Meta-analysis based on control of false discovery rate: combining yeast ChIP-chip datasets

No abstract is available for this paper.

• Publication year

  2006

• Venue

  Bioinform.

• Publication date

  2006-09-29

• Fields of study

  Biology, Medicine, Computer Science

• Identifiers
  DOI 10.1093/BIOINFORMATICS/BTL439PMID 16908499
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Statistical Methods for Meta‐Analysis

  2008cited by this paper
• Stepup procedures for control of generalizations of the familywise error rate

  2006cited by this paper
• Generalizations of the familywise error rate

  2005cited by this paper
• Meta-analysis of microarray data on pancreatic cancer defines a set of commonly dysregulated genes

  2005cited by this paper
• The Cell Cycle–Regulated Genes of Schizosaccharomyces pombe

  2005cited by this paper
• Meta‐Analysis of Linkage Studies for Complex Diseases: An Overview of Methods and a Simulation Study

  2004cited by this paper
• Controlling the number of false discoveries: application to high-dimensional genomic data

  2004influential reference
• A stochastic process approach to false discovery control

  2004cited by this paper
• Transcriptional regulatory code of a eukaryotic genome

  2004cited by this paper
• Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression.

  2004cited by this paper
• Statistical significance for genomewide studies

  2003influential reference
• A Stochastic Process Approach to False Discovery Rates

  2003cited by this paper
• Combining multiple microarray studies and modeling interstudy variation

  2003cited by this paper
• Rank truncated product of P‐values, with application to genomewide association scans

  2003cited by this paper
• Comparison and meta-analysis of microarray data: from the bench to the computer desk.

  2003cited by this paper
• Multiple Hypothesis Testing in Microarray Experiments

  2003cited by this paper
• Operating characteristics and extensions of the false discovery rate procedure

  2002cited by this paper
• A direct approach to false discovery rates

  2002cited by this paper
• Supporting online material for : Transcriptional Regulatory Networks in Saccharomyces cerevisiae

  2002cited by this paper
• Truncated product method for combining P‐values

  2002influential reference
• Transcriptional Regulatory Networks in Saccharomyces cerevisiae

  2002cited by this paper
• Meta-analysis of microarrays: interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer.

  2002cited by this paper
• Operating Characteristics and Extensions of the FDR Procedure

  2001cited by this paper
• Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

  2001influential reference
• Approximations for trimmed Fisher procedures in research synthesis

  2001cited by this paper
• Serial regulation of transcriptional regulators in the yeast cell cycle.

  2001influential reference
• Combining independent p values: extensions of the Stouffer and binomial methods.

  2000cited by this paper
• Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization.

  1998cited by this paper
• Methods and Statistics for Combining Motif Match Scores

  1998cited by this paper
• The Handbook of Research Synthesis

  1995cited by this paper
• Controlling the false discovery rate: a practical and powerful approach to multiple testing

  1995cited by this paper
• Combining significance levels.

  1994cited by this paper
• The Handbook of Research Synthesis

  1994cited by this paper
• On the distribution of the weighted combination of independent probabilities

  1992cited by this paper
• Statistical Inference

  1990cited by this paper
• Meta-analytic procedures for social research

  1984cited by this paper
• Rectangular Confidence Regions for the Means of Multivariate Normal Distributions

  1967cited by this paper
• On the Weighted Combination of Significance Tests

  1955cited by this paper
• Statistical Methods for Research Workers

  1937cited by this paper

• Screening for Partial Conjunction Hypotheses Author ( s ) :

  2018cites this paper
• Evolving Genomics of Pulmonary Fibrosis

  2018cites this paper
• Weighted Meta-Analysis for Small Sample Microarray Studies

  2017cites this paper
• Dependency and truncated forms of combinations in multivariate combination-based permutation tests and ordered categorical variables

  2016cites this paper
• False discovery control in large‐scale spatial multiple testing

  2015cites this paper
• Statistical Significance Assessment for Biological Feature Selection: Methods and Issues

  2013cites this paper
• Exact statistical tests for the intersection of independent lists of genes.

  2012cites this paper
• Exact statistical tests for the intersection of independent lists of genes.

  2012cites this paper
• Refining comparative proteomics by spectral counting to account for shared peptides and multiple search engines

  2012cites this paper
• Cellular arrays for large‐scale analysis of transcription factor activity

  2011cites this paper
• An Empirical Bayes' Approach to Joint Analysis of Multiple Microarray Gene Expression Studies

  2011cites this paper
• Multiple Testing for Pattern Identification, With Applications to Microarray Time-Course Experiments

  2011cites this paper
• Simultaneous set-wise testing under dependence, with applications to genome-wide association studies

  2010cites this paper
• Statistical analysis of high dimensional data

  2010cites this paper
• Imipramine Treatment and Resiliency Exhibit Similar Chromatin Regulation in the Mouse Nucleus Accumbens in Depression Models

  2009cites this paper
• ImipramineTreatmentandResiliencyExhibitSimilar ChromatinRegulationintheMouseNucleusAccumbensin DepressionModels

  2009cites this paper
• ChIPping away at gene regulation

  2008influential citation
• A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments

  2008cites this paper
• False Discovery Rate and Asymptotics

  2008cites this paper
• Epigenetic silencers are enriched in dormant desert frog muscle

  2008cites this paper
• Screening for Partial Conjunction Hypotheses

  2008influential citation
• Dissection of beef quality phenotypes using a myogenin network-anchored systems biology approach

  2008cites this paper