Evolutionary rewiring: a modified prokaryotic gene-regulatory pathway in chloroplasts

No abstract is available for this paper.

• Publication year

  2013

• Venue

  Philosophical Transactions of the Royal Society B: Biological Sciences

• Publication date

  2013-07-19

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1098/rstb.2012.0260PMID 23754813PMCID PMC3685462
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Biochemical characterisation of the cyanobacterial Hik2-Rre1 two-component regulatory system

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• Oxidation-reduction signalling components in regulatory pathways of state transitions and photosystem stoichiometry adjustment in chloroplasts.

  2012cited by this paper
• Signal integration by chloroplast phosphorylation networks: an update

  2012cited by this paper
• Phylogenetic and functional features of the plastid transcription kinase cpCK2 from Arabidopsis signify a role of cysteinyl SH‐groups in regulatory phosphorylation of plastid sigma factors

  2012cited by this paper
• Identification of a Photosystem II Phosphatase Involved in Light Acclimation in Arabidopsis[W]

  2012cited by this paper
• Genomes of Stigonematalean Cyanobacteria (Subsection V) and the Evolution of Oxygenic Photosynthesis from Prokaryotes to Plastids

  2012cited by this paper
• Phosphorylation in the plant circadian system.

  2012cited by this paper
• Overexpression of Tagged Chloroplast Sensor Kinase Confirms its Stromal Localization and Reveals its Possible Involvement in Plant Photomorphogenesis

  2012cited by this paper
• Faculty Opinions recommendation of Identification of a photosystem II phosphatase involved in light acclimation in Arabidopsis.

  2012cited by this paper
• Steady-state kinetic mechanism of the proline:ubiquinone oxidoreductase activity of proline utilization A (PutA) from Escherichia coli.

  2011cited by this paper
• Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system.

  2011cited by this paper
• A structural phylogenetic map for chloroplast photosynthesis.

  2011cited by this paper
• A chloroplast envelope-bound PHD transcription factor mediates chloroplast signals to the nucleus.

  2011cited by this paper
• Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å

  2011cited by this paper
• Function of plastid sigma factors in higher plants: regulation of gene expression or just preservation of constitutive transcription?

  2011cited by this paper
• The transcription machineries of plant mitochondria and chloroplasts: Composition, function, and regulation.

  2011cited by this paper
• Lack of conservation of bacterial type promoters in plastids of Streptophyta

  2010cited by this paper
• AtSIG6, a plastid sigma factor from Arabidopsis, reveals functional impact of cpCK2 phosphorylation

  2010cited by this paper
• Two-component signal transduction.

  2010cited by this paper
• Sigma factor phosphorylation in the photosynthetic control of photosystem stoichiometry

  2010cited by this paper
• Transcriptional Control of Photosynthesis Genes: The Evolutionarily Conserved Regulatory Mechanism in Plastid Genome Function

  2010cited by this paper
• The KaiA protein of the cyanobacterial circadian oscillator is modulated by a redox-active cofactor

  2010cited by this paper
• Role and regulation of plastid sigma factors and their functional interactors during chloroplast transcription - recent lessons from Arabidopsis thaliana.

  2010cited by this paper
• The role of phosphorylation in redox regulation of photosynthesis genes psaA and psbA during photosynthetic acclimation of mustard.

  2009cited by this paper
• Arabidopsis STN7 Kinase Provides a Link between Short- and Long-Term Photosynthetic Acclimation[W]

  2009cited by this paper
• Dating the cyanobacterial ancestor of the chloroplast

  2009cited by this paper
• Chloroplast two-component systems: evolution of the link between photosynthesis and gene expression

  2009cited by this paper
• Structure Determination and Improved Model of Plant Photosystem I*

  2009cited by this paper
• Transients in chloroplast gene transcription.

  2008cited by this paper
• The ancestral symbiont sensor kinase CSK links photosynthesis with gene expression in chloroplasts

  2008cited by this paper
• Chloroplast His-to-Asp signal transduction: a potential mechanism for plastid gene regulation in Heterosigma akashiwo (Raphidophyceae)

  2007cited by this paper
• The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions

  2007cited by this paper
• A Large-scale Protein–protein Interaction Analysis in Synechocystis sp. PCC6803

  2007cited by this paper
• Plant sigma factors and their role in plastid transcription

  2007cited by this paper
• The cyanobacterial principal σ factor region 1.1 is involved in DNA‐binding in the free form and in transcription activity as holoenzyme

  2006cited by this paper
• Retrograde Plastid Redox Signals in the Expression of Nuclear Genes for Chloroplast Proteins of Arabidopsis thaliana*

  2005cited by this paper
• Blue light-induced transcription of plastid-encoded psbD gene is mediated by a nuclear-encoded transcription initiation factor, AtSig5.

  2004cited by this paper
• Alternative quinone substrates and inhibitors of human electron-transfer flavoprotein-ubiquinone oxidoreductase.

  2004cited by this paper
• Two independent light signals cooperate in the activation of the plastid psbD blue light‐responsive promoter in Arabidopsis

  2004cited by this paper
• The sigma70 family of sigma factors.

  2003cited by this paper
• Redox Regulation of Chloroplast Transcription

  2003cited by this paper
• The σ70 family of sigma factors

  2003cited by this paper
• The function of genomes in bioenergetic organelles.

  2003cited by this paper
• Dual roles of photosynthetic electron transport in photosystem I biogenesis: light induction of mRNAs and chromatic regulation at post-mRNA level.

  2002cited by this paper
• Structural Basis of Transcription Initiation: An RNA Polymerase Holoenzyme-DNA Complex

  2002cited by this paper
• Dynamic Regulation of Chloroplast Transcription’

  2002cited by this paper
• The plastid transcription kinase from mustard (Sinapis alba L.). A nuclear-encoded CK2-type chloroplast enzyme with redox-sensitive function.

  2002cited by this paper
• The abundant retinal protein of the Chlamydomonas eye is not the photoreceptor for phototaxis and photophobic responses.

  2001cited by this paper
• Phytochrome A mediates blue light and UV-A-dependent chloroplast gene transcription in green leaves.

  2001cited by this paper
• Domain 1.1 of the sigma(70) subunit of Escherichia coli RNA polymerase modulates the formation of stable polymerase/promoter complexes.

  2001cited by this paper
• Plastid transcription: a menage à trois?

  2001cited by this paper
• Analysis of barley chloroplast psbD light-responsive promoter elements in transplastomic tobacco

  2001cited by this paper
• Chloroplast transcription at different light intensities. Glutathione-mediated phosphorylation of the major RNA polymerase involved in redox-regulated organellar gene expression.

  2001cited by this paper
• Bangiomorpha pubescens n. gen., n. sp.: implications for the evolution of sex, multicellularity, and the Mesoproterozoic/Neoproterozoic radiation of eukaryotes

  2000cited by this paper
• Two-component signal transduction.

  2000cited by this paper
• A Redox-Responsive Regulator of Photosynthesis Gene Expression in the Cyanobacterium Synechocystis sp. Strain PCC 6803

  2000cited by this paper
• Photosynthetic electron flow regulates transcription of the psaB gene in pea (Pisum sativum L.) chloroplasts through the redox state of the plastoquinone pool.

  2000cited by this paper
• Why have organelles retained genomes?

  1999cited by this paper
• Photosynthetic control of chloroplast gene expression

  1999cited by this paper
• PTK, the chloroplast RNA polymerase-associated protein kinase from mustard (Sinapis alba), mediates redox control of plastid in vitro transcription§

  1999cited by this paper
• Direct Transcriptional Control of the Chloroplast Genes psbA and psaAB Adjusts Photosynthesis to Light Energy Distribution in Plants

  1999cited by this paper
• Transcription and the architecture of promoters in chloroplasts.

  1999cited by this paper
• Coordination of nuclear and chloroplast gene expression in plant cells.

  1998cited by this paper
• Chromatic Regulation in Chlamydomonas reinhardtii: Time Course of Photosystem Stoichiometry Adjustment Following a Shift in Growth Light Quality

  1997cited by this paper
• Changes in photosystem stoichiometry in response to environmental conditions for cell growth observed with the cyanophyte Synechocystis PCC 6714.

  1997cited by this paper
• Light intensity regulation of cab gene transcription is signaled by the redox state of the plastoquinone pool.

  1995cited by this paper
• Separate Photosensory Pathways Co-Regulate Blue Light/Ultraviolet-A-Activated psbD-psbC Transcription and Light-Induced D2 and CP43 Degradation in Barley (Hordeum vulgare) Chloroplasts

  1994cited by this paper
• Redox control of transcription: sensors, response regulators, activators and repressers

  1993cited by this paper
• Control mechanisms of plastid gene expression

  1993cited by this paper
• Control of gene expression by redox potential and the requirement for chloroplast and mitochondrial genomes.

  1993cited by this paper
• Dynamic Regulation of Chloroplast Transcription

  1993cited by this paper
• Light‐induced switch in barley psbD‐psbC promoter utilization: a novel mechanism regulating chloroplast gene expression.

  1990cited by this paper
• Adjustments of photosystem stoichiometry in chloroplasts improve the quantum efficiency of photosynthesis.

  1990cited by this paper
• Analysis of E. coli promoter sequences.

  1987cited by this paper
• Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA

  1986cited by this paper
• The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression

  1986cited by this paper
• Evolution and tinkering.

  1977cited by this paper
• Function of the Two Cytochrome Components in Chloroplasts: A Working Hypothesis

  1960cited by this paper

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  2025cites this paper
• Why a chloroplast needs its own genome tethered to the thylakoid membrane -- Co-location for Redox Regulation

  2025cites this paper
• Thiol redox switches regulate the oligomeric state of cyanobacterial Rre1, RpaA and RpaB response regulators

  2022cites this paper
• Transcription initiation as a control point in plastid gene expression.

  2021cites this paper
• An evolutionarily conserved iron-sulfur cluster underlies redox sensory function of the Chloroplast Sensor Kinase

  2020cites this paper
• Sigma factor 1 in chloroplast gene transcription and photosynthetic light acclimation

  2019cites this paper
• On the influence of the protein kinases pCKII, STN7 and STN8 on chloroplast phosphorylation networks in Arabidopsis thaliana

  2019cites this paper
• Diversity and Evolution of Sensor Histidine Kinases in Eukaryotes

  2018cites this paper
• Post-transcriptional regulation of the oxidative stress response in plants

  2018cites this paper
• Translating photosynthesis

  2018cites this paper
• Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

  2018cites this paper
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  2018cites this paper
• Post‐transcriptional regulation of the oxidative stress response in plants

  2018cites this paper
• An Algal Greening of Land.

  2018cites this paper
• The CoRR hypothesis for genes in organelles.

  2017cites this paper
• Cryptochrome 2 extensively regulates transcription of the chloroplast genome in tomato

  2017cites this paper
• Oligomeric states in sodium ion-dependent regulation of cyanobacterial histidine kinase-2

  2017cites this paper
• Probing the nucleotide-binding activity of a redox sensor: two-component regulatory control in chloroplasts

  2016cites this paper
• Why Have Organelles Retained Genomes?

  2016cites this paper
• Plastid structure and genomics

  2016cites this paper
• The chloroplast gene-expression system

  2016cites this paper
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  2016cites this paper
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  2016cites this paper
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  2016cites this paper
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  2015cites this paper
• Mitochondrial genomes are retained by selective constraints on protein targeting

  2015cites this paper
• Chloroplast RNA polymerases: Role in chloroplast biogenesis.

  2015cites this paper
• Global coordination in adaptation to gene rewiring

  2015cites this paper
• Evolutionary Convergence of Cell-Specific Gene Expression in Independent Lineages of C4 Grasses1[W][OPEN]

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  2014cites this paper
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• gene content in plastid and mitochondrial genomes

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• Mitochondrial genome function and maternal inheritance.

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• Dissection of CURT1 complex functions in thylakoid ultrastructure formation and photosynthesis

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