications of microbial polysaccharides.

  1998cited by this paper
• Exploring the metabolic and genetic control of gene expression on a genomic scale.

  1997cited by this paper
• Fimbrial biogenesis genes of Pseudomonas aeruginosa: pilW and pilX increase the similarity of type 4 fimbriae to the GSP protein‐secretion systems and pilY1 encodes a gonococcal PilC homologue

  1996cited by this paper
• Fructose phosphotransferase system of Xanthomonas campestris pv. campestris: characterization of the fruB gene.

  1995cited by this paper
• The roles of enteric bacterial sialidase, sialateO-acetyl esterase and glycosulfatase in the degradation of human colonic mucin

  1993cited by this paper
• The chromosomal virulence gene, chvE, of Agrobacterium tumefaciens is regulated by a LysR family member

  1993cited by this paper
• Fructose catabolism in Xanthomonas campestris pv. campestris. Sequence of the PTS operon, characterization of the fructose-specific enzymes.

  1991cited by this paper
• Identification of two fructose transport and phosphorylation pathways in Xanthomonas campestris pv. campestris

  1991cited by this paper
• Nucleotide sequence of the engXCA gene encoding the major endoglucanase of Xanthomonas campestris pv. campestris.

  1990cited by this paper
• Genetic and biochemical analysis of protein export from Xanthomonas campestris

  1989cited by this paper
• Cloning of two endoglucanase genes of Xanthomonas campestres pv. Campestris: analysis of the role of the major endoglucanase in pathogenesis

  1988cited by this paper
• Translational coupling during expression of the tryptophan operon of Escherichia coli.

  1980cited by this paper
• Purification and properties of an enzyme in human blood and rat liver microsomes catalyzing the formation and hydrolysis of gamma-lactones. II. Metal ion effects, kinetics, and equilibra.

  1966cited by this paper
• Purification and properties of an enzyme in human blood and rat liver microsomes catalyzing the formation and hydrolysis of gamma-lactones. I. Tissue localization, stoichiometry, specificity, distinction from esterase.

  1966cited by this paper

• Genome-Wide Association to Study the Host-Specificity Determinants of Xanthomonas perforans.

  2022cites this paper
• Regulatory associations between the metabolism of sulfur-containing amino acids and xanthan biosynthesis in Xanthomonas campestris pv. campestris B100.

  2019cites this paper
• Mechanistic insights into host adaptation, virulence and epidemiology of the phytopathogen Xanthomonas

  2019cites this paper
• A novel LuxR‐type solo of Sinorhizobium meliloti, NurR, is regulated by the chromosome replication coordinator, DnaA and activates quorum sensing

  2019cites this paper
• RNase E and RNase J are needed for S-adenosylmethionine homeostasis in Sinorhizobium meliloti.

  2017cites this paper
• Systems and synthetic biology perspective of the versatile plant-pathogenic and polysaccharide-producing bacterium Xanthomonas campestris.

  2017cites this paper
• AraC-like transcriptional activator CuxR binds c-di-GMP by a PilZ-like mechanism to regulate extracellular polysaccharide production

  2017cites this paper
• Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data.

  2017cites this paper
• Insights into the function and activity mechanism of stress-induced small non-coding RNAs and the endoribonuclease ybey in the legume symbiont sinorhizobium meliloti

  2017cites this paper
• A conserved &agr;‐proteobacterial small RNA contributes to osmoadaptation and symbiotic efficiency of rhizobia on legume roots

  2017cites this paper
• Genome wide transcription start sites analysis of Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan.

  2016cites this paper
• Sinorhizobium meliloti YbeY is an endoribonuclease with unprecedented catalytic features, acting as silencing enzyme in riboregulation

  2016cites this paper
• Spatiotemporal choreography of chromosome and megaplasmids in the Sinorhizobium meliloti cell cycle

  2016cites this paper
• Applying DNA affinity chromatography to specifically screen for sucrose-related DNA-binding transcriptional regulators of Xanthomonas campestris.

  2016cites this paper
• Systems Metabolic Engineering of Escherichia coli

  2016cites this paper
• Cyclic mononucleotide- and Clr-dependent gene regulation in Sinorhizobium meliloti.

  2016cites this paper
• A straightforward and reliable method for bacterial in planta transcriptomics: application to the Dickeya dadantii/Arabidopsis thaliana pathosystem.

  2015cites this paper
• Synthetic secondary chromosomes in Escherichia coli based on the replication origin of chromosome II in Vibrio cholerae.

  2015cites this paper
• Bacterial exopolysaccharides: biosynthesis pathways and engineering strategies

  2015influential citation
• A Stress-Induced Small RNA Modulates Alpha-Rhizobial Cell Cycle Progression

  2015cites this paper
• Characterization of the pyrophosphate-dependent 6-phosphofructokinase from Xanthomonas campestris pv. campestris.

  2014cites this paper
• Transcriptional reprogramming and phenotypical changes associated with growth of Xanthomonas campestris pv. campestris in cabbage xylem sap.

  2014cites this paper
• Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100.

  2013cites this paper
• Metabolic engineering of microorganisms for the overproduction of fatty acids

  2013cites this paper
• The DivJ, CbrA and PleC system controls DivK phosphorylation and symbiosis in Sinorhizobium meliloti

  2013influential citation
• Small RNA sX13: A Multifaceted Regulator of Virulence in the Plant Pathogen Xanthomonas

  2013cites this paper
• Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

  2012cites this paper
• Analysis of the interaction of Clavibacter michiganensis subsp. michiganensis with its host plant tomato by genome-wide expression profiling.

  2012cites this paper
• Caractérisation et conservation d'un nouveau système CUT associé à l'utilisation du xylane chez Xanthomonas campestris pv. campestris : implications en écologie microbienne

  2011cites this paper
• Biochemical Characterization of Sinorhizobium meliloti Mutants Reveals Gene Products Involved in the Biosynthesis of the Unusual Lipid A Very Long-chain Fatty Acid*

  2011cites this paper
• Integrated Rotating Fibrous Bed Bioreactor-Ultrafiltration Process for Xanthan Gum Production from Whey Lactose

  2011cites this paper
• Insights into the genome of the xanthan-producing phytopathogen Xanthomonas arboricola pv. pruni 109 by comparative genomic hybridization.

  2011influential citation
• ppGpp in Sinorhizobium meliloti: biosynthesis in response to sudden nutritional downshifts and modulation of the transcriptome

  2011cites this paper
• A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti

  2010cites this paper
• Improving Microbial Robustness Using Systems Biology

  2010cites this paper
• Molecular characterization of a novel quorum sensing system of the diazotrophic grass endophyte Azoarcus sp. strain BH72

  2010influential citation
• Insights into the Extracytoplasmic Stress Response of Xanthomonas campestris pv. campestris: Role and Regulation of σE-Dependent Activity

  2010cites this paper
• EMMA 2 – A MAGE-compliant system for the collaborative analysis and integration of microarray data

  2009cites this paper
• Analyse der Genregulation des Kohlenhydratstoffwechsels in Xanthomonas campestris pv. campestris

  2009cites this paper
• Prediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011

  2008cites this paper
• Towards systems metabolic engineering of microorganisms for amino acid production.

  2008cites this paper
• Serodiagnosis of onion soft rot bacterium (Erwinia carotovora var. carotovora) from onion seeds

  2007cites this paper
• BMC Genomics

  year unknowninfluential citation
• Open Access Research Article

  year unknowncites this paper