Methodological assessment of 2b-RAD genotyping technique for population structure inferences in yellowfin tuna (Thunnus albacares).

No abstract is available for this paper.

• Publication year

  2016

• Venue

  Marine Genomics

• Publication date

  2016-02-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1016/j.margen.2015.12.002PMID 26711352
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Erratum to: Genetic Population Structure of Thunnus albacares in the Central Pacific Ocean Based on mtDNA COI Gene Sequences

  2015cited by this paper
• Genetic Population Structure of Thunnus albacares in the Central Pacific Ocean Based on mtDNA COI Gene Sequences

  2015cited by this paper
• Restriction site‐associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference

  2015cited by this paper
• Demystifying the RAD fad

  2014cited by this paper
• Outlier SNP markers reveal fine‐scale genetic structuring across European hake populations (Merluccius merluccius)

  2014cited by this paper
• Recent novel approaches for population genomics data analysis

  2014cited by this paper
• Single population and common natal origin for Adriatic Scomber scombrus stocks: evidence from an integrated approach

  2013cited by this paper
• Genotyping‐by‐sequencing in ecological and conservation genomics

  2013cited by this paper
• Mitochondrial DNA analysis reveals three stocks of yellowfin tuna Thunnus albacares (Bonnaterre, 1788) in Indian waters

  2013cited by this paper
• Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna

  2013cited by this paper
• Life in 3-D: life history strategies in tunas, mackerels and bonitos

  2013cited by this paper
• Stacks: an analysis tool set for population genomics

  2013cited by this paper
• 2b-RAD: a simple and flexible method for genome-wide genotyping

  2012cited by this paper
• Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences

  2011cited by this paper
• Genome-wide genetic marker discovery and genotyping using next-generation sequencing

  2011cited by this paper
• Risks of ignoring fish population spatial structure in fisheries management

  2011cited by this paper
• Genomics and the future of conservation genetics

  2010cited by this paper
• Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

  2010cited by this paper
• METHODOLOGY ARTICLE Open Access

  2009cited by this paper
• Assessing statistical power of SNPs for population structure and conservation studies

  2009cited by this paper
• Integrating genetic data into management of marine resources: how can we do it better?

  2008cited by this paper
• Revealing cryptic spatial patterns in genetic variability by a new multivariate method

  2008cited by this paper
• Evidence for fine geographical scale heterogeneity in gene frequencies in yellowfin tuna (Thunnus albacares) from the north Indian Ocean around Sri Lanka

  2008cited by this paper
• Spatial differentiation in the eastern Pacific yellowfin tuna revealed by microsatellite variation

  2006cited by this paper
• Consequences of the historical demography on the global population structure of two highly migratory cosmopolitan marine fishes: the yellowfin tuna (Thunnus albacares) and the skipjack tuna (Katsuwonus pelamis)

  2005cited by this paper
• SNPs in ecology, evolution and conservation

  2004cited by this paper
• Population structure of yellowfin tuna (Thunnusalbacares) in the western Pacific Ocean, inferred from microsatellite loci

  2001cited by this paper
• Mitochondrial DNA Analysis

  1999cited by this paper
• Global population structure of yellowfin tuna, Thunnus albacares, inferred from allozyme and mitochondrial DNA variation

  1997cited by this paper
• Allozyme and mitochondrial DNA variation in yellowfin tuna (Thunnus albacares) from the Pacific Ocean

  1994cited by this paper

• Heterozygote advantage of hybrid varieties from red crucian carp and white crucian carp revealed by genome wide association analysis

  2025cites this paper
• Historical spread routes of wild walnuts in Central Asia shaped by man-made and nature

  2024cites this paper
• Seascape genomics of the pink abalone (Haliotis corrugata): An insight into a cross-border species in the northeast Pacific coast.

  2023cites this paper
• Population genetics analysis of the black rockfish Sebastes schlegelii in Northern China based on 2b-RAD simplified genome sequencing

  2023cites this paper
• Hidden in the ocean: The importance of detecting hybridisation in pelagic and deep‐water fishes

  2023cites this paper
• Isolation and characterization of 66 SNP markers in blotched snakehead (Channa maculata) using 2b-RAD sequencing

  2023cites this paper
• Nursery origin of yellowfin tuna in the western Atlantic Ocean: significance of Caribbean Sea and trans-Atlantic migrants

  2023cites this paper
• Genomic data resolve long-standing uncertainty by distinguishing white marlin (Kajikia albida) and striped marlin (K. audax) as separate species

  2023cites this paper
• Comparative Analysis of Genetic Structure and Diversity in Five Populations of Yellowtail Kingfish (Seriola aureovittata)

  2023cites this paper
• Single Nucleotide Polymorphism Markers with Applications in Conservation and Exploitation of Aquatic Natural Populations

  2023cites this paper
• The Research Progress of 2B-RAD Sequencing Technology in Aquatic Animals

  2022cites this paper
• Eco-taxonomic study for some tuna genotypes collected from Egyptian and Libyan coasts on the molecular level

  2022influential citation
• Lack of genetic differentiation in yellowfin tuna has conservation implications in the Eastern Pacific Ocean

  2022influential citation
• SNP genotyping reveals substructuring in weakly differentiated populations of Atlantic cod (Gadus morhua) from diverse environments in the Baltic Sea

  2020cites this paper
• Helping decision making for reliable and cost‐effective 2b‐RAD sequencing and genotyping analyses in non‐model species

  2020cites this paper
• Population Genomics: Marine Organisms

  2020cites this paper
• Genetic Variation, GWAS and Accuracy of Prediction for Host Resistance to Sparicotyle chrysophrii in Farmed Gilthead Sea Bream (Sparus aurata)

  2020cites this paper
• Short Communication: Genetic structure of Longtail Tuna Thunnus tonggol (Bleeker, 1851) in Java Sea, Indonesia

  2020cites this paper
• SNP discovery for genetic diversity and population structure analysis coupled with restriction-associated DNA (RAD) sequencing in walnut cultivars of Sichuan Province, China

  2020cites this paper
• Mediterranean swordfish (Xiphias gladius Linnaeus, 1758) population structure revealed by microsatellite DNA: genetic diversity masked by population mixing in shared areas

  2020cites this paper
• When size matters: The gonads of larger female yellowfin tuna (Thunnus albacares) have different fatty acid profiles compared to smaller individuals

  2020cites this paper
• Genetic Diversity and Genetic Structure of the Wild Tsushima Leopard Cat from Genome-Wide Analysis

  2020cites this paper
• Genome Wide Analysis for Growth at Two Growth Stages in A New Fast-Growing Common Carp Strain (Cyprinus carpio L.)

  2020cites this paper
• Agrigenomics Research

  2019cites this paper
• UNIVERSIDAD SAN FRANCISCO DE QUITO USFQ

  2019influential citation
• Identification of sex‐specific markers and heterogametic XX/XY sex determination system by 2b‐RAD sequencing in redtail catfish ( Mystus wyckioides )

  2019cites this paper
• Meta-analysis of Factors Influencing Population Differentiation in Yellowfin Tuna (Thunnus albacares)

  2019cites this paper
• Analysis of genome-wide SNPs based on 2b-RAD sequencing of pooled samples reveals signature of selection in different populations of Haemonchus contortus

  2019cites this paper
• Population Genomics Applied to Fishery Management and Conservation

  2019cites this paper
• Improvement of the Pacific bluefin tuna (Thunnus orientalis) reference genome and development of male-specific DNA markers

  2019cites this paper
• Multilocus data reveal deep phylogenetic relationships and intercontinental biogeography of the Eurasian-North American genus Corylus (Betulaceae).

  2019cites this paper
• Genome‐wide SNPs resolve spatiotemporal patterns of connectivity within striped marlin (Kajikia audax), a broadly distributed and highly migratory pelagic species

  2019cites this paper
• Characterization of Population Genetic Structure of red swamp crayfish, Procambarus clarkii, in China

  2018cites this paper
• Population connectivity, local adaptation, and biomineralization of deep-sea mussels (Bivalvia: Mytilidae) in Northwestern Pacific

  2018cites this paper
• SNP identification and validation on genomic DNA for studying genetic diversity in Thunnus albacares and Scomberomorus brasiliensis by combining RADseq and long read high throughput sequencing

  2018cites this paper
• Combined QTL and Genome Scan Analyses With the Help of 2b-RAD Identify Growth-Associated Genetic Markers in a New Fast-Growing Carp Strain

  2018cites this paper
• The population genomics of yellowfin tuna (Thunnus albacares) at global geographic scale challenges current stock delineation

  2018cites this paper
• Genetic evaluation of population structure in white marlin (Kajikia albida): the importance of statistical power

  2018cites this paper
• Genetics of resistance to photobacteriosis in gilthead sea bream (Sparus aurata) using 2b-RAD sequencing

  2018cites this paper
• Performance and precision of double digestion RAD (ddRAD) genotyping in large multiplexed datasets of marine fish species.

  2018cites this paper
• Evaluation of Population Structure and the Interspecific Relationship of Striped Marlin (Kajikia Audax) and White Marlin (K. Albida) Based on Traditional or Genome-Wide Molecular Markers

  2018cites this paper
• Genomic analysis reveals multiple mismatches between biological and management units in yellowfin tuna (Thunnus albacares)

  2018cites this paper
• Genomic analyses of Northern snakehead (Channa argus) populations in North America

  2018cites this paper
• 2b-RAD genotyping for population genomic studies of Chagas disease vectors: Rhodnius ecuadoriensis in Ecuador

  2017cites this paper
• Development of tools for tracebility and for assessing the genetic impact of aquaculture

  2017cites this paper
• Population genetics analysis of the Nujiang catfish Creteuchiloglanis macropterus through a genome-wide single nucleotide polymorphisms resource generated by RAD-seq

  2017cites this paper
• Using a butterflyfish genome as a general tool for RAD‐Seq studies in specialized reef fish

  2017cites this paper
• Development of high-throughput technologies for species of veterinary relevance. Investigation of the genetic basis of mandibular prognathism in the European seabass (Dicentrarchus labrax)

  2017cites this paper
• Genome-wide SNP analysis using 2b-RAD sequencing identifies the candidate genes putatively associated with resistance to ivermectin in Haemonchus contortus

  2017cites this paper
• Author Correction: Population genetics analysis of the Nujiang catfish Creteuchiloglanis macropterus through a genome-wide single nucleotide polymorphisms resource generated by RAD-seq

  2017cites this paper
• Genomic Differentiation and Demographic Histories of Atlantic and Indo-Pacific Yellowfin Tuna (Thunnus albacares) Populations

  2017cites this paper
• A draft genome assembly of southern bluefin tuna Thunnus maccoyii

  2016cites this paper
• Putting all the pieces together: integrating current knowledge of the biology, ecology, fisheries status, stock structure and management of yellowfin tuna (Thunnus albacares)

  2016influential citation
• Serial sequencing of isolength RAD tags for cost-efficient genome-wide profiling of genetic and epigenetic variations

  2016cites this paper
• Sex matters in Massive Parallel Sequencing: Evidence for biases in genetic parameter estimation and investigation of sex determination systems

  2016cites this paper
• Insights into isogenic clonal fish line development using high-throughput sequencing technologies

  2016cites this paper
• RAD SNP markers as a tool for conservation of dolphinfish Coryphaena hippurus in the Mediterranean Sea: Identification of subtle genetic structure and assessment of populations sex-ratios.

  2016cites this paper
• Genomic Prediction of Resistance to Pasteurellosis in Gilthead Sea Bream (Sparus aurata) Using 2b-RAD Sequencing

  2016cites this paper
• An integrated genomic approach for the study of mandibular prognathism in the European seabass (Dicentrarchus labrax)

  2016cites this paper