Complete mitochondrial genomes of two Japanese precious corals, Paracorallium japonicum and Corallium konojoi (Cnidaria, Octocorallia, Coralliidae): notable differences in gene arrangement.

No abstract is available for this paper.

• Publication year

  2011

• Venue

  Gene

• Publication date

  2011-05-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1016/j.gene.2011.01.019PMID 21310221
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Precious corals (Coralliidae) from north-western Atlantic Seamounts

  2010cited by this paper
• Molecular systematics of the bubblegum coral genera (Paragorgiidae, Octocorallia) and description of a new deep-sea species.

  2010influential reference
• Molecular phylogenetic insights into the evolution of Octocorallia: a review.

  2010cited by this paper
• The mitochondrial genome of Hydra oligactis (Cnidaria, Hydrozoa) sheds new light on animal mtDNA evolution and cnidarian phylogeny.

  2008cited by this paper
• Unique Mitogenomic Features in the Scleractinian Family Pocilloporidae (Scleractinia: Astrocoeniina)

  2008cited by this paper
• The Mitochondrial Genome of a Deep-Sea Bamboo Coral (Cnidaria, Anthozoa, Octocorallia, Isididae): Genome Structure and Putative Origins of Replication Are Not Conserved Among Octocorals

  2008influential reference
• The complete mitochondrial genomes of needle corals, Seriatopora spp. (Scleractinia: Pocilloporidae): an idiosyncratic atp8, duplicated trnW gene, and hypervariable regions used to determine species phylogenies and recently diverged populations.

  2008cited by this paper
• GraphDNA: a Java program for graphical display of DNA composition analyses

  2007cited by this paper
• Mitochondrial genome of the moon jelly Aurelia aurita (Cnidaria, Scyphozoa): A linear DNA molecule encoding a putative DNA-dependent DNA polymerase.

  2006cited by this paper
• No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation

  2006cited by this paper
• Naked corals: skeleton loss in Scleractinia.

  2006influential reference
• A molecular phylogenetic analysis of the Octocorallia (Cnidaria: Anthozoa) based on mitochondrial protein-coding sequences.

  2006cited by this paper
• A new genus of the scleraxonian family Coralliidae (Octocorallia: Gorgonacea).

  2003influential reference
• Frequent Mitochondrial Gene Rearrangements at the Hymenopteran nad3–nad5 Junction

  2003cited by this paper
• MrBayes 3: Bayesian phylogenetic inference under mixed models

  2003cited by this paper
• Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria)

  2002cited by this paper
• TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

  2002cited by this paper
• The Mitochondrial Genome of Acropora tenuis (Cnidaria; Scleractinia) Contains a Large Group I Intron and a Candidate Control Region

  2002cited by this paper
• Complete Mitochondrial DNA Sequence of Conger myriaster (Teleostei: Anguilliformes): Novel Gene Order for Vertebrate Mitochondrial Genomes and the Phylogenetic Implications for Anguilliform Families

  2001cited by this paper
• Intramitochondrial recombination - is it why some mitochondrial genes sleep around?

  2001cited by this paper
• The duplication/random loss model for gene rearrangement exemplified by mitochondrial genomes of deu

  2000cited by this paper
• Evolutionary dynamics of a mitochondrial rearrangement "hot spot" in the Hymenoptera.

  1999cited by this paper
• Animal mitochondrial genomes.

  1999cited by this paper
• Mitochondrial DNA: a tool for populational genetics studies.

  1998cited by this paper
• Cosmopolitan distribution of the large composite microbial mat spirochete, Spirosymplokos deltaeiberi.

  1998cited by this paper
• Tandem repeat polymorphism and heteroplasmy in the mitochondrial control region of redfishes (Sebastes: Scorpaenidae).

  1998cited by this paper
• Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome.

  1997cited by this paper
• DNA sequence variation of mitochondrial large-subunit rRNA provides support for a two-subclass organization of the Anthozoa (Cnidaria).

  1996cited by this paper
• A simple vectorial representation of DNA sequences for the detection of replication origins in bacteria.

  1996cited by this paper
• Inverted repeats, stem‐loops, and cruciforms: Significance for initiation of DNA replication

  1996cited by this paper
• A coral mitochondrial mutS gene

  1995cited by this paper
• Animal mitochondrial DNA: structure and evolution.

  1992influential reference
• Nuclear-encoded transfer RNAs in plant mitochondria.

  1992cited by this paper
• In vivo import of a normal or mutagenized heterologous transfer RNA into the mitochondria of transgenic plants: towards novel ways of influencing mitochondrial gene expression?

  1992cited by this paper
• Study of precious coral diver survey with open circuit air SCUBA diving at 108m.

  1991cited by this paper
• Replication and transcription of vertebrate mitochondrial DNA.

  1991cited by this paper
• Kinetoplastid mitochondria contain functional tRNAs which are encoded in nuclear DNA and also contain small minicircle and maxicircle transcripts of unknown function.

  1989cited by this paper
• Slipped-strand mispairing: a major mechanism for DNA sequence evolution.

  1987cited by this paper
• tRNA punctuation model of RNA processing in human mitochondria

  1981cited by this paper
• Preliminary note on the Coralliidae of Japan

  year unknowncited by this paper

• The complete mitochondrial genome of Pleurocorallium inutile (Octocorallia: Scleralcyonacea: Coralliidae)

  2025influential citation
• The complete mitochondrial genomes of Litophyton sp. and Stereonephthya sp., members of family Nephtheidae (Cnidaria: Anthozoa: Octocorallia)

  2025cites this paper
• Trace-DNA from a century-old holotype specimen resolves taxonomic uncertainties: the case of the Hawaiian pink precious coral (Pleurocorallium secundum), a CITES-listed species used in jewelry

  2025cites this paper
• The complete mitochondrial genome of Hanabira yukibana Lau, Stokvis, Imahara & Reimer, 2019 (Cnidaria: Anthozoa: Octocorallia)

  2025cites this paper
• Mitogenomic characterization and phylogenetic positioning of Acropora lutkeni (Scleractinia, Acroporidae)

  2025cites this paper
• Relative performance of three phylogenetic methods based on complete mitochondrial genomes of barnacle

  2025cites this paper
• Molecular phylogenetic relationships based on mitochondrial genomes of novel deep-sea corals (Octocorallia: Alcyonacea): Insights into slow evolution and adaptation to extreme deep-sea environments

  2024influential citation
• Extensive mitochondrial genomic analyses reveal dynamic gene order rearrangements in the class Octocorallia (Cnidaria: Anthozoa)

  2024cites this paper
• New mitochondrial gene order arrangements and evolutionary implications in the class Octocorallia

  2024cites this paper
• New mitochondrial gene order arrangements and evolutionary implications in the subclass Octocorallia

  2024cites this paper
• Growth rate estimation by 210Pb chronology in precious corals collected off the southern coast of Japan

  2023cites this paper
• Mito-nuclear discordance within Anthozoa, with notes on unique properties of their mitochondrial genomes

  2023cites this paper
• Description of the fifth sea pen species that attaches to hard substrates by modifying its peduncle

  2023cites this paper
• When distant relatives look too alike: a new family, two new genera and a new species of deep-sea Umbellula-like sea pens (Anthozoa, Octocorallia, Pennatulacea)

  2022cites this paper
• RADIOCARBON DATING OF PRECIOUS CORALS OFF THE SOUTHWEST COAST OF KOCHI PREFECTURE, SOUTHWEST JAPAN

  2020cites this paper
• Novel diversity in mitochondrial genomes of deep-sea Pennatulacea (Cnidaria: Anthozoa: Octocorallia)

  2019influential citation
• Mitogenomic phylogenetic analyses of Leptogorgia virgulata and Leptogorgia hebes (Anthozoa: Octocorallia) from the Gulf of Mexico provides insight on Gorgoniidae divergence between Pacific and Atlantic lineages

  2019cites this paper
• The Drivers of Mitochondrial DNA Divergences

  2018cites this paper
• Mitochondrial RNA processing in absence of tRNA punctuations in octocorals

  2017cites this paper
• Arginine Kinases from the Precious Corals Corallium rubrum and Paracorallium japonicum: Presence of Two Distinct Arginine Kinase Gene Lineages in Cnidarians

  2017cites this paper
• Mitochondrial genome sequences uncover evolutionary relationships of two Sargassum subgenera, Bactrophycus and Sargassum

  2017cites this paper
• Complete mitochondrial genome of leaf coral Pavona decussata (Scleractinia, Agariciidae)

  2016cites this paper
• Complete mitochondrial genome of Junceella fragilis (Gorgonacea, Ellisellidae)

  2016cites this paper
• The mitochondrial genome of the gold-dust day gecko, Phelsuma laticauda (Sauria, Gekkota, Gekkonidae)

  2016cites this paper
• The complete mitochondrial genome of the black-tailed brush lizard Urosaurus nigricaudus (Reptilia, Squamata, Phrynosomatidae)

  2016cites this paper
• X-ray micro-CT observation of the apical skeleton of Japanese white coral Corallium konojoi

  2016cites this paper
• Population Genetic Structure of Corallium rubrum in the Mediterranean Sea: Diversity, Phylogeography, and Bathymetric Patterns

  2016cites this paper
• Molecular Forensics into the Sea: How Molecular Markers Can Help to Struggle Against Poaching and Illegal Trade in Precious Corals?

  2016cites this paper
• Crossroads in Earth and Planetary Materials. Block-by-block and layer-by-layer growth modes in coral skeletons

  2015cites this paper
• Sexual Reproduction in Precious Corals (Coralliidae) Collected in the Ryukyu Archipelago1

  2015cites this paper
• Phylogeny and systematics of deep-sea precious corals (Anthozoa: Octocorallia: Coralliidae).

  2015cites this paper
• Identification of the chemical form of sulfur compounds in the Japanese pink coral (Corallium elatius) skeleton using μ-XRF/XAS speciation mapping.

  2014cites this paper
• A phylogenetic approach to octocoral community structure in the deep Gulf of Mexico

  2014cites this paper
• Octocorals of Alaska: Comparing morphologic and genetic methods of community composition analysis

  2014cites this paper
• Complete mitochondrial genomes elucidate phylogenetic relationships of the deep-sea octocoral families Coralliidae and Paragorgiidae

  2014cites this paper
• Octocoral Mitochondrial Genomes Provide Insights into the Phylogenetic History of Gene Order Rearrangements, Order Reversals, and Cnidarian Phylogenetics

  2014influential citation
• A description of the complete mitochondrial genomes of Amphiporus formidabilis, Prosadenoporus spectaculum and Nipponnemertes punctatula (Nemertea: Hoplonemertea: Monostilifera)

  2014cites this paper
• Molecular and morphological data support reclassification of the octocoral genus Isidoides

  2013cites this paper
• Quantifying Spatial Genetic Structuring in Mesophotic Populations of the Precious Coral Corallium rubrum

  2013cites this paper
• Complete mitochondrial genomes of the Japanese pink coral (Corallium elatius) and the Mediterranean red coral (Corallium rubrum): a reevaluation of the phylogeny of the family Coralliidae based on molecular data.

  2013cites this paper
• Mitogenomics at the base of Metazoa.

  2013cites this paper
• Cnidarian phylogenetic relationships as revealed by mitogenomics

  2013cites this paper
• The Mitochondrial Genome of Paraminabea aldersladei (Cnidaria: Anthozoa: Octocorallia) Supports Intramolecular Recombination as the Primary Mechanism of Gene Rearrangement in Octocoral Mitochondrial Genomes

  2012influential citation
• The Complete Mitochondrial Genomes of Six Heterodont Bivalves (Tellinoidea and Solenoidea): Variable Gene Arrangements and Phylogenetic Implications

  2012cites this paper
• A time-calibrated molecular phylogeny of the precious corals: reconciling discrepancies in the taxonomic classification and insights into their evolutionary history

  2012cites this paper
• Comparative analyses of the complete mitochondrial genomes of Ascaris lumbricoides and Ascaris suum from humans and pigs.

  2012cites this paper
• Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record.

  2012cites this paper
• Evolution of Linear Mitochondrial Genomes in Medusozoan Cnidarians

  2011cites this paper
• The complete mitochondrial genome of Calicogorgia granulosa (Anthozoa: Octocorallia): potential gene novelty in unidentified ORFs formed by repeat expansion and segmental duplication.

  2011cites this paper
• Evol u ti on of l i n e ar mi toc h on d r i al ge n ome s i n me d u s oz oan c n i d ar i an s

  2011cites this paper
• A unique horizontal gene transfer event has provided the octocoral mitochondrial genome with an active mismatch repair gene that has potential for an unusual self-contained function

  2011cites this paper
• Specific organic matrix characteristics in skeletons of Corallium species

  2011cites this paper
• GENETIC VARIABILITY AND STRUCTURING OF DEEP CORALLIUM RUBRUM (Linnaeus, 1758) POPULATIONS

  2011influential citation
• MITOGENOME REPORT The complete mitochondrial genome of the bubble-gum coral Paragorgia papillata (Octocorallia: Coralliidae) from the seamount in the tropical Western Pacific

  year unknowncites this paper