The Role of Transposons in Epigenetic Regulation of Ontogenesis

No abstract is available for this paper.

• Publication year

  2018

• Venue

  Russian Journal of Developmental Biology

• Publication date

  2018-03-01

• Fields of study

  Biology

• Identifiers
  DOI 10.1134/S1062360418020066
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• DNA methylation of retrotransposons, DNA transposons and genes in sugar beet (Beta vulgaris L.)

  2017influential reference
• Transposon-mediated epigenetic regulation contributes to phenotypic diversity and environmental adaptation in rice.

  2017cited by this paper
• Widespread of horizontal gene transfer in the human genome

  2017cited by this paper
• Mammalian non-CG methylations are conserved and cell-type specific and may have been involved in the evolution of transposon elements

  2016influential reference
• Expression of human endogenous retrovirus K and W in babies

  2016cited by this paper
• A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation

  2016cited by this paper
• Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells

  2016cited by this paper
• Inducible Transposition of a Heat-Activated Retrotransposon in Tissue Culture

  2016cited by this paper
• Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice

  2015cited by this paper
• Epigenetics of Aging and Alzheimer’s Disease: Implications for Pharmacogenomics and Drug Response

  2015cited by this paper
• The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs

  2015cited by this paper
• Small RNA-mediated DNA (cytosine-5) methyltransferase 1 inhibition leads to aberrant DNA methylation

  2015cited by this paper
• MIR retrotransposon sequences provide insulators to the human genome

  2015influential reference
• Epigenetic regulation of intragenic transposable elements impacts gene transcription in Arabidopsis thaliana

  2015cited by this paper
• Temporal and spatial rearrangements of a repetitive element array on C57BL/6J mouse genome.

  2015influential reference
• A miR-130a-YAP positive feedback loop promotes organ size and tumorigenesis

  2015cited by this paper
• Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials

  2015cited by this paper
• The Role of Transposable Elements in the Origin and Evolution of MicroRNAs in Human

  2015influential reference
• The role of short RNA loops in recognition of a single-hairpin exon derived from a mammalian-wide interspersed repeat

  2015cited by this paper
• MicroRNA-mediated regulation of differentiation and trans-differentiation in stem cells.

  2015cited by this paper
• Detecting Endogenous Retrovirus-Driven Tissue-Specific Gene Transcription

  2015influential reference
• Mammalian-wide interspersed repeat (MIR)-derived enhancers and the regulation of human gene expression

  2014cited by this paper
• Genome-Wide Identification and Classification of MicroRNAs Derived from Repetitive Elements

  2014influential reference
• L1 retrotransposons and somatic mosaicism in the brain.

  2014cited by this paper
• Functions of noncoding sequences in mammalian genomes

  2014cited by this paper
• Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats.

  2014influential reference
• Epigenome-wide analysis of piRNAs in gene-specific DNA methylation

  2014cited by this paper
• The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs

  2014influential reference
• Functional repeat-derived RNAs often originate from retrotransposon-propagated ncRNAs

  2014cited by this paper
• Epigenetics today and tomorrow

  2014cited by this paper
• Functional microRNAs and target sites are created by lineage-specific transposition.

  2014influential reference
• Novel microRNA families expanded in the human genome

  2013influential reference
• Continuing analysis of microRNA origins

  2013influential reference
• MicroRNAs in age-related diseases

  2013cited by this paper
• miR-29 Represses the Activities of DNA Methyltransferases and DNA Demethylases

  2013cited by this paper
• Genomic and Epigenomic Cross-talks in the Regulatory Landscape of miRNAs in Breast Cancer

  2013influential reference
• The Intertwining of Transposable Elements and Non-Coding RNAs

  2013influential reference
• Age-dependent and tissue-specific structural changes in the C57BL/6J mouse genome.

  2012influential reference
• ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins

  2012influential reference
• Splice Variants of NaV1.7 Sodium Channels Have Distinct β Subunit-Dependent Biophysical Properties

  2012cited by this paper
• The microRNA miR-34 modulates aging and neurodegeneration in Drosophila

  2012cited by this paper
• The let-7–Imp axis regulates ageing of the Drosophila testis stem-cell niche

  2012cited by this paper
• MiR-25 Regulates Wwp2 and Fbxw7 and Promotes Reprogramming of Mouse Fibroblast Cells to iPSCs

  2012cited by this paper
• Reprogramming somatic cells into iPS cells activates LINE-1 retroelement mobility.

  2012cited by this paper
• Intragenic long interspersed element-1 sequences promote promoter hypermethylation in lung adenocarcinoma, multiple myeloma and prostate cancer

  2012cited by this paper
• The role of Transposable Elements in shaping the combinatorial interaction of Transcription Factors

  2012cited by this paper
• Human transposon tectonics.

  2012cited by this paper
• Origins and Evolution of MicroRNA Genes in Plant Species

  2012influential reference
• Hydrogen Peroxide Alters Splicing of Soluble Guanylyl Cyclase and Selectively Modulates Expression of Splicing Regulators in Human Cancer Cells

  2012cited by this paper
• Alternative transcription and alternative splicing in cancer.

  2012cited by this paper
• From ancestral infectious retroviruses to bona fide cellular genes: role of the captured syncytins in placentation.

  2012cited by this paper
• Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation

  2012influential reference
• Mutation in a primate-conserved retrotransposon reveals a noncoding RNA as a mediator of infantile encephalopathy

  2012cited by this paper
• Transposon-Derived and Satellite-Derived Repetitive Sequences Play Distinct Functional Roles in Mammalian Intron Size Expansion

  2012cited by this paper
• OrbId: Origin-based identification of microRNA targets.

  2012influential reference
• Evolutionarily recent groups of transposable elements in the human genome

  2011cited by this paper
• Impact of Alu repeats on the evolution of human p53 binding sites

  2011cited by this paper
• In Utero Exposure

  2011cited by this paper
• Transposable elements: Instability of genes and genomes

  2011cited by this paper
• Analysis of the tissue- and stage-specific transportation of the Drosophila melanogaster gypsy retrotransposon

  2011influential reference
• Long interspersed nuclear element-1 hypomethylation in cancer: biology and clinical applications

  2011cited by this paper
• Comprehensive analysis of microRNA genomic loci identifies pervasive repetitive-element origins

  2011influential reference
• MicroRNA Genes Derived from Repetitive Elements and Expanded by Segmental Duplication Events in Mammalian Genomes

  2011influential reference
• Repetitive Elements May Comprise Over Two-Thirds of the Human Genome

  2011cited by this paper
• Functional consequences of developmentally regulated alternative splicing

  2011cited by this paper
• Retrotransposons: Mobile and mutagenic from conception to death

  2011influential reference
• Complete genome and comparative analysis of Streptococcus gallolyticus subsp. gallolyticus, an emerging pathogen of infective endocarditis

  2011cited by this paper
• Location analysis for the estrogen receptor-α reveals binding to diverse ERE sequences and widespread binding within repetitive DNA elements

  2010cited by this paper
• Epigenetic Control of Retrotransposon Expression in Human Embryonic Stem Cells

  2010cited by this paper
• Origin and evolution of a placental-specific microRNA family in the human genome

  2010cited by this paper
• Origins and Evolution of MicroRNA Genes in Drosophila Species

  2010influential reference
• The dynamic architecture of the metabolic switch in Streptomyces coelicolor

  2010cited by this paper
• Transposon identification using profile HMMs

  2010cited by this paper
• All y'all need to know 'bout retroelements in cancer.

  2010cited by this paper
• The evolutionary consequences of erroneous protein synthesis

  2009cited by this paper
• L1 retrotransposition in human neural progenitor cells

  2009cited by this paper
• Marsupial-specific microRNAs evolved from marsupial-specific transposable elements.

  2009influential reference
• Transposable elements and the evolution of regulatory networks

  2008influential reference
• The contribution of transposable elements to the evolution of regulatory networks

  2008influential reference
• Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA

  2008cited by this paper
• Origin and Evolution of Human microRNAs From Transposable Elements

  2007influential reference
• LINE-1 retrotransposition in human embryonic stem cells.

  2007cited by this paper
• Mutagenesis induced by integration processes and evolution of nuclear genome

  2007influential reference
• L1 retrotransposition can occur early in human embryonic development.

  2007cited by this paper
• A Family of Human MicroRNA Genes from Miniature Inverted-Repeat Transposable Elements

  2007influential reference
• Functional noncoding sequences derived from SINEs in the mammalian genome.

  2006cited by this paper
• L1 retrotransposition in nondividing and primary human somatic cells.

  2006cited by this paper
• Analysis of distribution of mobile genetic elements within the human TP53 gene and its 5'-flanking region

  2006cited by this paper
• Cell Divisions Are Required for L1 Retrotransposition

  2006cited by this paper
• Mammalian microRNAs derived from genomic repeats.

  2005influential reference
• Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition

  2005influential reference
• A highly active synthetic mammalian retrotransposon

  2004cited by this paper
• Distinct Mechanisms Determine Transposon Inheritance and Methylation via Small Interfering RNA and Histone Modification

  2003cited by this paper
• Tracking an embryonic L1 retrotransposition event

  2003influential reference
• A mouse model of human L1 retrotransposition

  2002cited by this paper
• DNA repair mediated by endonuclease-independent LINE-1 retrotransposition

  2002cited by this paper
• A transient assay reveals that cultured human cells can accommodate multiple LINE-1 retrotransposition events.

  2000cited by this paper
• Rapid amplification of a retrotransposon subfamily is evolving the mouse genome

  1998cited by this paper
• High frequency retrotransposition in cultured mammalian cells.

  1996cited by this paper
• The significance of responses of the genome to challenge.

  1984cited by this paper

• A hypothesis about interrelations of epigenetic factors and transposable elements in memory formation

  2024cites this paper
• The Role of Transposable Elements in Long-Term Memory Formation

  2024cites this paper
• InpactorDB: A Classified Lineage-Level Plant LTR Retrotransposon Reference Library for Free-Alignment Methods Based on Machine Learning

  2021cites this paper
• K-mer-based machine learning method to classify LTR-retrotransposons in plant genomes

  2021cites this paper
• Measuring Performance Metrics of Machine Learning Algorithms for Detecting and Classifying Transposable Elements

  2020cites this paper
• Involvement of transposable elements in neurogenesis

  2020cites this paper
• A systematic review of the application of machine learning in the detection and classification of transposable elements

  2019cites this paper
• Epigenetics of Aggressive Behavior

  2019cites this paper
• Retrotransposons in Plant Genomes: Structure, Identification, and Classification through Bioinformatics and Machine Learning

  2019cites this paper
• Functional Dualism of Transposon Transcripts in Evolution of Eukaryotic Genomes

  2018cites this paper