An empirical analysis of ontology reuse in BioPortal

No abstract is available for this paper.

• Publication year

  2017

• Venue

  Journal of Biomedical Informatics

• Publication date

  2017-07-01

• Fields of study

  Biology, Medicine, Computer Science

• Identifiers
  DOI 10.1016/j.jbi.2017.05.021PMID 28583809PMCID PMC5557647
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• A systematic analysis of term reuse and term overlap across biomedical ontologies

  2017cited by this paper
• A unified software framework for deriving, visualizing, and exploring abstraction networks for ontologies

  2016cited by this paper
• Utilizing a structural meta-ontology for family-based quality assurance of the BioPortal ontologies

  2016cited by this paper
• The protégé project: a look back and a look forward

  2015cited by this paper
• Abstraction networks for terminologies: Supporting management of "big knowledge"

  2015cited by this paper
• Summarizing and visualizing structural changes during the evolution of biomedical ontologies using a Diff Abstraction Network

  2015cited by this paper
• Finding common ground: integrating the eagle-i and VIVO ontologies

  2013cited by this paper
• A Family-Based Framework for Supporting Quality Assurance of Biomedical Ontologies in BioPortal

  2013cited by this paper
• Auditing Redundant Import in Reuse of a Top Level Ontology for the Drug Discovery Investigations Ontology

  2013cited by this paper
• Choosing the Granularity of Abstraction Networks for Orientation and Quality Assurance of the Sleep Domain Ontology

  2013cited by this paper
• An Information Artifact Ontology Perspective on Data Collections and Associated Representational Artifacts

  2012cited by this paper
• Applications of Ontology Design Patterns in Biomedical Ontologies

  2012cited by this paper
• The National Center for Biomedical Ontology

  2012cited by this paper
• Protein interaction sentence detection using multiple semantic kernels

  2011cited by this paper
• A survey of SNOMED CT direct users, 2010: impressions and preferences regarding content and quality

  2011cited by this paper
• How orthogonal are the OBO Foundry ontologies?

  2011cited by this paper
• Mapping between the OBO and OWL ontology languages

  2011cited by this paper
• BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications

  2011cited by this paper
• NanoParticle Ontology for cancer nanotechnology research

  2011cited by this paper
• The BioPortal Import Plugin for Protégé

  2011cited by this paper
• Vital Sign Ontology

  2011cited by this paper
• Proceedings of the Workshop on Bio-Ontologies, ISMB, Vienna, June 2011

  2011cited by this paper
• An Ontology for Description of Drug Discovery Investigations

  2010cited by this paper
• OntoFox: web-based support for ontology reuse

  2010cited by this paper
• The OWL API: A Java API for Working with OWL 2 Ontologies

  2009cited by this paper
• MIREOT: The minimum information to reference an external ontology term

  2009cited by this paper
• A review of auditing methods applied to the content of controlled biomedical terminologies

  2009cited by this paper
• Survey of modular ontology techniques and their applications in the biomedical domain

  2009cited by this paper
• Special Issue on Auditing of Terminologies

  2009cited by this paper
• Modular Reuse of Ontologies: Theory and Practice

  2008cited by this paper
• HermiT: A Highly-Efficient OWL Reasoner

  2008cited by this paper
• OWL 2 Web Ontology Language: structural specification and functional-style syntax

  2008cited by this paper
• FOAF: Connecting People on the Semantic Web

  2007cited by this paper
• Ontology module extraction for ontology reuse: an ontology engineering perspective

  2007cited by this paper
• The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

  2007influential reference
• A Comparison of Upper Ontologies

  2007cited by this paper
• The Manchester OWL Syntax

  2006cited by this paper
• Relations in biomedical ontologies

  2005cited by this paper
• Overview and Utilization of the NCI Thesaurus

  2004cited by this paper
• The Unified Medical Language System (UMLS): integrating biomedical terminology

  2004cited by this paper
• Biodynamic ontology: applying BFO in the biomedical domain.

  2004cited by this paper
• SNOMED clinical terms: overview of the development process and project status

  2001cited by this paper
• Gene Ontology: tool for the unification of biology

  2000cited by this paper

• UCVA ontology: Standardizing local context factors to support the analysis of unwarranted clinical variation.

  2026cites this paper
• An epidemiological knowledge graph extracted from the World Health Organization’s Disease Outbreak News

  2025influential citation
• The Massive Problem of Remote Changes in Ontology Reuse

  2025cites this paper
• The Immunopeptidomics Ontology (ImPO)

  2024cites this paper
• An Extendible Realism-Based Ontology for Kinship

  2024cites this paper
• Integrating Commercial and Social Determinants of Health: A Unified Ontology for Non-Clinical Determinants of Health

  2023cites this paper
• Research on Coronary Heart Disease Knowledge Organization Based on Follow-up Data

  2023cites this paper
• Guidelines for the reuse of ontology content

  2023influential citation
• The Soil Food Web Ontology: aligning trophic groups, processes, resources, and dietary traits to support food-web research

  2023cites this paper
• An Ontology for the Social Determinants of Health Domain

  2022cites this paper
• An Empirical Analysis of Knowledge Overlapping from Big Vocabulary in Biodiversity Domain

  2022cites this paper
• Developing a pneumonia diagnosis ontology from multiple knowledge sources

  2022influential citation
• Response

  2022cites this paper
• Modeling Logical Definitions in Biomedical Ontologies by Reusing Ontology Design Patterns

  2021cites this paper
• Characterising the Gap Between Theory and Practice of Ontology Reuse

  2021cites this paper
• Exploiting Ontology Recommendation Using Text Categorization Approach

  2021cites this paper
• Response.

  2021cites this paper
• A pan-ontology view of machine-derived knowledge representations and feedback mechanisms for curation

  2021cites this paper
• Semantic Standards of External Exposome Data.

  2021cites this paper
• Implementation of FAIR Principles for Ontologies in the Disaster Domain: A Systematic Literature Review

  2021cites this paper
• Traversing

  2020cites this paper
• Apply

  2020cites this paper
• The Landscape of Ontology Reuse Approaches

  2020cites this paper
• A Comparative Analysis of dot NET-Based and Open Source Platforms for Ontologies Development

  2020cites this paper
• Response.

  2019cites this paper
• Why are ontologies not reused across the same domain?

  2019cites this paper
• A Study on the Ontologies Developed Based on the Principles of Open Biomedical Ontologies Foundry

  2019cites this paper
• A Comparative Application of Multi-criteria Decision Making in Ontology Ranking

  2019cites this paper
• Quality assurance of complex ChEBI concepts based on number of relationship types

  2019cites this paper
• PreMedOnto: A Computer Assisted Ontology for Precision Medicine

  2019cites this paper
• A Comparative Application of Multi-criteria Decision Making in Ontology Ranking

  2019cites this paper
• OntoMetrics Evaluation of Quality of e-Government Ontologies

  2019cites this paper
• An Empirical Evaluation of dot NET-Based Tools for OWL/RDF Ontologies Processing

  2019cites this paper
• Competency Questions for Biomedical Ontology Reuse

  2019cites this paper
• Çevik Ontoloji Geliştirme 101: Yeniden Kullanım Tabanlı Çevik Bir Ontoloji Geliştirme Yöntemi

  2019cites this paper
• Biomedical ontologies and their development, management, and applications in and beyond China

  2019cites this paper
• Partitioning of BioPortal Ontologies: An Empirical Study

  2019cites this paper
• A Known in Advance, What Ontologies to Integrate? For Effective Ontology Merging Using K-means Clustering

  2018cites this paper
• OntoM4IS+: Ontology Reuse Method for Information Science

  2018cites this paper
• Enhancing the Representational Power of i2b2 through Referent Tracking

  2018cites this paper
• Ontology of behavior pattern as Web controller from the cloud for energy saving in Smart Home

  2018cites this paper
• ProFUSO: Business process and ontology-based framework to develop ubiquitous computing support systems for chronic patients' management

  2018cites this paper
• Quality Assurance of Ontology Content Reuse

  2018influential citation
• DCO: A Mid Level Generic Data Collection Ontology

  2017cites this paper
• SULO – a simplified upper-level ontology

  year unknowncites this paper