Site-specific discrimination of Cytosine and 5-methylcytosine in duplex DNA by Peptide nucleic acids.

No abstract is available for this paper.

• Publication year

  2002

• Venue

  Journal of the American Chemical Society

• Publication date

  2002-09-04

• Fields of study

  Biology, Medicine, Chemistry

• Identifiers
  DOI 10.1021/JA0264955PMID 12197712
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Hybridization of DNA and PNA molecular beacons to single-stranded and double-stranded DNA targets.

  2002cited by this paper
• DNA methylation and epigenetic inheritance in plants and filamentous fungi.

  2001cited by this paper
• Gene silencing and DNA methylation processes.

  2001cited by this paper
• The Role of DNA Methylation in Mammalian Epigenetics

  2001cited by this paper
• Homology-dependent gene silencing mechanisms in fungi.

  2001cited by this paper
• Kinetics of DNA cleavage by Fe(II).bleomycins.

  2001cited by this paper
• DNA methylation, methyltransferases, and cancer

  2001cited by this paper
• Inactivation of the DNA-repair gene MGMT and the clinical response of gliomas to alkylating agents.

  2000cited by this paper
• An experimental study of mechanism and specificity of peptide nucleic acid (PNA) binding to duplex DNA.

  1999cited by this paper
• PD-loop: a complex of duplex DNA with an oligonucleotide.

  1998cited by this paper
• Cooperative strand displacement by peptide nucleic acid (PNA).

  1998cited by this paper
• Enhancement of strand invasion by oligonucleotides through manipulation of backbone charge

  1996cited by this paper
• Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.

  1996cited by this paper
• Complete and tissue-independent methylation of CpG sites in the p53 gene: implications for mutations in human cancers.

  1995cited by this paper
• A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands.

  1992cited by this paper
• Cleavage of methylated CCCGGG sequences containing either N4-methylcytosine or 5-methylcytosine with MspI, HpaII, SmaI, XmaI and Cfr9I restriction endonucleases.

  1987cited by this paper
• In-vivo-modified gonococcal plasmid pJD1. A model system for analysis of restriction enzyme sensitivity to DNA modifications.

  1986cited by this paper
• Genomic sequencing.

  1984cited by this paper
• 5-Methylcytosine in eukaryotic DNA.

  1981cited by this paper

• Detection of Epigenetically Important 5-Formylcytosine Modifications Using Novel Photoreactive Oligonucleotides Containing a Trioxsalen-Conjugated Guanosine.

  2026cites this paper
• Selective Photo-Crosslinking Detection of Methylated Cytosine in DNA Duplex Aided by a Cationic Comb-Type Copolymer.

  2022cites this paper
• Detection Methods of Cytosine and Thymine Modifications in DNA

  2020cites this paper
• Electrochemical Sensing of Cancer‐related Global and Locus‐specific DNA Methylation Events

  2018cites this paper
• Methods for detection of cytosine and thymine modifications in DNA

  2018cites this paper
• References

  2017cites this paper
• Optical probes and sensors as perspective tools in epigenetics.

  2017cites this paper
• The Epigenetics of Pluripotency in Embryonic Stem Cells

  2015cites this paper
• Direct potential resolution and simultaneous detection of cytosine and 5-methylcytosine based on the construction of polypyrrole functionalized graphene nanowall interface

  2015cites this paper
• Highly selective N-allylation of anilines under microwave irradiation

  2014cites this paper
• The interactions between an aza-cyclic cerium (III) complex and pUC19 DNA

  2014cites this paper
• Novel Photodynamic Effect of a Psoralen‐Conjugated Oligonucleotide for the Discrimination of the Methylation of Cytosine in DNA

  2014cites this paper
• The prediction of methylation states in human DNA sequences based on hexanucleotide composition and feature selection

  2014cites this paper
• Electrochemical evaluation of DNA methylation level based on the stoichiometric relationship between purine and pyrimidine bases.

  2013cites this paper
• The supramolecular assemblies of 7-amino-2,4-dimethylquinolinium salts and the effect of a variety of anions on their luminescent properties

  2012cites this paper
• Prediction of methylation CpGs and their methylation degrees in human DNA sequences

  2012cites this paper
• Picomolar level profiling of the methylation status of the p53 tumor suppressor gene by a label-free electrochemical biosensor.

  2012cites this paper
• ICON Probes: Synthesis and DNA Methylation Typing

  2011cites this paper
• On-Chip DNA Methylation Analysis Using Osmium Complexation

  2011cites this paper
• Phosphopeptides designed for 5-methylcytosine recognition.

  2011cites this paper
• Review: Advances in methodology of DNA methylation assay

  2011cites this paper
• Predicting methylation status of human DNA sequences by pseudo-trinucleotide composition.

  2011cites this paper
• Crystal and molecular structure of adduct of 6-benzylaminopurine and 5-sulfosalicylic acid

  2010cites this paper
• Roles of Metal Ions in Controlling Bioinspired Electron‐Transfer Systems. Metal Ion‐Coupled Electron Transfer

  2009cites this paper
• Chemical approach toward efficient DNA methylation analysis.

  2009cites this paper
• Luminescence-based colorimetric discrimination of single-nucleotide transversions by the combined use of the derivatives of DOTA-conjugated naphthyridine and its terbium complex

  2009cites this paper
• Fluorometric identification of 5-methylcytosine modification in DNA: combination of photosensitized oxidation and invasive cleavage.

  2008cites this paper
• The pH effect on the naphthoquinone-photosensitized oxidation of 5-methylcytosine.

  2008cites this paper
• Photocurrent response after enzymatic treatment of DNA duplexes immobilized on gold electrodes: electrochemical discrimination of 5-methylcytosine modification in DNA.

  2008cites this paper
• One-electron photooxidation and site-selective strand cleavage at 5-methylcytosine in DNA by sensitization with 2-methyl-1,4-naphthoquinone-tethered oligonucleotides.

  2007cites this paper
• An osmium-DNA interstrand complex: application to facile DNA methylation analysis.

  2007cites this paper
• Direct labeling of 5-methylcytosine and its applications.

  2007cites this paper
• Targeting linear duplex DNA with mixed-base peptide nucleic acid oligomers facilitated by bisPNA openers.

  2007cites this paper
• 5-Methylcytosine-Selective Osmium Oxidation

  2007cites this paper
• Ferrocene-Peptide Bioconjugates

  2006cites this paper
• [The action mechanism of 8-azaadenine and its metal complexes with DNA].

  2006cites this paper
• Sequence-selective osmium oxidation of DNA: efficient distinction between 5-methylcytosine and cytosine.

  2006cites this paper
• Cleavage at 5-methylcytosine in DNA by photosensitized oxidation with 2-methyl-1,4-naphthoquinone tethered oligodeoxynucleotides.

  2005cites this paper
• Synthesis of Highly Functional Nucleic Acids and Their Application to DNA Technology

  2005cites this paper
• Enhanced oligonucleotide binding to self-assembled nanofibers.

  2005cites this paper
• Two sides of the coin: affinity and specificity of nucleic acid interactions.

  2004cites this paper
• Artificial site-specific DNA-nicking system based on common restriction enzyme assisted by PNA openers.

  2003cites this paper
• PNA and LNA throw light on DNA.

  2003cites this paper
• Design of Functionalized Peptide Nucleic Acids and the Applications to Gene Detection and Photochemistry

  2003cites this paper
• A cyclopentane conformational restraint for a peptide nucleic acid: design, asymmetric synthesis, and improved binding affinity to DNA and RNA.

  2003cites this paper
• P-loop catalytically assisting the enzymatic cleavage of single-stranded DNA.

  2003cites this paper