Unifying non-Markovian dynamics and agent heterogeneity in scalable stochastic networks.

No abstract is available for this paper.

• Publication year

  2026

• Venue

  Nature Communications

• Publication date

  2026-03-02

• Fields of study

  Biology, Physics, Computer Science, Mathematics, Medicine

• Identifiers
  DOI 10.1038/s41467-026-69817-yPMID 41771859
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Generalizing egocentric temporal neighborhoods to probe for spatial correlations in temporal networks and infer their topology

  2025cited by this paper
• Epihiper—A high performance computational modeling framework to support epidemic science

  2024cited by this paper
• Fast and exact stochastic simulations of epidemics on static and temporal networks

  2024cited by this paper
• Higher-order non-Markovian social contagions in simplicial complexes

  2024cited by this paper
• Strategy evolution on higher-order networks

  2024cited by this paper
• Non-Markovian Epidemic Spreading on Temporal  Networks

  2023cited by this paper
• Understanding repertoire sequencing data through a multiscale computational model of the germinal center

  2023cited by this paper
• Flow of temporal network properties under local aggregation and time shuffling: a tool for characterizing, comparing and classifying temporal networks

  2023cited by this paper
• Combining Sensors and Surveys to Study Social Interactions: A Case of Four Science Conferences

  2023cited by this paper
• The temporal dynamics of group interactions in higher-order social networks

  2023cited by this paper
• Stochastic modeling of a gene regulatory network driving B cell development in germinal centers

  2023cited by this paper
• DelaySSAToolkit.jl: stochastic simulation of reaction systems with time delays in Julia

  2022cited by this paper
• Probabilistic activity driven model of temporal simplicial networks and its application on higher-order dynamics.

  2022cited by this paper
• Dynamics on higher-order networks: a review

  2022cited by this paper
• Heterogeneity matters: Contact structure and individual variation shape epidemic dynamics

  2021cited by this paper
• Computational Model Reveals a Stochastic Mechanism behind Germinal Center Clonal Bursts

  2020cited by this paper
• Basic mechanisms and kinetics of pause-interspersed transcript elongation

  2020cited by this paper
• Agent-based modeling reveals benefits of heterogeneous and stochastic cell populations during cGAS-mediated IFNβ production

  2020cited by this paper
• Dynamics of cascades on burstiness-controlled temporal networks

  2020cited by this paper
• Analytical distributions for detailed models of stochastic gene expression in eukaryotic cells

  2020cited by this paper
• Forecasting the seasonal pollen index by using a hidden Markov model combining meteorological and biological factors.

  2019cited by this paper
• Markovian approaches to modeling intracellular reaction processes with molecular memory

  2019cited by this paper
• A Probabilistic Model of the Germinal Center Reaction

  2019cited by this paper
• Effects of memory on spreading processes in non-Markovian temporal networks

  2018cited by this paper
• Efficient sampling of spreading processes on complex networks using a composition and rejection algorithm

  2018cited by this paper
• The physics of brain network structure, function and control

  2018cited by this paper
• Inferring gene regulatory networks from single-cell data: a mechanistic approach

  2017cited by this paper
• Stem Cell Differentiation as a Non-Markov Stochastic Process

  2017cited by this paper
• GEMFsim: A stochastic simulator for the generalized epidemic modeling framework

  2016cited by this paper
• Burstiness and tie activation strategies in time-varying social networks

  2016cited by this paper
• Germinal Center B Cell Dynamics.

  2016cited by this paper
• Visualizing antibody affinity maturation in germinal centers

  2016cited by this paper
• Hidden Markov Model for Stock Selection

  2015cited by this paper
• Temporal Gillespie Algorithm: Fast Simulation of Contagion Processes on Time-Varying Networks

  2015cited by this paper
• Use of the harmonic mean to the determination of dissociation constants of stereoisomeric mixtures of biologically active compounds

  2014cited by this paper
• Efficient rejection-based simulation of biochemical reactions with stochastic noise and delays.

  2014cited by this paper
• Comparing Stochastic Differential Equations and Agent-Based Modelling and Simulation for Early-Stage Cancer

  2014cited by this paper
• Causality-driven slow-down and speed-up of diffusion in non-Markovian temporal networks

  2013cited by this paper
• Activity driven modeling of time varying networks

  2012cited by this paper
• Universal features of correlated bursty behaviour

  2011cited by this paper
• Fluid limit theorems for stochastic hybrid systems with application to neuron models

  2010cited by this paper
• Effects of Transcriptional Pausing on Gene Expression Dynamics

  2010cited by this paper
• EpiFast: a fast algorithm for large scale realistic epidemic simulations on distributed memory systems

  2009cited by this paper
• A modified next reaction method for simulating chemical systems with time dependent propensities and delays.

  2007cited by this paper
• Modularity and community structure in networks.

  2006cited by this paper
• Oscillatory Regulation of Hes1: Discrete Stochastic Delay Modelling and Simulation

  2006cited by this paper
• Delay-induced stochastic oscillations in gene regulation.

  2005cited by this paper
• The implications of network structure for epidemic dynamics.

  2005cited by this paper
• Stochastic processes with applications to finance

  2002cited by this paper
• Precision and functional specificity in mRNA decay

  2002cited by this paper
• Oscillatory Expression of the bHLH Factor Hes1 Regulated by a Negative Feedback Loop

  2002cited by this paper
• Efficient Exact Stochastic Simulation of Chemical Systems with Many Species and Many Channels

  2000cited by this paper
• Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells.

  1998cited by this paper
• Collective dynamics of ‘small-world’ networks

  1998cited by this paper
• Exact Stochastic Simulation of Coupled Chemical Reactions

  1977cited by this paper
• A General Method for Numerically Simulating the Stochastic Time Evolution of Coupled Chemical Reactions

  1976cited by this paper

• No citing papers are available for this paper.