Role of alternative pre-mRNA splicing in temperature signaling.

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Current opinion in plant biology

• Publication date

  2015-10-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1016/j.pbi.2015.06.016PMID 26190743
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• MAF2 Is Regulated by Temperature-Dependent Splicing and Represses Flowering at Low Temperatures in Parallel with FLM

  2015cited by this paper
• Peripheral thermosensation in mammals

  2014cited by this paper
• Alternative splicing and nonsense-mediated decay of circadian clock genes under environmental stress conditions in Arabidopsis

  2014cited by this paper
• Functional Consequences of Splicing of the Antisense Transcript COOLAIR on FLC Transcription

  2014cited by this paper
• Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana

  2013cited by this paper
• Adaptation of molecular circadian clockwork to environmental changes: a role for alternative splicing and miRNAs

  2013cited by this paper
• Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana

  2013cited by this paper
• Global approaches for telling time: omics and the Arabidopsis circadian clock.

  2013cited by this paper
• Regulation of Temperature-Responsive Flowering by MADS-Box Transcription Factor Repressors

  2013cited by this paper
• R-Loop Stabilization Represses Antisense Transcription at the Arabidopsis FLC Locus

  2013cited by this paper
• Accurate timekeeping is controlled by a cycling activator in Arabidopsis

  2013cited by this paper
• Alternative Splicing at the Intersection of Biological Timing, Development, and Stress Responses[OPEN]

  2013cited by this paper
• Temperature-dependent regulation of flowering by antagonistic FLM variants

  2013cited by this paper
• Alternative splicing: a pivotal step between eukaryotic transcription and translation

  2013cited by this paper
• Thermoplasticity in the plant circadian clock

  2012cited by this paper
• A Self-Regulatory Circuit of CIRCADIAN CLOCK-ASSOCIATED1 Underlies the Circadian Clock Regulation of Temperature Responses in Arabidopsis[W]

  2012cited by this paper
• CCA1 alternative splicing as a way of linking the circadian clock to temperature response in Arabidopsis

  2012cited by this paper
• Alternative Splicing Mediates Responses of the Arabidopsis Circadian Clock to Temperature Changes[W]

  2012cited by this paper
• Functional analysis of splice variant expression of MADS AFFECTING FLOWERING 2 of Arabidopsis thaliana

  2012cited by this paper
• SKIP Is a Component of the Spliceosome Linking Alternative Splicing and the Circadian Clock in Arabidopsis[W]

  2012cited by this paper
• Alternative splicing: enhancing ability to cope with stress via transcriptome plasticity.

  2012cited by this paper
• Arabidopsis RNA-binding Protein FCA Regulates MicroRNA172 Processing in Thermosensory Flowering*

  2012cited by this paper
• Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis

  2012cited by this paper
• Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation.

  2011cited by this paper
• Two splice variants of the IDD14 transcription factor competitively form nonfunctional heterodimers which may regulate starch metabolism.

  2011cited by this paper
• Molecular Mechanisms Underlying the Arabidopsis Circadian Clock

  2011cited by this paper
• Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis

  2011cited by this paper
• The genetics of plant clocks.

  2011cited by this paper
• Arginine methylation mediated by the Arabidopsis homolog of PRMT5 is essential for proper pre-mRNA splicing

  2010cited by this paper
• The Role of the Arabidopsis Morning Loop Components CCA1, LHY, PRR7, and PRR9 in Temperature Compensation[W]

  2010cited by this paper
• The spen family protein FPA controls alternative cleavage and polyadenylation of RNA.

  2010cited by this paper
• Targeted 3′ Processing of Antisense Transcripts Triggers Arabidopsis FLC Chromatin Silencing

  2010cited by this paper
• The Developmental Transcriptome of Drosophila melanogaster

  2010cited by this paper
• A methyl transferase links the circadian clock to the regulation of alternative splicing

  2010cited by this paper
• Natural Diversity in Flowering Responses of Arabidopsis thaliana Caused by Variation in a Tandem Gene Array

  2010cited by this paper
• Genome-wide mapping of alternative splicing in Arabidopsis thaliana.

  2010cited by this paper
• The circadian system in higher plants.

  2009cited by this paper
• Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target

  2009cited by this paper
• Vernalization: winter and the timing of flowering in plants.

  2009cited by this paper
• Pre-mRNA processing reaches back to transcription and ahead to translation.

  2009cited by this paper
• Splicing regulation: from a parts list of regulatory elements to an integrated splicing code.

  2008cited by this paper
• Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

  2008cited by this paper
• Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses.

  2007cited by this paper
• Differential expression of alternatively spliced mRNAs of Arabidopsis SR protein homologs, atSR30 and atSR45a, in response to environmental stress.

  2007cited by this paper
• Pre-mRNA Secondary Structures Influence Exon Recognition

  2007cited by this paper
• Alternative splicing of pre-messenger RNAs in plants in the genomic era.

  2007cited by this paper
• STABILIZED1, a Stress-Upregulated Nuclear Protein, Is Required for Pre-mRNA Splicing, mRNA Turnover, and Stress Tolerance in Arabidopsis[W]

  2006cited by this paper
• Protein Composition and Electron Microscopy Structure of Affinity-Purified Human Spliceosomal B Complexes Isolated under Physiological Conditions

  2006cited by this paper
• The Molecular Basis of Temperature Compensation in the Arabidopsis Circadian Clock[W]

  2006cited by this paper
• Intron retention is a major phenomenon in alternative splicing in Arabidopsis.

  2004cited by this paper
• Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences.

  2004cited by this paper
• The Arabidopsis thaliana Clock

  2004cited by this paper
• Analysis of the Arabidopsis MADS AFFECTING FLOWERING Gene Family: MAF2 Prevents Vernalization by Short Periods of Cold Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.009506. Online version contains Web-only data.

  2003cited by this paper
• Genetic interactions between FLM and other flowering-time genes in Arabidopsis thaliana

  2003cited by this paper
• Functional Significance of the Alternative Transcript Processing of the Arabidopsis Floral Promoter FCA Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010456.

  2002cited by this paper
• Identification of a MADS-box gene, FLOWERING LOCUS M, that represses flowering.

  2001cited by this paper
• The Arabidopsis splicing factor SR1 is regulated by alternative splicing

  2000cited by this paper
• FCA, a gene controlling flowering time in Arabidopsis, encodes a protein containing RNA-binding domains.

  1997cited by this paper
• The use of angiotensin II as a potential method of targeting cytotoxic microspheres in patients with intrahepatic tumour.

  1991cited by this paper

• Structural and functional characterisation and regulatory mechanisms of SWI/SNF and RSC chromatin remodelling complexes in fungi

  2025cites this paper
• Functional study of RNA alternative splicing in zebrafish adaptation to low temperature.

  2025cites this paper
• Integrative Multi-Omics Characterization and Structural Insights into the Poorly Annotated Integrin ITGA6 X1X2 Isoform in Mammals

  2025cites this paper
• Insights into Loquat Flowering Regulation Through Analysis of Alternative Splicing of Flowering-Time Genes and Functions of EjCO1 Isoforms

  2025cites this paper
• When the cell needs to respond to the environment: A chromatin-splicing love affair.

  2025cites this paper
• Ambient temperature dependent changes in DNA methylation in Arabidopsis thaliana Col-0 and the decrease in DNA methylation 1 mutant

  2025cites this paper
• Response of different cotton genotypes to salt stress and re-watering

  2025cites this paper
• The transcriptional regulator VAL1 promotes Arabidopsis flowering by repressing the organ boundary genes BOP1 and BOP2

  2025cites this paper
• The cAMP-dependent phosphorylation footprint in response to heat stress

  2024cites this paper
• Transcriptome and Physiological Analysis of Heat and Chilling Stress Responses in Chinese Cabbage (Brassicarapa L. var. pekinensis)

  2024cites this paper
• Circular RNA expression in turkey skeletal muscle satellite cells is significantly altered by thermal challenge

  2024cites this paper
• Physiological and transcriptomic profiles reveal key regulatory pathways involved in cold resistance in sunflower seedlings.

  2024cites this paper
• Thermoregulated transcriptomics: the molecular basis and biological significance of temperature-dependent alternative splicing

  2024cites this paper
• N-terminal acetylation orchestrates glycolate-mediated ROS homeostasis to promote rice thermoresponsive growth.

  2024cites this paper
• CsERECTA alternative splicing regulates the flowering numbers depending on temperature in Crocus sativus L.

  2024cites this paper
• Exogenous hydrogen sulphide promotes plant flowering through the Arabidopsis splicing factor AtU2AF65a.

  2024cites this paper
• Alternative Splicing in the Regulatory Circuit of Plant Temperature Response

  2023influential citation
• Role of Epigenetic Factors in Response to Stress and Establishment of Somatic Memory of Stress Exposure in Plants

  2023cites this paper
• Phosphorylation mediated regulation of RNA splicing in plants

  2023cites this paper
• Functional Verification of the Four Splice Variants from Ajania purpurea NST1 in Transgenic Tobacco

  2023cites this paper
• Is winter coming? Impact of the changing climate on plant responses to cold temperature.

  2023cites this paper
• Alternative Splicing of TaHsfA2-7 Is Involved in the Improvement of Thermotolerance in Wheat

  2023cites this paper
• The splicing factor 1–FLOWERING LOCUS M module spatially regulates temperature-dependent flowering by modulating FLOWERING LOCUS T and LEAFY expression

  2022cites this paper
• Comparative Analysis of Environment-Responsive Alternative Splicing in the Inflorescences of Cultivated and Wild Tomato Species

  2022cites this paper
• Characterization of the TCP Gene Family in Chrysanthemum nankingense and the Role of CnTCP4 in Cold Tolerance

  2022cites this paper
• Exogenous melatonin improves growth in hulless barley seedlings under cold stress by influencing the expression rhythms of circadian clock genes

  2021influential citation
• Multiple functions of SWI/SNF chromatin remodeling complex in plant-pathogen interactions

  2021cites this paper
• Transcriptional memory and response to adverse temperatures in plants

  2021cites this paper
• Regional Heritability Mapping of Quantitative Trait Loci Controlling Traits Related to Growth and Productivity in Popcorn (Zea mays L.)

  2021cites this paper
• Reading between the Lines: RNA-seq Data Mining Reveals the Alternative Message of the Rice Leaf Transcriptome in Response to Heat Stress

  2021cites this paper
• The U1 snRNP component RBP45d regulates temperature-responsive flowering in Arabidopsis thaliana

  2021cites this paper
• Beyond the Genetic Pathways, Flowering Regulation Complexity in Arabidopsis thaliana

  2021cites this paper
• Regulation of alternative splicing in response to temperature variation in plants

  2021cites this paper
• Long Noncoding RNAs in Plants.

  2021cites this paper
• Plant responses to high temperature: a view from pre-mRNA alternative splicing

  2021cites this paper
• Development of Transcriptome Analysis Methods

  2021cites this paper
• The framework of lncRNAs and genes at early pollen developmental stage in a PTGMS wheat line

  2020cites this paper
• Thermo-Sensitive Alternative Splicing of FLOWERING LOCUS M Is Modulated by Cyclin-Dependent Kinase G2

  2020cites this paper
• Molecular control of masting: an introduction to an epigenetic summer memory.

  2020cites this paper
• MicroRNAs as important regulators of heat stress responses in plants.

  2020cites this paper
• Temperature-Dependent Alternative Splicing of Precursor mRNAs and Its Biological Significance: A Review Focused on Post-Transcriptional Regulation of a Cold Shock Protein Gene in Hibernating Mammals

  2020influential citation
• Expression of LhFT1, the Flowering Inducer of Asiatic Hybrid Lily, in the Bulb Scales

  2020cites this paper
• Processing of coding and non-coding RNAs in plant development and environmental responses.

  2020cites this paper
• Role of Arabidopsis Splicing factor SF1 in Temperature-Responsive Alternative Splicing of FLM pre-mRNA

  2020cites this paper
• Protein phosphorylation associated with drought priming-enhanced heat tolerance in a temperate grass species

  2020cites this paper
• Alternative Splicing in the Regulation of Plant-Microbe Interactions.

  2019cites this paper
• The Temperature-Dependent Retention of Introns in GPI8 Transcripts Contributes to a Drooping and Fragile Shoot Phenotype in Rice

  2019cites this paper
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq

  2019cites this paper
• Patterns of alternative splicing in response to cold acclimation in fish

  2019cites this paper
• Developmental responses of bread wheat to changes in ambient temperature following deletion of a locus that includes FLOWERING LOCUS T1

  2018cites this paper
• High-Resolution RT-PCR Analysis of Alternative Barley Transcripts.

  2018cites this paper
• Effects of cold acclimation and dsRNA injections on Gs1l gene splicing in Drosophila montana

  2018cites this paper
• Genome-wide identification and characterization of the CKII gene family in the cultivated banana cultivar (Musa spp. cv Tianbaojiao) and the wild banana (Musa itinerans)

  2018cites this paper
• Arabidopsis thaliana ambient temperature responsive lncRNAs

  2018cites this paper
• Genome-wide analysis of the SPL/miR156 module and its interaction with the AP2/miR172 unit in barley

  2018cites this paper
• The cyclin‐dependent kinase G group defines a thermo‐sensitive alternative splicing circuit modulating the expression of Arabidopsis ATU2AF65A

  2018cites this paper
• PORCUPINE regulates development in response to temperature through alternative splicing

  2018cites this paper
• Global spatial analysis of Arabidopsis natural variants implicates 5′UTR splicing of LATE ELONGATED HYPOCOTYL in responses to temperature

  2018cites this paper
• The mRNA and miRNA transcriptomic landscape of Panax ginseng under the high ambient temperature

  2018cites this paper
• Conserved patterns of alternative splicing in response to cold acclimation in fish

  2018cites this paper
• Translating Flowering Time from Arabidopsis thaliana to Brassicaceae and Asteraceae Crop Species

  2018cites this paper
• Response of Gene Expression and Alternative Splicing to Distinct Growth Environments in Tomato

  2017cites this paper
• Heat Stress Regulates the Expression of Genes at Transcriptional and Post-Transcriptional Levels, Revealed by RNA-seq in Brachypodium distachyon

  2017cites this paper
• Mitochondrial genotype and phenotypic plasticity of gene expression in response to cold acclimation in killifish

  2017cites this paper
• Histone H3 lysine 36 methylation affects temperature-induced alternative splicing and flowering in plants

  2017cites this paper
• Genome-wide Analysis of Alternative Splicing in An Inbred Cabbage (Brassica oleracea L.) Line ‘HO’ in Response to Heat Stress

  2017cites this paper
• Molecular Regulation of Temperature-Dependent Floral Induction in Tulipa gesneriana1

  2017cites this paper
• Roles of pre-mRNA splicing and polyadenylation in plant development.

  2017cites this paper
• α3-Deletion Isoform of HLA-A11 Modulates Cytotoxicity of NK Cells: Correlations with HIV-1 Infection of Cells

  2017cites this paper
• Regulation and evolution of alternative splicing in plants

  2017cites this paper
• GENETIC AND EPIGENETIC REGULATION OF OVULE DEVELOPMENT AND PLANT REPRODUCTION IN A. THALIANA

  2017cites this paper
• Comparative landscape of alternative splicing in fruit plants

  2017cites this paper
• This information is current as HIV-1 Infection of Cells Cytotoxicity of NK Cells : Correlations with 3-Deletion Isoform of HLA-A 11 Modulates

  2017cites this paper
• Regulation of flowering time: a splicy business

  2017cites this paper
• Trimethylguanosine Synthase1 (TGS1) Is Essential for Chilling Tolerance1[OPEN]

  2017cites this paper
• Trimethylguanosine Synthase 1 ( TGS 1 ) Is Essential for Chilling Tolerance 1 [ OPEN ]

  2017cites this paper
• Multilevel Regulation of Abiotic Stress Responses in Plants

  2017cites this paper
• Integrating Omics and Alternative Splicing Reveals Insights into Grape Response to High Temperature1[OPEN]

  2017cites this paper
• Small RNAs in regulating temperature stress response in plants.

  2017cites this paper
• Herboxidiene triggers splicing repression and abiotic stress responses in plants

  2017cites this paper
• A Comprehensive Analysis of Alternative Splicing in Paleopolyploid Maize

  2017influential citation
• Towards understanding pre-mRNA splicing mechanisms and the role of SR proteins.

  2016cites this paper
• Alternative splicing and SR proteins in ABA-mediated stress responses

  2016cites this paper
• Alternative Splicing and SR proteins in ABA-mediated Stress Responses

  2016cites this paper
• A Developmental Transcriptome Map for Allotetraploid Arachis hypogaea

  2016cites this paper
• RNA-Seq Analysis of Rice Roots Reveals the Involvement of Post-Transcriptional Regulation in Response to Cadmium Stress

  2015cites this paper