Mechanism of NH4(+) Recruitment and NH3 Transport in Rh Proteins.

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Structure

• Publication date

  2015-08-04

• Fields of study

  Biology, Medicine, Chemistry

• Identifiers
  DOI 10.1016/j.str.2015.06.010PMID 26190573
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Ammonia transport in the kidney by Rhesus glycoproteins.

  2014cited by this paper
• Direct observation of electrogenic NH4+ transport in ammonium transport (Amt) proteins

  2014cited by this paper
• Different hydration patterns in the pores of AmtB and RhCG could determine their transport mechanisms.

  2013cited by this paper
• A Toolkit for the Analysis of Free-Energy Perturbation Calculations.

  2012cited by this paper
• Thermodynamics of transport through the ammonium transporter Amt-1 investigated with free energy calculations.

  2012cited by this paper
• Ammonium transporters achieve charge transfer by fragmenting their substrate.

  2012cited by this paper
• Substrate specificity of Rhbg: ammonium and methyl ammonium transport.

  2010cited by this paper
• Functional Reconstitution into Liposomes of Purified Human RhCG Ammonia Channel

  2010cited by this paper
• Potentials of mean force and permeabilities for carbon dioxide, ammonia, and water flux across a Rhesus protein channel and lipid membranes.

  2010cited by this paper
• Function of human Rh based on structure of RhCG at 2.1 Å

  2010cited by this paper
• CHARMM: The biomolecular simulation program

  2009cited by this paper
• Functional analysis of human RhCG: comparison with E. coli ammonium transporter reveals similarities in the pore and differences in the vestibule.

  2009cited by this paper
• CHARMM‐GUI: A web‐based graphical user interface for CHARMM

  2008cited by this paper
• Protein-protein docking with backbone flexibility.

  2007cited by this paper
• The 1.3-Å resolution structure of Nitrosomonas europaea Rh50 and mechanistic implications for NH3 transport by Rhesus family proteins

  2007cited by this paper
• Single-sweep methods for free energy calculations.

  2007cited by this paper
• Structural and mechanistic aspects of Amt/Rh proteins.

  2007cited by this paper
• On the equivalence point for ammonium (de)protonation during its transport through the AmtB channel.

  2007cited by this paper
• Parallel folding pathways in the SH3 domain protein.

  2007cited by this paper
• Molecular dynamics simulations on the Escherichia coli ammonia channel protein AmtB: mechanism of ammonia/ammonium transport.

  2006cited by this paper
• Structural involvement in substrate recognition of an essential aspartate residue conserved in Mep/Amt and Rh-type ammonium transporters

  2006cited by this paper
• Computational study of the binding affinity and selectivity of the bacterial ammonium transporter AmtB.

  2006cited by this paper
• Ammonium recruitment and ammonia transport by E. coli ammonia channel AmtB.

  2006cited by this paper
• Crystal structure of the archaeal ammonium transporter Amt-1 from Archaeoglobus fulgidus.

  2005cited by this paper
• In vivo functional characterization of the Escherichia coli ammonium channel AmtB: evidence for metabolic coupling of AmtB to glutamine synthetase.

  2005cited by this paper
• Scalable molecular dynamics with NAMD

  2005cited by this paper
• Expression of the human erythroid Rh glycoprotein (RhAG) enhances both NH3 and NH4+ transport in HeLa cells

  2005cited by this paper
• Characteristics of renal Rhbg as an NH4(+) transporter.

  2005cited by this paper
• An Efficient Real Space Multigrid QM/MM Electrostatic Coupling.

  2005cited by this paper
• Electroneutral ammonium transport by basolateral rhesus B glycoprotein

  2004cited by this paper
• NH3 is involved in the NH4+ transport induced by the functional expression of the human Rh C glycoprotein.

  2004cited by this paper
• Human Rhesus-associated glycoprotein mediates facilitated transport of NH(3) into red blood cells.

  2004cited by this paper
• The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli.

  2004cited by this paper
• Ammonium Sensing in Escherichia coli

  2004cited by this paper
• Overcoming free energy barriers using unconstrained molecular dynamics simulations.

  2004cited by this paper
• Mechanism of Ammonia Transport by Amt/MEP/Rh: Structure of AmtB at 1.35 Å

  2004cited by this paper
• The Rh complex exports ammonium from human red blood cells

  2003cited by this paper
• Uniport of NH 4 + by the Root Hair Plasma Membrane Ammonium Transporter LeAMT1;1*

  2002cited by this paper
• Extension to the weighted histogram analysis method: combining umbrella sampling with free energy calculations

  2001cited by this paper
• Calculating free energies using average force

  2001cited by this paper
• All-atom empirical potential for molecular modeling and dynamics studies of proteins.

  1998cited by this paper
• Copyright © 1997, American Society for Microbiology A Family of Ammonium Transporters in

  1997cited by this paper
• Functional and Genetic Characterization of the (Methyl)ammonium Uptake Carrier of Corynebacterium glutamicum(*)

  1996cited by this paper
• VMD: visual molecular dynamics.

  1996cited by this paper
• A smooth particle mesh Ewald method

  1995cited by this paper
• Identification of a high affinity NH4+ transporter from plants.

  1994cited by this paper

• High-resolution structure of proIAPP(1–48) fibrils suggests a mechanistic pathway for diabetes-associated IAPP fibril polymorphs

  2025cites this paper
• Controlled corrosion behaviors of copper in oxidizer solutions for chemical mechanical polishing: Influence of the decomposition products

  2024cites this paper
• Chloride Gradient Is Involved in Ammonium Influx in Human Erythrocytes

  2024cites this paper
• How sensor Amt-like proteins integrate ammonium signals

  2024cites this paper
• Branchial CO2 and ammonia excretion in crustaceans: Involvement of an apical Rhesus‐like glycoprotein

  2024cites this paper
• Biological ammonium transporters from the Amt/Mep/Rh superfamily: mechanism, energetics, and technical limitations

  2023cites this paper
• SpiAMT1d: molecular characterization, localization, and potential role in coral calcification of an ammonium transporter in Stylophora pistillata

  2022cites this paper
• A Rhesus channel in the coral symbiosome membrane suggests a novel mechanism to regulate NH3 and CO2 delivery to algal symbionts

  2022influential citation
• TRPV3 and TRPV4 as candidate proteins for intestinal ammonium absorption

  2021cites this paper
• Ammonia Stress Coping Strategy in a Highly Invasive Ascidian

  2021influential citation
• A novel nitrogen concentrating mechanism in the coral-algae symbiosome

  2021influential citation
• Nutrient Limitation Causes Differential Expression of Transport- and Metabolism Genes in the Compartmentalized Anammox Bacterium Kuenenia stuttgartiensis

  2020cites this paper
• Ions before oxygen : ancestral origins of vertebrate gill function

  2020cites this paper
• Free energy calculation using space filled design and weighted reconstruction: a modified single sweep approach

  2020cites this paper
• Development of Aedes aegypti (Diptera: Culicidae) mosquito larvae in high ammonia sewage in septic tanks causes alterations in ammonia excretion, ammonia transporter expression, and osmoregulation

  2019cites this paper
• Ammonium transceptors: Novel regulators of fungal development

  2019cites this paper
• Structural Articulation of Biochemical Reactions Using Restrained Geometries and Topology Switching

  2018cites this paper
• Evidence that Rh proteins in the anal papillae of the freshwater mosquito Aedes aegypti are involved in the regulation of acid–base balance in elevated salt and ammonia environments

  2018cites this paper
• Section-specific expression of acid-base and ammonia transporters in the kidney tubules of the goldfish Carassius auratus and their responses to feeding.

  2018cites this paper
• Nonclinical and human pharmacology of the potent and selective topical retinoic acid receptor‐γ agonist trifarotene

  2018cites this paper
• Ammonia Excretion in an Osmoregulatory Syncytium Is Facilitated by AeAmt2, a Novel Ammonia Transporter in Aedes aegypti Larvae

  2018cites this paper
• Cation-π Interactions between Quaternary Ammonium Ions and Amino Acid Aromatic Groups in Aqueous Solution.

  2018cites this paper
• Aedes aegypti Rhesus glycoproteins contribute to ammonia excretion by larval anal papillae

  2017cites this paper
• Ammonia exposure affects the mRNA and protein expression levels of certain Rhesus glycoproteins in the gills of climbing perch

  2017cites this paper
• Phylogenetic, structural, and functional characterization of AMT3;1, an ammonium transporter induced by mycorrhization among model grasses

  2017cites this paper
• Molecular characterization of three Rhesus glycoproteins from the gills of the African lungfish, Protopterus annectens, and effects of aestivation on their mRNA expression levels and protein abundance

  2017cites this paper
• Molecular characterization of two Rhesus glycoproteins from the euryhaline freshwater white-rimmed stingray, Himantura signifer, and changes in their transcript levels and protein abundance in the gills, kidney, and liver during brackish water acclimation

  2017cites this paper
• The efficacy and short-term effects of electronic cigarettes as a method for smoking cessation: a systematic review and a meta-analysis

  2016cites this paper
• Molecular Dynamics and Free Energy Simulations of Phenylacetate and CO2 Release from AMDase and Its G74C/C188S Mutant: A Possible Rationale for the Reduced Activity of the Latter.

  2016cites this paper
• Different transport behaviors of NH4+ and NH3 in transmembrane cyclic peptide nanotubes

  2016cites this paper