This paper proposes an algorithm for alignment-free sequence comparison using Logical Match. Here, we compute the score using fuzzy membership values which generate automatically from the number of matches and mismatches. We demonstrate the method with both the artificial and real datum. The results show the uniqueness of the method by analyzing DNA sequences taken from NCBI databank.
An Algorithm for alignment-free sequence comparison using Logical Match
KP SanilShanker,E. Sherly,J. Austin
Published 2010 in International Conference on Computer and Automation Engineering
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- Publication year
2010
- Venue
International Conference on Computer and Automation Engineering
- Publication date
2010-04-19
- Fields of study
Biology, Computer Science
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