Admixture mapping of quantitative traits in Populus hybrid zones: power and limitations

No abstract is available for this paper.

• Publication year

  2013

• Venue

  Heredity

• Publication date

  2013-07-17

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1038/hdy.2013.69PMID 23860234PMCID PMC3833683
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• R: A language and environment for statistical computing.

  2014cited by this paper
• GENOME DIVERGENCE AND THE GENETIC ARCHITECTURE OF BARRIERS TO GENE FLOW BETWEEN LYCAEIDES IDAS AND L. MELISSA

  2013cited by this paper
• Genomic scan for single nucleotide polymorphisms reveals patterns of divergence and gene flow between ecologically divergent species

  2013cited by this paper
• Recombinant hybrids retain heterozygosity at many loci: new insights into the genomics of reproductive isolation in Populus

  2012cited by this paper
• Adaptation from standing genetic variation and from mutation

  2012cited by this paper
• Admixture mapping of male nuptial colour and body shape in a recently formed hybrid population of threespine stickleback

  2012influential reference
• Multimodel inference in ecology and evolution: challenges and solutions

  2011cited by this paper
• Comparative genome mapping among Populus adenopoda, P. alba, P. deltoides, P. euramericana and P. trichocarpa.

  2011cited by this paper
• Genomic Admixture Analysis in European Populus spp. Reveals Unexpected Patterns of Reproductive Isolation and Mating

  2010cited by this paper
• Admixture mapping comes of age.

  2010cited by this paper
• Admixture facilitates adaptation from standing variation in the European aspen (Populus tremula L.), a widespread forest tree

  2010cited by this paper
• Understanding the onset of hybrid speciation.

  2010cited by this paper
• The genetics of inbreeding depression

  2009cited by this paper
• A Model Selection Approach for the Identification of Quantitative Trait Loci in Experimental Crosses, Allowing Epistasis

  2009cited by this paper
• Genetic linkage mapping in aspen (Populus tremula L. and Populus tremuloides Michx.)

  2009cited by this paper
• The use of digital image-based morphometrics to study the phenotypic mosaic in taxa with porous genomes

  2009cited by this paper
• Testing natural selection.

  2009cited by this paper
• The genic view of plant speciation: recent progress and emerging questions

  2008cited by this paper
• Admixture as the basis for genetic mapping.

  2008cited by this paper
• quantiNemo: an individual-based program to simulate quantitative traits with explicit genetic architecture in a dynamic metapopulation

  2008influential reference
• Adaptation from standing genetic variation.

  2008cited by this paper
• Inference of population structure using multilocus genotype data: dominant markers and null alleles

  2007cited by this paper
• Admixture in European Populus hybrid zones makes feasible the mapping of loci that contribute to reproductive isolation and trait differences

  2007cited by this paper
• Admixture in European Populus hybrid zones makes feasible the mapping of loci that contribute to reproductive isolation and trait differences

  2007cited by this paper
• The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

  2006cited by this paper
• Elucidating genomic regions determining enhanced leaf growth and delayed senescence in elevated CO2.

  2006cited by this paper
• Why do we still use stepwise modelling in ecology and behaviour?

  2006cited by this paper
• Ecological divergence exhibits consistently positive associations with reproductive isolation across disparate taxa.

  2006cited by this paper
• Some Evolutionary Consequences of Being a Tree

  2006cited by this paper
• Prospects for admixture mapping of complex traits.

  2005cited by this paper
• Genetics of Species Differences in the Wild Annual Sunflowers, Helianthus annuus and H. petiolaris

  2005cited by this paper
• Admixture mapping for hypertension loci with genome-scan markers

  2005cited by this paper
• Barrier to gene flow between two ecologically divergent Populus species, P. alba (white poplar) and P. tremula (European aspen): the role of ecology and life history in gene introgression

  2005cited by this paper
• Quantitative trait locus analyses and the study of evolutionary process

  2004cited by this paper
• Design and analysis of admixture mapping studies.

  2004cited by this paper
• Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.

  2003influential reference
• Control of confounding of genetic associations in stratified populations.

  2003influential reference
• Multifactorial genetics: Understanding quantitative genetic variation

  2002cited by this paper
• QTL analysis in plants.

  2002cited by this paper
• Genetic Mapping in Hybrid Zones

  2002cited by this paper
• The genetics of species differences.

  2001influential reference
• The genetic architecture of quantitative traits.

  2001cited by this paper
• The genetics of species differences.

  2001cited by this paper
• Genetic architecture of a morphological shape difference between two Drosophila species.

  2000cited by this paper
• Inference of population structure using multilocus genotype data.

  2000influential reference
• Hybrid zones and the genetic architecture of a barrier to gene flow between two sunflower species.

  1999cited by this paper
• Identifying the loci responsible for natural variation in fruit size and shape in tomato

  1999cited by this paper
• Transgressive segregation, adaptation and speciation

  1999cited by this paper
• Mapping genes that underlie ethnic differences in disease risk: methods for detecting linkage in admixed populations, by conditioning on parental admixture.

  1998cited by this paper
• Quantitative trait loci affecting differences in floral morphology between two species of monkeyflower (Mimulus).

  1998cited by this paper
• QTL analysis in plants; where are we now?

  1998cited by this paper
• Testing natural selection vs. genetic drift in phenotypic evolution using quantitative trait locus data.

  1998cited by this paper
• Genetics and Analysis of Quantitative Traits

  1996cited by this paper
• Empirical threshold values for quantitative trait mapping.

  1994cited by this paper
• Linkage disequilibrium in admixed populations: applications in gene mapping.

  1994cited by this paper
• Mapping polygenes.

  1993cited by this paper
• Admixture as a tool for finding linked genes and detecting that difference from allelic association between loci.

  1988cited by this paper
• Estimating the Dimension of a Model

  1978cited by this paper
• INFORMATION THEORY AS AN EXTENSION OF THE MAXIMUM LIKELIHOOD

  1973cited by this paper

• Joint test of historical vs. contemporary biogeography supports abundant center hypothesis shaping spatial patterns of self-fertilization

  2025cites this paper
• The genomic landscape of metallic color variation in ground beetles

  2025cites this paper
• Common‐garden study of introgression at loci associated with traits adaptive to coastal environment from Quercus dentata into Quercus mongolica var. crispula

  2024cites this paper
• Environment predicts the maintenance of reproductive isolation in a mosaic hybrid zone of rubber rabbitbrush

  2023cites this paper
• One hundred years into the study of ecotypes, new advances are being made through large-scale field experiments in perennial plant systems.

  2022cites this paper
• The genomic consequences of hybridization

  2021cites this paper
• Adaptive trait syndromes along multiple economic spectra define cold and warm adapted ecotypes in a widely distributed foundation tree species

  2020cites this paper
• Leaf shape in Populus tremula is a complex, omnigenic trait

  2020cites this paper
• The genetic consequences of hybridization.

  2020cites this paper
• Natural Selection For Disease Resistance In Hybrid Poplars Targets Stomatal Patterning Traits And Regulatory Genes.

  2019cites this paper
• A clue on bee glue: New insight into the sources and factors driving resin intake in honeybees (Apis mellifera)

  2019cites this paper
• Genomics of divergence and hybridisation in the genus Antirrhinum L.

  2019cites this paper
• Population Genomics of Speciation and Admixture

  2018cites this paper
• Adaptive introgression: a plant perspective

  2018cites this paper
• Natural hybridisation among Quercus glabrescens, Q. rugosa and Q. obtusata (Fagaceae): Microsatellites and secondary metabolites markers.

  2018cites this paper
• Clines on the seashore: The genomic architecture underlying rapid divergence in the face of gene flow

  2018cites this paper
• Admixture mapping in interspecific Populus hybrids identifies classes of genomic architectures for phytochemical, morphological and growth traits

  2018cites this paper
• Spatially combining wood production and recreation with biodiversity conservation

  2017influential citation
• Climate warming and atmospheric deposition affect seed viability of common juniper (Juniperus communis) via their impact on the nutrient status of the plant

  2017influential citation
• Loter: A Software Package to Infer Local Ancestry for a Wide Range of Species

  2017cites this paper
• History rather than hybridization determines population structure and adaptation in Populus balsamifera

  2017cites this paper
• Fine scale mapping of genomic introgressions within the Drosophila yakuba clade

  2017cites this paper
• Analysis of Population Genomic Data from Hybrid Zones

  2017cites this paper
• Modélisation du déséquilibre de liaison en génomique des populations par méthodes d'optimisation

  2017cites this paper
• Genetic Diversity, Population Structure and Ancestral Origin of Australian Wheat

  2017cites this paper
• Selection against recombinant hybrids maintains reproductive isolation in hybridizing Populus species despite F1 fertility and recurrent gene flow

  2016cites this paper
• Genomic and functional approaches reveal a case of adaptive introgression from Populus balsamifera (balsam poplar) in P. trichocarpa (black cottonwood)

  2016cites this paper
• Genetic structure of Populus hybrid zone along the Irtysh River provides insight into plastid-nuclear incompatibility

  2016cites this paper
• Effects of Hybridization and Evolutionary Constraints on Secondary Metabolites: The Genetic Architecture of Phenylpropanoids in European Populus Species

  2015influential citation
• Selection on outlier loci and their association with adaptive phenotypes in Littorina saxatilis contact zones

  2015cites this paper
• Genome-wide patterns of differentiation and spatially varying selection between postglacial recolonization lineages of Populus alba (Salicaceae), a widespread forest tree.

  2015cites this paper
• Genomic variation across landscapes: insights and applications.

  2015cites this paper
• The role of homoploid hybridization in evolution: a century of studies synthesizing genetics and ecology.

  2014cites this paper
• Population Genomics of Marine Fishes: Next-Generation Prospects and Challenges

  2014cites this paper
• Advances in Ecological Speciation: an integrative approach

  2014cites this paper
• Genomics and the origin of species

  2014cites this paper
• Evolutionary genetics and genomics of flower colour loci in an Antirrhinum hybrid zone

  2014cites this paper
• Challenges and prospects in genome‐wide quantitative trait loci mapping of standing genetic variation in natural populations

  2014cites this paper
• IDENTIFICATION OF GENES UNDER DIVERGENT SELECTION IN INTERFERTILE, BUT ECOLOGICALLY DIVERGENT OAKS

  2014cites this paper
• Strategies to Identify Adaptive Genes in Hybridizing Trees like Oaks and Poplars

  2014cites this paper
• Analyses of genetic ancestry enable key insights for molecular ecology

  2013cites this paper
• Integrating the 'genomic mosaic' view of species into studies of biotic interactions: a comment on Bernhardsson et al. ().

  2013cites this paper