Discovery and characterization of RecA protein of thermophilic bacterium Thermus thermophilus MAT72 phage Tt72 that increases specificity of a PCR-based DNA amplification.

No abstract is available for this paper.

• Publication year

  2014

• Venue

  Journal of Biotechnology

• Publication date

  2014-07-20

• Fields of study

  Biology, Medicine, Chemistry

• Identifiers
  DOI 10.1016/j.jbiotec.2014.04.015PMID 24786823
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Novel Highly Thermostable Endolysin from Thermus scotoductus MAT2119 Bacteriophage Ph2119 with Amino Acid Sequence Similarity to Eukaryotic Peptidoglycan Recognition Proteins

  2013cited by this paper
• Genomic and proteomic characterization of the large Myoviridae bacteriophage ϕTMA of the extreme thermophile Thermus thermophilus

  2011cited by this paper
• Easyfig: a genome comparison visualizer

  2011cited by this paper
• Detection of novel recombinases in bacteriophage genomes unveils Rad52, Rad51 and Gp2.5 remote homologs

  2010cited by this paper
• Classification of Myoviridae bacteriophages using protein sequence similarity

  2009cited by this paper
• M1.MboII and M2.MboII type IIS methyltransferases: different specificities, the same target.

  2009cited by this paper
• Optimization of an E. coli L-rhamnose-inducible expression vector: test of various genetic module combinations

  2008cited by this paper
• Genome comparison and proteomic characterization of Thermus thermophilus bacteriophages P23-45 and P74-26: siphoviruses with triplex-forming sequences and the longest known tails.

  2008cited by this paper
• Thermus thermophilus bacteriophage phiYS40 genome and proteomic characterization of virions.

  2006cited by this paper
• Effective transcriptome amplification for expression profiling on sense-oriented oligonucleotide microarrays

  2005cited by this paper
• Multiplex PCR: use of heat-stable Thermus thermophilus RecA protein to minimize non-specific PCR products

  2005cited by this paper
• JCat: a novel tool to adapt codon usage of a target gene to its potential expression host

  2005cited by this paper
• Specific cleavage of DNA molecules at RecA-mediated triple-strand structure.

  2004cited by this paper
• Multiple uracil-DNA glycosylase activities in Deinococcus radiodurans.

  2004cited by this paper
• PCR-based diagnostics for infectious diseases: uses, limitations, and future applications in acute-care settings

  2004cited by this paper
• The genome sequence of the extreme thermophile Thermus thermophilus

  2004cited by this paper
• The bacterial RecA protein and the recombinational DNA repair of stalled replication forks.

  2002cited by this paper
• Molecular Cloning: A Laboratory Manual

  2001cited by this paper
• Hyperthermophilic Enzymes: Sources, Uses, and Molecular Mechanisms for Thermostability

  2001cited by this paper
• Mediator proteins orchestrate enzyme-ssDNA assembly during T4 recombination-dependent DNA replication and repair

  2001cited by this paper
• Phylogeny of the Major Head and Tail Genes of the Wide-Ranging T4-Type Bacteriophages

  2001cited by this paper
• The question of DNA repair in hyperthermophilic archaea.

  2000cited by this paper
• T-Coffee: A novel method for fast and accurate multiple sequence alignment.

  2000cited by this paper
• Recombination-dependent DNA replication in phage T4.

  2000cited by this paper
• Identification of additional genes belonging to the LexA regulon in Escherichia coli

  2000cited by this paper
• Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda.

  1999cited by this paper
• Recombinational Repair of DNA Damage inEscherichia coli and Bacteriophage λ

  1999cited by this paper
• Thermostable uracil-DNA glycosylase from Thermotoga maritima a member of a novel class of DNA repair enzymes.

  1999cited by this paper
• The Mutagenesis Protein UmuC Is a DNA Polymerase Activated by UmuD′, RecA, and SSB and Is Specialized for Translesion Replication*

  1999cited by this paper
• Quantitative analysis of the kinetics of end-dependent disassembly of RecA filaments from ssDNA.

  1999cited by this paper
• Genomic DNA sequencing by SPEL-6 primer walking using hexamer ligation.

  1998cited by this paper
• RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange.

  1998cited by this paper
• Thermostable archaeal O6-alkylguanine-DNA alkyltransferases.

  1998cited by this paper
• Sequence-specific ligation of DNA using RecA protein.

  1998cited by this paper
• Spontaneous mutation in a thermoacidophilic archaeon: evaluation of genetic and physiological factors

  1997cited by this paper
• Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

  1997cited by this paper
• Repair of extensive ionizing-radiation DNA damage at 95 degrees C in the hyperthermophilic archaeon Pyrococcus furiosus

  1997cited by this paper
• recA mutants of E. coli K12: a personal turning point.

  1996cited by this paper
• Whole genome amplification using a degenerate oligonucleotide primer allows hundreds of genotypes to be performed on less than one nanogram of genomic DNA.

  1996cited by this paper
• Evidence for the Coupling of ATP Hydrolysis to the Final (Extension) Phase of RecA Protein-mediated DNA Strand Exchange (*)

  1996cited by this paper
• UV and Ethyl Methanesulfonate Effects in Hyperthermophilic Archaea and Isolation of Auxotrophic Mutants of Pyrococcus Strains

  1996cited by this paper
• recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae.

  1996cited by this paper
• Evolutionary conservation of RecA genes in relation to protein structure and function

  1996cited by this paper
• Optimization and troubleshooting in PCR.

  1995cited by this paper
• Bacterial classifications derived from recA protein sequence comparisons

  1995cited by this paper
• Biochemistry of homologous recombination in Escherichia coli.

  1994cited by this paper
• CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

  1994cited by this paper
• Functionally important residues at a subunit interface site in the RecA protein from Escherichia coli.

  1994cited by this paper
• A comparison of methods for RNA extraction from lymphocytes for RT-PCR.

  1994cited by this paper
• RecA protein from an extremely thermophilic bacterium, Thermus thermophilus HB8.

  1993cited by this paper
• RecA-like recombination proteins in eukaryotes: functions and structures of RAD51 genes.

  1993cited by this paper
• The structure of the E. coli recA protein monomer and polymer

  1992cited by this paper
• RecA-AC: single-site cleavage of plasmids and chromosomes at any predetermined restriction site.

  1992cited by this paper
• Genetic disease detection and DNA amplification using cloned thermostable ligase.

  1991cited by this paper
• Selective cleavage of human DNA: RecA-assisted restriction endonuclease (RARE) cleavage.

  1991cited by this paper
• Mechanism of specific LexA cleavage: autodigestion and the role of RecA coprotease.

  1991cited by this paper
• PCR protocols — A guide to methods and applications

  1990cited by this paper
• The RecA Protein: Structure and Function

  1990cited by this paper
• The RecA protein: structure and function.

  1990cited by this paper
• RecA protein-dependent cleavage of UmuD protein and SOS mutagenesis.

  1988cited by this paper
• Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

  1988cited by this paper
• Conservation of an ATP-binding domain among RecA proteins from Proteus vulgaris, Erwinia carotovora, Shigella flexneri, and Escherichia coli K-12 and B/r

  1988cited by this paper
• Structure of helical RecA-DNA complexes. Complexes formed in the presence of ATP-gamma-S or ATP.

  1988cited by this paper
• The essential role of recombination in phage T4 growth.

  1987cited by this paper
• Purification and characterization of the T4 bacteriophage uvsX protein.

  1986cited by this paper
• Inducible DNA repair systems.

  1985cited by this paper
• Distantly related sequences in the alpha‐ and beta‐subunits of ATP synthase, myosin, kinases and other ATP‐requiring enzymes and a common nucleotide binding fold.

  1982cited by this paper
• Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Characterization of ATP hydrolysis.

  1981cited by this paper
• recA protein of Escherichia coli promotes branch migration, a kinetically distinct phase of DNA strand exchange.

  1981cited by this paper
• Activity of the Escherichia coli recA-gene product.

  1979cited by this paper
• The deoxyribonucleic acid unwinding protein of Escherichia coli. Properties and functions in replication.

  1975cited by this paper
• Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

  1970cited by this paper
• ISOLATION AND CHARACTERIZATION OF RECOMBINATION-DEFICIENT MUTANTS OF ESCHERICHIA COLI K12.

  1965cited by this paper

• Structure, function, and applications of two novel phage recombinases from extreme environments

  2026cites this paper
• Molecular Characterization of a DNA Polymerase from Thermus thermophilus MAT72 Phage vB_Tt72: A Novel Type-A Family Enzyme with Strong Proofreading Activity

  2022cites this paper
• A systematic method for DNA fragment amplification and sequencing based on DNA indexing technology. Protocol and technical considerations.

  2021cites this paper
• Going to extremes - a metagenomic journey into the dark matter of life.

  2021cites this paper
• Ts2631 Endolysin from the Extremophilic Thermus scotoductus Bacteriophage vB_Tsc2631 as an Antimicrobial Agent against Gram-Negative Multidrug-Resistant Bacteria

  2019cites this paper
• Structure and function of the Ts2631 endolysin of Thermus scotoductus phage vB_Tsc2631 with unique N-terminal extension used for peptidoglycan binding

  2019cites this paper
• Crystal structures of the Bacillus subtilis prophage lytic cassette proteins XepA and YomS

  2019cites this paper
• Quantification of Plasmid Copy Number with Single Colour Droplet Digital PCR

  2017cites this paper
• Mutants de recombinases

  2015cites this paper
• Highly thermostable RadA protein from the archaeon Pyrococcus woesei enhances specificity of simplex and multiplex PCR assays

  2015cites this paper
• Biochemical Characterization and Validation of a Catalytic Site of a Highly Thermostable Ts2631 Endolysin from the Thermus scotoductus Phage vB_Tsc2631

  2015cites this paper