Evaluation of automated techniques for the quantification of grey matter atrophy in patients with multiple sclerosis

No abstract is available for this paper.

• Publication year

  2010

• Venue

  NeuroImage

• Publication date

  2010-10-01

• Fields of study

  Medicine, Computer Science

• Identifiers
  DOI 10.1016/j.neuroimage.2010.05.029PMID 20483380
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Brain volumetry counterparts of cognitive impairment in patients with multiple sclerosis.

  2009cited by this paper
• MRSI evidence for cortical gray matter pathology that is independent of cerebral white matter lesion load in patients with secondary progressive multiple sclerosis

  2009cited by this paper
• Gender-related differences in MS: a study of conventional and nonconventional MRI measures

  2009cited by this paper
• Reducing the effects of white matter lesions on measures of brain grey and white matter volumes

  2009cited by this paper
• A voxel-based morphometry study of grey matter loss in MS patients with different clinical phenotypes

  2008cited by this paper
• Brain atrophy assessment in multiple sclerosis: importance and limitations.

  2008cited by this paper
• Cortical pathology in multiple sclerosis

  2008cited by this paper
• Fully automatic segmentation of multiple sclerosis lesions in brain MR FLAIR images using adaptive mixtures method and markov random field model

  2008cited by this paper
• Magnetization transfer ratio in gray matter: a potential surrogate marker for progression in early primary progressive multiple sclerosis.

  2008cited by this paper
• Lesion distribution in children with clinically isolated syndromes

  2008cited by this paper
• Cross-validation of brain segmentation by SPM5 and SIENAX.

  2008cited by this paper
• Evidence of thalamic gray matter loss in pediatric multiple sclerosis

  2008cited by this paper
• Measuring Brain Atrophy in Multiple Sclerosis

  2007cited by this paper
• Bayesian statistical models of shape and appearance for subcortical brain segmentation

  2007influential reference
• Lack of correlation between cortical demyelination and white matter pathologic changes in multiple sclerosis.

  2007cited by this paper
• Association of neocortical volume changes with cognitive deterioration in relapsing-remitting multiple sclerosis.

  2007cited by this paper
• The measurement and clinical relevance of brain atrophy in multiple sclerosis.

  2006cited by this paper
• Magnetic resonance imaging measures of brain atrophy in multiple sclerosis

  2006cited by this paper
• Neocortical volume decrease in relapsing-remitting multiple sclerosis with mild cognitive impairment.

  2006cited by this paper
• Grey matter loss in relapsing-remitting multiple sclerosis: A voxel-based morphometry study

  2006cited by this paper
• Localization of grey matter atrophy in early RRMS

  2006cited by this paper
• Axonal injury in the cerebral normal-appearing white matter of patients with multiple sclerosis is related to concurrent demyelination in lesions but not to concurrent demyelination in normal-appearing white matter

  2006cited by this paper
• The role of edema and demyelination in chronic T1 black holes: A quantitative magnetization transfer study

  2005cited by this paper
• Unified segmentation

  2005cited by this paper
• The relationship between whole brain volume and disability in multiple sclerosis: A comparison of normalized gray vs. white matter with misclassification correction

  2005cited by this paper
• Cortical demyelination and diffuse white matter injury in multiple sclerosis.

  2005cited by this paper
• Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation

  2004cited by this paper
• Automatically parcellating the human cerebral cortex.

  2004cited by this paper
• Regional variations in normal brain shown by quantitative magnetization transfer imaging

  2004cited by this paper
• Voxel‐based analysis of MTR images: A method to locate gray matter abnormalities in patients at the earliest stage of multiple sclerosis

  2004cited by this paper
• The reproducibility and sensitivity of brain tissue volume measurements derived from an SPM‐based segmentation methodology

  2002cited by this paper
• Fast robust automated brain extraction

  2002cited by this paper
• Neurotechnique Whole Brain Segmentation: Automated Labeling of Neuroanatomical Structures in the Human Brain

  2002cited by this paper
• Brain atrophy in clinically early relapsing-remitting multiple sclerosis.

  2002cited by this paper
• Choline is increased in pre-lesional normal appearing white matter in multiple sclerosis

  2002cited by this paper
• Accurate, Robust, and Automated Longitudinal and Cross-Sectional Brain Change Analysis

  2002cited by this paper
• Transected neurites, apoptotic neurons, and reduced inflammation in cortical multiple sclerosis lesions

  2001cited by this paper
• Automated segmentation of multiple sclerosis lesions by model outlier detection

  2001cited by this paper
• Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm

  2001cited by this paper
• Normalized Accurate Measurement of Longitudinal Brain Change

  2001influential reference
• New variants of a method of MRI scale standardization

  2000cited by this paper
• Voxel-based morphometry--the methods.

  2000cited by this paper
• Progressive cerebral atrophy in MS

  2000cited by this paper
• Progressive cerebral atrophy in MS: A serial study using registered, volumetric MRI

  2000cited by this paper
• Automatic Quantification of MS Lesions in 3D MRI Brain Data Sets: Validation of INSECT

  1998influential reference
• Morphometric analysis of white matter lesions in MR images: method and validation

  1994cited by this paper

• Impact of processing and analysis methodology on thalamic susceptibility assessment in multiple sclerosis

  2025cites this paper
• Methods for Brain Atrophy MR Quantification in Multiple Sclerosis: Application to the Multicenter INNI Dataset

  2023cites this paper
• Age-dependent changes in brain iron deposition and volume in deep gray matter nuclei using quantitative susceptibility mapping

  2023cites this paper
• Recommended Implementation of Quantitative Susceptibility Mapping for Clinical Research in The Brain: A Consensus of the ISMRM Electro-Magnetic Tissue Properties Study Group

  2023cites this paper
• Cortical Grey matter volume depletion links to neurological sequelae in post COVID-19 “long haulers”

  2023cites this paper
• Automated Differentiation of Atypical Parkinsonian Syndromes Using Brain Iron Patterns in Susceptibility Weighted Imaging

  2022cites this paper
• 3D hemisphere-based convolutional neural network for whole-brain MRI segmentation

  2021cites this paper
• Whole brain and deep gray matter structure segmentation: Quantitative comparison between MPRAGE and MP2RAGE sequences

  2021cites this paper
• MRI brain volume loss, lesion burden, and clinical outcome in secondary progressive multiple sclerosis

  2021cites this paper
• Development and evaluation of a manual segmentation protocol for deep grey matter in multiple sclerosis: Towards accelerated semi-automated references

  2021cites this paper
• On the value of QSM from MPRAGE for segmenting and quantifying iron‐rich deep gray matter

  2020cites this paper
• Spatial normalization of multiple sclerosis brain MRI data depends on analysis method and software package.

  2020cites this paper
• Manual and automated tissue segmentation confirm the impact of thalamus atrophy on cognition in multiple sclerosis: A multicenter study.

  2020influential citation
• Gray Matter Matters: A Longitudinal Magnetic Resonance Voxel-Based Morphometry Study of Primary Progressive Multiple Sclerosis

  2020cites this paper
• Reduced accuracy of MRI deep grey matter segmentation in multiple sclerosis: an evaluation of four automated methods against manual reference segmentations in a multi-center cohort

  2020cites this paper
• Decreasing brain iron in multiple sclerosis: The difference between concentration and content in iron MRI

  2020cites this paper
• Stereological Investigation of Regional Brain Volumes after Acute and Chronic Cuprizone-Induced Demyelination

  2019cites this paper
• Prospective Assessment of No Evidence of Disease Activity-4 Status in Early Disease Stages of Multiple Sclerosis in Routine Clinical Practice

  2019cites this paper
• Voxel-based morphometry results in first-episode schizophrenia: a comparison of publicly available software packages

  2019cites this paper
• Five year iron changes in relapsing-remitting multiple sclerosis deep gray matter compared to healthy controls.

  2019cites this paper
• Quantifying deep grey matter atrophy using automated segmentation approaches: A systematic review of structural MRI studies

  2019cites this paper
• Measurement of Whole-Brain and Gray Matter Atrophy in Multiple Sclerosis: Assessment with MR Imaging.

  2018influential citation
• Whole‐brain atrophy assessed by proportional‐ versus registration‐based pipelines from 3T MRI in multiple sclerosis

  2018cites this paper
• Structural and Functional MRI Techniques in Multiple Sclerosis Related Cognitive Dysfunction

  2018cites this paper
• Structural cortical grey matter changes during the transition from premanifest to manifest Huntington's disease : a methodological evaluation

  2018cites this paper
• Reproducibility of Brain MRI Segmentation Algorithms: Empirical Comparison of Local MAP PSTAPLE, FreeSurfer, and FSL‐FIRST

  2018cites this paper
• Fingolimod effect on gray matter, thalamus, and white matter in patients with multiple sclerosis

  2018cites this paper
• Future Brain and Spinal Cord Volumetric Imaging in the Clinic for Monitoring Treatment Response in MS

  2018cites this paper
• Structural and Functional Neuroimaging in Multiple Sclerosis: From Atrophy, Lesions to Global Network Disruption

  2018cites this paper
• SIENA‐XL for improving the assessment of gray and white matter volume changes on brain MRI

  2018cites this paper
• Methods for the computation of templates from quantitative magnetic susceptibility maps (QSM): Toward improved atlas‐ and voxel‐based analyses (VBA)

  2017cites this paper
• Recommendations for the Use of Automated Gray Matter Segmentation Tools: Evidence from Huntington’s Disease

  2017influential citation
• An improved FSL-FIRST pipeline for subcortical gray matter segmentation to study abnormal brain anatomy using quantitative susceptibility mapping (QSM).

  2017cites this paper
• Brain Atrophy in Multiple Sclerosis: Clinical Relevance and Technical Aspects.

  2017cites this paper
• Longitudinal quantitative MRI assessment of cortical damage in multiple sclerosis: A pilot study

  2017cites this paper
• Hippocampal dysfunction is associated with memory impairment in multiple sclerosis: A volumetric and functional connectivity study

  2017cites this paper
• Measurement of Cortical Thickness and Volume of Subcortical Structures in Multiple Sclerosis: Agreement between 2D Spin-Echo and 3D MPRAGE T1-Weighted Images

  2017cites this paper
• Agreement of MSmetrix with established methods for measuring cross-sectional and longitudinal brain atrophy

  2017cites this paper
• Whole-Brain High-Resolution Structural Connectome: Inter-Subject Validation and Application to the Anatomical Segmentation of the Striatum

  2017cites this paper
• Multimodal MEMPRAGE, FLAIR, and R2* Segmentation to Resolve Dura and Vessels from Cortical Gray Matter

  2017cites this paper
• A two-year study using cerebral gray matter volume to assess the response to fingolimod therapy in multiple sclerosis.

  2017cites this paper
• Grey Matter Atrophy in Multiple Sclerosis: Clinical Interpretation Depends on Choice of Analysis Method

  2016cites this paper
• Critical analysis on the present methods for brain volume measurements in multiple sclerosis

  2016cites this paper
• Cortical Damage and Disability in Multiple Sclerosis: Relation to Intracortical Inhibition and Facilitation.

  2016cites this paper
• Intracortical inhibition abnormality during the remission phase of multiple sclerosis is related to upper limb dexterity and lesions.

  2016cites this paper
• Correlates of Executive Functions in Multiple Sclerosis Based on Structural and Functional MR Imaging: Insights from a Multicenter Study.

  2016cites this paper
• Intra- and interscanner variability of magnetic resonance imaging based volumetry in multiple sclerosis

  2016cites this paper
• Postmortem validation of MRI cortical volume measurements in MS

  2016cites this paper
• Grey matter pathology in MS: post mortem imaging, histopathology and molecular studies

  2016cites this paper
• Lesion filling effect in regional brain volume estimations: a study in multiple sclerosis patients with low lesion load

  2016cites this paper
• Multi-channel registration of fractional anisotropy and T1-weighted images in the presence of atrophy: application to multiple sclerosis.

  2015cites this paper
• Non-Local Means Inpainting of MS Lesions in Longitudinal Image Processing

  2015cites this paper
• Subcortical gray matter segmentation and voxel‐based analysis using transverse relaxation and quantitative susceptibility mapping with application to multiple sclerosis

  2015cites this paper
• Parkinson's disease and local atrophy in subcortical nuclei: insight from shape analysis.

  2015cites this paper
• The Prognostic Utility of MRI in Clinically Isolated Syndrome: A Literature Review

  2015cites this paper
• What drives MRI-measured cortical atrophy in multiple sclerosis?

  2015cites this paper
• Evaluation de traitement de la sclérose en plaques par analyses morphométriques de données d'imagerie par résonance magnétique

  2015cites this paper
• Simulation-based partial volume correction for dopaminergic PET imaging: Impact of segmentation accuracy.

  2015cites this paper
• Sub-millimeter imaging of brain-free water for rapid volume assessment in atrophic brains

  2014cites this paper
• Quantification of Global Cerebral Atrophy in Multiple Sclerosis from 3T MRI Using SPM: The Role of Misclassification Errors

  2014cites this paper
• Surface‐based analysis reveals regions of reduced cortical magnetization transfer ratio in patients with multiple sclerosis: A proposed method for imaging subpial demyelination

  2014cites this paper
• Improved longitudinal gray and white matter atrophy assessment via application of a 4-dimensional hidden Markov random field model

  2014cites this paper
• Thalamus pathology in multiple sclerosis: from biology to clinical application

  2014cites this paper
• A white matter lesion-filling approach to improve brain tissue volume measurements

  2014cites this paper
• Changes in functional network centrality underlie cognitive dysfunction and physical disability in multiple sclerosis

  2014cites this paper
• Ventral Striatum, but Not Cortical Volume Loss, Is Related to Cognitive Dysfunction in Type 1 Diabetic Patients With and Without Microangiopathy

  2014cites this paper
• MRI in the Prediction and Diagnosis of Pediatric-onset Multiple Sclerosis: Insights from Children with Incident CNS Demyelination

  2013cites this paper
• Preventing brain atrophy should be the gold standard of effective therapy in multiple sclerosis (after the first year of treatment): Commentary

  2013cites this paper
• A comprehensive approach to the segmentation of multichannel three-dimensional MR brain images in multiple sclerosis☆

  2013influential citation
• Brain atrophy: an in-vivo measure of disease activity in multiple sclerosis.

  2013cites this paper
• Advanced magnetic resonance imaging in pediatric multiple sclerosis.

  2013cites this paper
• Gray Matter Pathology in MS: Neuroimaging and Clinical Correlations

  2013cites this paper
• The Royal Australian and New Zealand College of Radiologists 64th Annual Scientific Meeting

  2013cites this paper
• Recommendations to improve imaging and analysis of brain lesion load and atrophy in longitudinal studies of multiple sclerosis

  2012cites this paper
• Subcortical atrophy and cognition

  2012cites this paper
• Multi‐modal quantitative MRI investigation of brain tissue neurodegeneration in multiple sclerosis

  2012cites this paper
• Measurement and clinical effect of grey matter pathology in multiple sclerosis.

  2012cites this paper
• Subcortical and Cortical Gray Matter Atrophy in a Large Sample of Patients with Clinically Isolated Syndrome and Early Relapsing-Remitting Multiple Sclerosis

  2012cites this paper
• Longitudinal gray matter changes in multiple sclerosis—Differential scanner and overall disease‐related effects

  2012cites this paper
• Human brain atlas-based multimodal MRI analysis of volumetry, diffusimetry, relaxometry and lesion distribution in multiple sclerosis patients and healthy adult controls: implications for understanding the pathogenesis of multiple sclerosis and consolidation of quantitative MRI results in MS.

  2012cites this paper
• Multimodal Quantitative Magnetic Resonance Imaging of Thalamic Development and Aging across the Human Lifespan: Implications to Neurodegeneration in Multiple Sclerosis

  2011cites this paper
• Imaging Effects of Neurotrophic Factor Genes on Brain Plasticity and Repair in Multiple Sclerosis

  2011cites this paper
• A Bayesian model of shape and appearance for subcortical brain segmentation

  2011cites this paper
• Optimal Gaussian Mixture Models of Tissue Intensities in Brain MRI of Patients with Multiple-Sclerosis

  2010cites this paper
• Summary, General Discussion and a Future Perspective Validation Studies

  year unknowncites this paper