Complete mitochondrial DNA sequence of Stenopus hispidus (Crustacea: Decapoda: Stenopodidea) and a novel tRNA gene cluster.

No abstract is available for this paper.

• Publication year

  2012

• Venue

  Marine Genomics

• Publication date

  2012-06-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/j.margen.2011.11.002PMID 22578654
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Complete mitochondrial genome of the Asian paddle crab Charybdis japonica (Crustacea: Decapoda: Portunidae): gene rearrangement of the marine brachyurans and phylogenetic considerations of the decapods

  2010cited by this paper
• Phylogenetic position, systematic status, and divergence time of the Procarididea (Crustacea: Decapoda)

  2010cited by this paper
• The complete mitochondrial genome of the ridgetail white prawn Exopalaemon carinicauda Holthuis, 1950 (Crustacean: Decapoda: Palaemonidae) revealed a novel rearrangement of tRNA genes.

  2009cited by this paper
• Decapod Phylogeny: What Can Protein-Coding Genes Tell Us?

  2009cited by this paper
• A Classification of Living and Fossil Genera of Decapod Crustaceans

  2009cited by this paper
• Evolution and radiation of shrimp-like decapods: an overview

  2009cited by this paper
• The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution

  2009cited by this paper
• Molecular Phylogeny of the Thalassinidea Based on Nuclear and Mitochondrial Genes

  2009cited by this paper
• The complete mitochondrial genome sequence of the hydrothermal vent galatheid crab Shinkaia crosnieri (Crustacea: Decapoda: Anomura): A novel arrangement and incomplete tRNA suite

  2008cited by this paper
• Phylogeny of Decapoda using two nuclear protein-coding genes: origin and evolution of the Reptantia.

  2008cited by this paper
• The complete mitochondrial genomes of two common shrimps (Litopenaeus vannamei and Fenneropenaeus chinensis) and their phylogenomic considerations.

  2007cited by this paper
• The complete mitochondrial genome of the Hawaiian anchialine shrimp Halocaridina rubra Holthuis, 1963 (Crustacea: Decapoda: Atyidae).

  2007cited by this paper
• The complete mitochondrial genome of the mantid shrimp Harpiosquilla harpax, and a phylogenetic investigation of the Decapoda using mitochondrial sequences.

  2006cited by this paper
• Decapod phylogeny: addition of fossil evidence to a robust morphological cladistic analysis

  2005cited by this paper
• Mitochondrial genome of the Chinese mitten crab Eriocheir japonica sinenesis (Brachyura: Thoracotremata: Grapsoidea) reveals a novel gene order and two target regions of gene rearrangements.

  2005cited by this paper
• ProtTest: selection of best-fit models of protein evolution

  2005cited by this paper
• Model-based multi-locus estimation of decapod phylogeny and divergence times.

  2005cited by this paper
• Sequencing and comparing whole mitochondrial genomes of animals.

  2005cited by this paper
• Complete mitochondrial DNA sequence of the Australian freshwater crayfish, Cherax destructor (Crustacea: Decapoda: Parastacidae): a novel gene order revealed.

  2004cited by this paper
• Phylogeny of the Decapoda reptantia: Resolution using three molecular loci and morphology

  2004cited by this paper
• Phylogenetic position of the Pentastomida and (pan)crustacean relationships

  2004cited by this paper
• A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.

  2003cited by this paper
• An index of substitution saturation and its application.

  2003cited by this paper
• Changing identities: tRNA duplication and remolding within animal mitochondrial genomes

  2003cited by this paper
• A new hypothesis of decapod phylogeny

  2003influential reference
• The Evolution of tRNA-Leu Genes in Animal Mitochondrial Genomes

  2003cited by this paper
• Complete mitochondrial DNA sequence of the swimming crab, Portunus trituberculatus (Crustacea: Decapoda: Brachyura).

  2003cited by this paper
• Complete mtDNA sequences of two millipedes suggest a new model for mitochondrial gene rearrangements: duplication and nonrandom loss.

  2002influential reference
• Complete mitochondrial DNA sequence of the Japanese spiny lobster, Panulirus japonicus (Crustacea: Decapoda).

  2002cited by this paper
• Novel rearrangements of arthropod mitochondrial DNA detected with long-PCR: applications to arthropod phylogeny and evolution.

  2002cited by this paper
• Complete Mitochondrial DNA Sequence of Tigriopus japonicus (Crustacea: Copepoda)

  2002cited by this paper
• DAMBE: software package for data analysis in molecular biology and evolution.

  2001cited by this paper
• An Updated Classification Of The Recent Crustacea

  2001cited by this paper
• Phylogeny of decapods: moving towards a consensus

  2001cited by this paper
• MRBAYES: Bayesian inference of phylogenetic trees

  2001cited by this paper
• Dramatic mitochondrial gene rearrangements in the hermit crab Pagurus longicarpus (Crustacea, anomura).

  2000cited by this paper
• The monophyletic origin of freshwater crayfish estimated from nuclear and mitochondrial DNA sequences

  2000cited by this paper
• Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that Pogonophora is not a phylum and Annelida and Arthropoda are not sister taxa.

  2000cited by this paper
• The complete sequence of the mitochondrial genome of Daphnia pulex (Cladocera: Crustacea).

  1999cited by this paper
• Animal mitochondrial genomes.

  1999cited by this paper
• Mitogenomics: digging deeper with complete mitochondrial genomes.

  1999cited by this paper
• Big trees from little genomes: mitochondrial gene order as a phylogenetic tool.

  1998cited by this paper
• MODELTEST: testing the model of DNA substitution

  1998cited by this paper
• tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

  1997cited by this paper
• The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

  1997cited by this paper
• Phylogenetic systematics of the reptantian Decapoda (Crustacea, Malacostraca)

  1995influential reference
• Deducing the pattern of arthropod phytogeny from mitochondrial DNA rearrangements

  1995cited by this paper
• DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates.

  1994cited by this paper
• Long PCR

  1994cited by this paper
• Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics

  1993cited by this paper
• Gene order comparisons for phylogenetic inference: evolution of the mitochondrial genome.

  1992cited by this paper
• Animal mitochondrial DNA: structure and evolution.

  1992cited by this paper
• Phylogenetic systematics of the Eucarida (Crustacea malacostraca)

  1988cited by this paper
• Tandem duplications in animal mitochondrial DNAs: variation in incidence and gene content among lizards.

  1987cited by this paper
• Duplication and remoulding of tRNA genes during the evolutionary rearrangement of mitochondrial genomes

  1987cited by this paper
• Phylogenetic and phenetic relationships among the lower decapoda

  1986cited by this paper
• The higher taxonomy and evolution of Decapoda (Crustacea)

  1981cited by this paper
• tRNA punctuation model of RNA processing in human mitochondria

  1981cited by this paper
• Behavior Associated with Pair Formation in the Banded Shrimp Stenopus hispidus (Olivier)

  1969cited by this paper
• The evolution of the Eucarida, (Crustacea, Eumalacostraca), in relation to the fossil record

  1963cited by this paper
• Studier over decapodernes slægtskabsforhold

  year unknowncited by this paper

• Mitochondrial phylogenomics reveal the origin and adaptive evolution of the deep-sea caridean shrimps (Decapoda: Caridea)

  2021cites this paper
• Characterization of the mitochondrial genome of an ancient amphipod Halice sp. MT-2017 (Pardaliscidae) from 10,908 m in the Mariana Trench

  2019cites this paper
• Hidden cases of tRNA gene duplication and remolding in mitochondrial genomes of amphipods.

  2019cites this paper
• Mitochondrial phylogenomics reveals insights into taxonomy and evolution of Penaeoidea (Crustacea: Decapoda)

  2018cites this paper
• The little shrimp that could: phylogeography of the circumtropical Stenopus hispidus (Crustacea: Decapoda), reveals divergent Atlantic and Pacific lineages

  2018cites this paper
• Complete mitochondrial genome of the first deep-sea spongicolid shrimp Spongiocaris panglao (Decapoda: Stenopodidea): Novel gene arrangement and the phylogenetic position and origin of Stenopodidea.

  2018cites this paper
• Phylogeny of Stenopodidea (Crustacea : Decapoda) shrimps inferred from nuclear and mitochondrial genes reveals non-monophyly of the families Spongicolidae and Stenopididae and most of their composite genera

  2016cites this paper
• Evolution of mitochondrial genomes in Baikalian amphipods

  2016cites this paper
• Phylomitogenomics of Malacostraca (Arthropoda: Crustacea)

  2015cites this paper
• Towards a comprehensive picture of alloacceptor tRNA remolding in metazoan mitochondrial genomes

  2015cites this paper
• Mitochondrial Genomes of two Brachyuran Crabs (Crustacea: Decapoda) and Phylogenetic Analysis

  2014influential citation
• Mitogenomic analysis of decapod crustacean phylogeny corroborates traditional views on their relationships.

  2013cites this paper
• Evolution and phylogeny of the mud shrimps (Crustacea: Decapoda) revealed from complete mitochondrial genomes

  2012influential citation