Fine‐scale population structure in a desert amphibian: landscape genetics of the black toad (Bufo exsul)

No abstract is available for this paper.

• Publication year

  2009

• Venue

  Molecular Ecology

• Publication date

  2009-09-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1111/j.1365-294X.2009.04338.xPMID 19708887
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• BOTTLENECK : A Computer Program for Detecting Recent Reductions in the Effective Population Size Using Allele Frequency Data

  2017influential reference
• Adaptive Population Divergence in Cryptic Color-Pattern Following a Reduction in Gene Flow

  2009cited by this paper
• A new method for estimating effective population sizes from a single sample of multilocus genotypes

  2009influential reference
• Small and Declining Populations

  2009cited by this paper
• Mitochondrial DNA evolution in the Anaxyrus boreas species group.

  2009cited by this paper
• Landscape genetics and least‐cost path analysis reveal unexpected dispersal routes in the California tiger salamander (Ambystoma californiense)

  2009influential reference
• Amphibian Declines: The Conservation Status of United States Species

  2008influential reference
• Linking movement behaviour to dispersal and divergence in plethodontid salamanders

  2008cited by this paper
• Putting the ‘landscape’ in landscape genetics

  2007cited by this paper
• Inference of Population Structure Under a Dirichlet Process Model

  2007influential reference
• vegan : Community Ecology Package. R package version 1.8-5

  2007cited by this paper
• Habitat suitability models for desert amphibians

  2006cited by this paper
• Gene flow and functional connectivity in the natterjack toad

  2006cited by this paper
• genalex 6: genetic analysis in Excel. Population genetic software for teaching and research

  2006cited by this paper
• Comparison of methods for detecting bottlenecks from microsatellite loci

  2006cited by this paper
• Sixteen microsatellite loci for the Bufo boreas group

  2006cited by this paper
• INVITED REVIEW: What is a population? An empirical evaluation of some genetic methods for identifying the number of gene pools and their degree of connectivity

  2006cited by this paper
• Low gene flow but high genetic diversity in the threatened Mallorcan midwife toad Alytes muletensis

  2005cited by this paper
• Landscape genetics of the blotched tiger salamander (Ambystoma tigrinum melanostictum)

  2005influential reference
• Conservation genetics of amphibians

  2005cited by this paper
• THE HISTORY OF A NEARCTIC COLONIZATION: MOLECULAR PHYLOGENETICS AND BIOGEOGRAPHY OF THE NEARCTIC TOADS (BUFO)

  2004cited by this paper
• Beyond FST: Analysis of population genetic data for conservation

  2004influential reference
• Reconciling Genetic and Demographic Estimators of Effective Population Size in the Anuran Amphibian Bufo Calamita

  2004cited by this paper
• Landscape connectivity influences gene flow in a roe deer population inhabiting a fragmented landscape: an individual–based approach

  2004cited by this paper
• Genetic assignment methods for the direct, real‐time estimation of migration rate: a simulation‐based exploration of accuracy and power

  2004cited by this paper
• Can assignment tests measure dispersal?

  2004cited by this paper
• Climate and habitat barriers to dispersal in the highly mobile grey wolf

  2004cited by this paper
• Habitat fragmentation causes bottlenecks and inbreeding in the European tree frog (Hyla arborea)

  2004cited by this paper
• BAPS 2: enhanced possibilities for the analysis of genetic population structure

  2004cited by this paper
• Micro-Checker: Software for identifying and correcting genotyping errors in microsatellite data

  2004influential reference
• EFFECTIVE POPULATION SIZES AND TEMPORAL STABILITY OF GENETIC STRUCTURE IN RANA PIPIENS, THE NORTHERN LEOPARD FROG

  2004cited by this paper
• Bayesian inference of recent migration rates using multilocus genotypes.

  2003influential reference
• Landscape genetics: combining landscape ecology and population genetics

  2003influential reference
• Huge populations and old species of Costa Rican and Panamanian dirt frogs inferred from mitochondrial and nuclear gene sequences

  2003cited by this paper
• Blackwell Publishing, Ltd.

  2003cited by this paper
• HABITAT PATCH OCCUPANCY BY TOADS (BUFO PUNCTATUS) IN A NATURALLY FRAGMENTED DESERT LANDSCAPE

  2003cited by this paper
• POPULATION STATUS AND CONSERVATION OF THE BLACK TOAD, BUFO EXSUL

  2003influential reference
• Gene flow and the limits to natural selection

  2002cited by this paper
• ADAPTIVE DIVERGENCE AND THE BALANCE BETWEEN SELECTION AND GENE FLOW: LAKE AND STREAM STICKLEBACK IN THE MISTY SYSTEM

  2002cited by this paper
• Deleterious Effects of Restricted Gene Flow in Fragmented Populations

  2002cited by this paper
• Detection of reduction in population size using data from microsatellite loci

  2001influential reference
• Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach

  2001influential reference
• Geographical and genetic distances among zooplankton populations in a set of interconnected ponds: a plea for using GIS modelling of the effective geographical distance

  2001cited by this paper
• Microsatellite variation and fine‐scale population structure in the wood frog (Rana sylvatica)

  2001cited by this paper
• Metapopulation Dynamics and Amphibian Conservation

  2001cited by this paper
• Microsatellite analysis of natterjack toad Bufo calamita Laurenti populations: consequences of dispersal from a Pleistocene refugium

  2000cited by this paper
• The genetics of amphibian declines: population substructure and molecular differentiation in the Yosemite Toad, Bufo canorus (Anura, Bufonidae) based on single‐strand conformation polymorphism analysis (SSCP) and mitochondrial DNA sequence data

  2000cited by this paper
• Experimental evaluation of the usefulness of microsatellite DNA for detecting demographic bottlenecks

  2000cited by this paper
• Dispersal, Gene Flow, and Population Structure

  1999cited by this paper
• Microsatellites — Evolution and Applications

  1999influential reference
• Small effective population size in the long‐toed salamander

  1999cited by this paper
• Patterns of gene flow and population genetic structure in the canyon treefrog, Hyla arenicolor (Cope)

  1999influential reference
• Genetic neighbourhood and effective population size for two endangered frogs

  1999cited by this paper
• Computer note. BOTTLENECK: a computer program for detecting recent reductions in the effective size using allele frequency data

  1999influential reference
• GENE FLOW AND POPULATION SUBDIVISION IN THE STREAMSIDE SALAMANDER, AMBYSTOMA BARBOURI

  1999cited by this paper
• Distribution of woodland amphibians along a forest fragmentation gradient

  1998cited by this paper
• Evolution of a Species' Range

  1997cited by this paper
• Geographical Range Size and the Conservation of Mexican Mammals

  1997cited by this paper
• Effective number of breeding adults in Bufo bufo estimated from age‐specific variation at minisatellite loci

  1997cited by this paper
• Genetic substructuring as a result of barriers to gene flow in urban Rana temporaria (common frog) populations: implications for biodiversity conservation

  1997cited by this paper
• Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data.

  1996influential reference
• Gentleman R: R: A language for data analysis and graphics

  1996cited by this paper
• Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling.

  1995cited by this paper
• Risks of Population Extinction from Demographic and Environmental Stochasticity and Random Catastrophes

  1993cited by this paper
• Ecological consequences of tail injury in Rana tadpoles

  1990cited by this paper
• Regression and time series model selection in small samples

  1989cited by this paper
• Gene flow and the geographic structure of natural populations.

  1987cited by this paper
• The Evolution of Species?

  1987cited by this paper
• Multiple regression and correlation extensions of the mantel test of matrix correspondence

  1986cited by this paper
• Information Theory and an Extension of the Maximum Likelihood Principle

  1973cited by this paper
• The detection of disease clustering and a generalized regression approach.

  1967cited by this paper
• Isolation by Distance.

  1943cited by this paper

• Microbial communities of selected regions of the Deep Springs Lake aquifer system

  2025cites this paper
• Demographic expansion and panmixia in a St. Martin endemic, Anolis pogus, coincides with the decline of a competitor

  2025cites this paper
• Co‐precipitation of primary dolomite and Mg‐rich clays in Deep Springs Lake, California

  2024influential citation
• Microgeographic variation in demography and thermal regimes stabilize regional abundance of a widespread freshwater fish.

  2023cites this paper
• Fine-scale functional connectivity of two syntopic pond-breeding amphibians with contrasting life-history traits: an integrative assessment of direct and indirect estimates of dispersal

  2023cites this paper
• Natural and anthropogenic landscape factors shape functional connectivity of an ecological specialist in urban Southern California

  2022cites this paper
• Selection and localised genetic structure in the threatened Manauense Harlequin Frog (Bufonidae: Atelopus manauensis)

  2022cites this paper
• Unravelling the cryptic diversity and evolution of the dwarf swamp frog Pseudopaludicola mystacalis (Anura, Leptodactylidae) in open habitats of South America

  2022cites this paper
• Reconciling direct and indirect estimates of functional connectivity in a Mediterranean pond‑breeding amphibian

  2021cites this paper
• Population genetic structure of the Natterjack toad (Epidalea calamita) in Ireland: implications for conservation management

  2021cites this paper
• Reconciling direct and indirect estimates of functional connectivity in a Mediterranean pond-breeding amphibian

  2021cites this paper
• Two New Cryptic Endemic Toads of Bufo Discovered in Central Nevada, Western United States (Amphibia: Bufonidae: Bufo [Anaxyrus])

  2020cites this paper
• Conservation genomics of the threatened western spadefoot, Spea hammondii, in urbanized southern California.

  2020cites this paper
• An integrative demographic study of the Iberian painted frog (Discoglossus galganoi): inter-annual variation in the effective to census population size ratio, with insights on mating system and breeding success.

  2020cites this paper
• Genetic diversity and structure of two endangered mole salamander species of the Trans-Mexican Volcanic Belt

  2019cites this paper
• Genetic and phylogenetic structure of Hynobius quelpaertensis, an endangered endemic salamander species on the Korean Peninsula

  2019cites this paper
• Regional replication of landscape genetics analyses of the Mississippi slimy salamander, Plethodon mississippi

  2019cites this paper
• Urbanization reduces genetic connectivity in bobcats (Lynx rufus) at both intra– and interpopulation spatial scales

  2019cites this paper
• Do genetic structure and landscape heterogeneity impact color morph frequency in a polymorphic salamander?

  2019cites this paper
• Evolutionary Histories and Futures of the Fishes of the Lake Eyre Basin

  2019cites this paper
• Genetic diversity and demography of the critically endangered Roberts’ false brook salamander (Pseudoeurycea robertsi) in Central Mexico

  2019cites this paper
• Topographic path analysis for modelling dispersal and functional connectivity: Calculating topographic distances using the topoDistance r package

  2019cites this paper
• Sampling related individuals within ponds biases estimates of population structure in a pond‐breeding amphibian

  2019cites this paper
• Biological Connectivity of Seasonally Ponded Wetlands across Spatial and Temporal Scales

  2018cites this paper
• Genomic Data from an Endangered Amphibian Reveal Unforeseen Consequences of Fragmentation by Roads

  2018influential citation
• Climatic suitability, isolation by distance and river resistance explain genetic variation in a Brazilian whiptail lizard

  2018cites this paper
• Impact of Model Violations on the Inference of Species Boundaries Under the Multispecies Coalescent

  2018cites this paper
• Linking genetic and ecological differentiation in an ungulate with a circumpolar distribution

  2018cites this paper
• Population genetic analysis of the recently rediscovered Hula painted frog (Latonia nigriventer) reveals high genetic diversity and low inbreeding

  2018cites this paper
• Genomic data recover previously undetectable fragmentation effects in an endangered amphibian

  2018influential citation
• Gene flow and genetic structure of two of Arkansas’s rarest darter species (Teleostei: Percidae), the Arkansas Darter, Etheostoma cragini, and the Least Darter, E. microperca

  2018cites this paper
• Population genetic and field‐ecological analyses return similar estimates of dispersal over space and time in an endangered amphibian

  2017cites this paper
• Between Hot Rocks and Dry Places: The Status of the Dixie Valley Toad

  2017cites this paper
• Patterns of Genetic Diversity of the White-Nosed Coati Reveals Phylogeographically Structured Subpopulations in Mexico

  2017cites this paper
• Model selection with multiple regression on distance matrices leads to incorrect inferences

  2017cites this paper
• Ecology, environment and evolutionary history influence genetic structure in five mammal species from the Italian Alps

  2016cites this paper
• Navigating the pitfalls and promise of landscape genetics

  2016cites this paper
• Microsatellite markers reveal genetic divergence among wild and cultured populations of Chinese sucker Myxocyprinus asiaticus.

  2016cites this paper
• Survival Estimates for Reintroduced Populations of the Chiricahua Leopard Frog (Lithobates chiricahuensis)

  2016cites this paper
• Genetic structure and diversity in an isolated population of an endemic mole salamander (Ambystoma rivulare Taylor, 1940) of central Mexico

  2016cites this paper
• Correction: Extremely Low Genetic Diversity Indicating the Endangered Status of Ranodon sibiricus (Amphibia: Caudata) and Implications for Phylogeography

  2015cites this paper
• Discordant patterns of genetic and phenotypic differentiation in five grasshopper species codistributed across a microreserve network

  2015cites this paper
• Diversification and asymmetrical gene flow across time and space: lineage sorting and hybridization in polytypic barking frogs

  2014cites this paper
• Physiological vagility and its relationship to dispersal and neutral genetic heterogeneity in vertebrates

  2014cites this paper
• Water cisterns as death traps for amphibians and reptiles in arid environments

  2014cites this paper
• Molecular systematics and phylogeography of Bufotes variabilis ( syn . Pseudepidalea variabilis ) ( Pallas , 1769 ) in Turkey

  2014cites this paper
• Genetic diversity and structure of an endemic and critically endangered stream river salamander (Caudata: Ambystoma leorae) in Mexico

  2013cites this paper
• Métodos de análisis genéticos, espaciales y de conectividad en genética del paisaje Genetic, spatial and connectivity methods of analysis in landscape genetics

  2013cites this paper
• Physiological Vagility: Correlations with Dispersal and Population Genetic Structure of Amphibians*

  2013influential citation
• Elevated genetic structure in the coastal tailed frog (Ascaphus truei) in managed redwood forests.

  2013cites this paper
• Aquatic insects in a sea of desert: population genetic structure is shaped by limited dispersal in a naturally fragmented landscape

  2013influential citation
• New synthetic methodology for construction of the 3,4-dihydroquinolin-2-one skeleton

  2013cites this paper
• Métodos de análisis genéticos, espaciales y de conectividad en genética del paisaje

  2013cites this paper
• EXAMINING THE FULL EFFECTS OF LANDSCAPE HETEROGENEITY ON SPATIAL GENETIC VARIATION: A MULTIPLE MATRIX REGRESSION APPROACH FOR QUANTIFYING GEOGRAPHIC AND ECOLOGICAL ISOLATION

  2013cites this paper
• Correction: Fine-Scale Population Structure of Blue Whale Wintering Aggregations in the Gulf of California

  2013cites this paper
• Fine-Scale Population Structure of Blue Whale Wintering Aggregations in the Gulf of California

  2013cites this paper
• Population structure and gene flow in a heavily disturbed habitat: implications for the management of the imperilled Red Hills salamander (Phaeognathus hubrichti)

  2012influential citation
• Population structure and landscape genetics of two endangered frog species of genus Odorrana: different scenarios on two islands

  2012cites this paper
• Environmental and topographic variables shape genetic structure and effective population sizes in the endangered Yosemite toad

  2012influential citation
• Comparative population genetics of aquatic turtles in the desert

  2012influential citation
• Landscape genetics of a specialized grasshopper inhabiting highly fragmented habitats: a role for spatial scale

  2012cites this paper
• Extremely Low Genetic Diversity Indicating the Endangered Status of Ranodon sibiricus (Amphibia: Caudata) and Implications for Phylogeography

  2012cites this paper
• Indirect Estimates Of Gene Flow And Its Conservation Implications In The Striped Newt (notophthalmus Perstriatus)

  2011influential citation
• Ecogeographical distribution of the herpetofauna of Indio Mountains research station, Hudspeth County, Texas

  2011cites this paper
• Spatial Ecology of the Eastern Hellbender (Cryptobranchus alleganiensis alleganiensis) in Indiana

  2011cites this paper
• Inferring landscape effects on dispersal from genetic distances: how far can we go?

  2011cites this paper
• Genetic analysis of differentiation among breeding ponds reveals a candidate gene for local adaptation in Rana arvalis

  2011cites this paper
• Combining biotic surveys, GIS modeling, and ecological genetics to prioritize land purchases for the conservation of the federally threatened Red Hills salamander (Phaeognathus hubrichti)

  2011cites this paper
• Population structure and genetic diversity of Rana dalmatina in the Iberian Peninsula

  2011influential citation
• Fine‐scale population structure and riverscape genetics of brook trout (Salvelinus fontinalis) distributed continuously along headwater channel networks

  2011cites this paper
• COMPARATIVE ANALYSES OF EFFECTIVE POPULATION SIZE WITHIN AND AMONG SPECIES: RANID FROGS AS A CASE STUDY

  2011cites this paper
• Fine-Scale Analysis Reveals Cryptic Landscape Genetic Structure in Desert Tortoises

  2011cites this paper
• Effective population size is strongly correlated with breeding pond size in the endangered California tiger salamander, Ambystoma californiense

  2011influential citation
• Genetic structure is correlated with phenotypic divergence rather than geographic isolation in the highly polymorphic strawberry poison‐dart frog

  2010cites this paper
• Editorial and retrospective 2010

  2010cites this paper
• Low Genetic Differentiation among Populations of the Great Plains Toad (Bufo cognatus) in Southern New Mexico

  2010cites this paper
• Using Landscape Genetics To Assess Population Connectivity In A Habitat Generalist

  2010cites this paper
• Impact des polluants agricoles sur la génétique des populations d’une espèce sentinelle : le ouaouaron (Rana catesbeiana)

  2010cites this paper
• Discordant patterns of genetic and phenotypic 1 differentiation in five grasshopper species co-distributed 2 across a microreserve network 3 4

  year unknowncites this paper