Genomic Approaches Reveal Unexpected Genetic Divergence Within Ciona intestinalis

No abstract is available for this paper.

• Publication year

  2005

• Venue

  Journal of Molecular Evolution

• Publication date

  2005-10-04

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1007/s00239-005-0009-3PMID 16205978
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Phylogenetic Analysis of Ciona intestinalis Gene Superfamilies Supports the Hypothesis of Successive Gene Expansions

  2004cited by this paper
• A Sea Under Siege – Alien Species in the Mediterranean

  2004cited by this paper
• Ciona intestinalis: an emerging model for whole-genome analyses.

  2003cited by this paper
• The ascidian tadpole larva: comparative molecular development and genomics

  2003cited by this paper
• An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks.

  2002cited by this paper
• Using the fossil record to estimate the age of the last common ancestor of extant primates

  2002cited by this paper
• The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

  2002cited by this paper
• The ascidian as a model organism in developmental and evolutionary biology.

  2001cited by this paper
• Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees.

  2001cited by this paper
• Genetic Relatedness and Variability in Inbred and Wild Populations of the Solitary Ascidian Ciona intestinalis Revealed by Arbitrarily Primed Polymerase Chain Reaction

  2001cited by this paper
• Sequence analysis of transposable elements in the sea squirt, Ciona intestinalis.

  2000influential reference
• Nonmethylated transposable elements and methylated genes in a chordate genome.

  1999influential reference
• Species Diversity and Invasion Resistance in a Marine Ecosystem.

  1999cited by this paper
• Gene number in an invertebrate chordate, Ciona intestinalis.

  1998influential reference
• Non-native Marine Species in British Waters: A Review and Directory

  1997cited by this paper
• Cryptic invasions of the crab Carcinus detected by molecular phylogeography

  1997cited by this paper
• Methylation of genomes and genes at the invertebrate-vertebrate boundary

  1997cited by this paper
• Chasing tails in ascidians: developmental insights into the origin and evolution of chordates.

  1995cited by this paper
• Introduced marine and estuarine mollusks of North America: an end-of-the-20th-century perspective

  1992cited by this paper
• Preliminary note on the genetic isolation of Ciona species (Ascidiacea, Urochordata)

  1990cited by this paper
• Taxonomic Studies of Ciona intestinalis (L.) and Its Allies

  1985influential reference
• The neutral theory of molecular evolution.

  1983cited by this paper

• A broad‐taxa approach as an important concept in ecotoxicological studies and pollution monitoring

  2023cites this paper
• Co-expression network analysis of environmental canalization in the ascidian Ciona

  2022cites this paper
• Ecological Review of the Ciona Species Complex

  2022influential citation
• Ciona intestinalis (sea vase)

  2022cites this paper
• Genetic analyses reveal cryptic diversity in the widely distributed Styela canopus (Ascidiacea : Styelidae)

  2021cites this paper
• Chromosomal Inversion Polymorphisms in Two Sympatric Ascidian Lineages

  2021cites this paper
• Cellular remodeling and JAK inhibition promote zygotic gene expression in the Ciona germline

  2021cites this paper
• Assessing Cryptic Invasion State: Fine-Scale Genetic Analysis of Ciona savignyi Population in Putative Native Habitat of the Korean Coast

  2020cites this paper
• Asymmetric second-generation genomic incompatibility in interspecific crosses between Ciona robusta and Ciona intestinalis

  2020influential citation
• Inferring Tunicate Relationships and the Evolution of the Tunicate Hox Cluster with the Genome of Corella inflata

  2020cites this paper
• An integrative taxonomic framework for the study of the genus Ciona (Ascidiacea) and description of a new species, Ciona intermedia

  2020cites this paper
• Asymmetric Fitness of Second-Generation Interspecific Hybrids Between Ciona robusta and Ciona intestinalis

  2020cites this paper
• DNA bar coding of Aplousobranchiata and Phlebobranchiata Ascidians (Phylum:Chordata) inferred from mitochondrial cytochrome oxidase subunit I (COI) gene sequence approach in Andaman and Nicobar Islands, India: a first report

  2020cites this paper
• The power of combined molecular and morphological analyses for the genus Botrylloides: identification of a potentially global invasive ascidian and description of a new species

  2019cites this paper
• Molecular and evolutionary aspects of the protochordate digestive system

  2019cites this paper
• A Framework for Understanding Marine Cosmopolitanism in the Anthropocene

  2018cites this paper
• Coupling molecular data and experimental crosses sheds light about species delineation: a case study with the genus Ciona

  2018cites this paper
• Microinjection of Exogenous Nucleic Acids into Eggs: Ciona Species.

  2018cites this paper
• Aplousobranchia ascidians in Andaman and Nicobar Islands: a combined morphological and molecular discrimination

  2018cites this paper
• The Inflammatory Response of Urochordata: The Basic Process of the Ascidians’ Innate Immunity

  2018cites this paper
• Effects of Temperature and Salinity on the Egg Development and Larval Settlement of Ciona robusta (Ascidiacea, Phlebobranchia, Cionidae)

  2018cites this paper
• Oceanographic barriers to gene flow promote genetic subdivision of the tunicate Ciona intestinalis in a North Sea archipelago

  2018cites this paper
• Chaperones, Canalization, and Evolution of Animal Forms

  2018cites this paper
• Lower vertebrate and invertebrate models of Alzheimer's disease – A review

  2017cites this paper
• Étude de la diversité neutre et adaptative chez l'anémone de mer symbiotique Anemonia viridis : apport de techniques de type Next-Generation Sequencing dans les questions de délimitation d’espèces et d’adaptation locale

  2017cites this paper
• The sea cucumber genome provides insights into morphological evolution and visceral regeneration

  2017cites this paper
• An unprecedented taxonomic revision of a model organism: the paradigmatic case of Ciona robusta and Ciona intestinalis

  2017cites this paper
• Introgression in two species of broadcast spawning marine invertebrate

  2017cites this paper
• Unsupervised detection of regulatory gene expression information in different genomic regions enables gene expression ranking

  2017cites this paper
• Genome Composition Plasticity in Marine Organisms

  2016cites this paper
• Contrasting global genetic patterns in two biologically similar, widespread and invasive Ciona species (Tunicata, Ascidiacea)

  2016cites this paper
• Co-occurrence and reproductive synchrony do not ensure hybridization between an alien tunicate and its interfertile native congener

  2016cites this paper
• Do settlement dynamics influence competitive interactions between an alien tunicate and its native congener?

  2016cites this paper
• Past and contemporary introgression between two strongly

  2016cites this paper
• Anthropogenic transport of species across native ranges: unpredictable genetic and evolutionary consequences

  2016cites this paper
• Comparative morpho-physiological analysis between Ciona robusta and Ciona savignyi

  2016cites this paper
• Dynamique éco-évolutive de deux ascidies congénériques et interfertiles, l'une indigène et l'autre introduite, dans leur zone de sympatrie

  2015influential citation
• Species are hypotheses: avoid connectivity assessments based on pillars of sand

  2015cites this paper
• Distinguishing contemporary hybridization from past introgression with post-genomic ancestry-informative SNPs in strongly differentiated Ciona species

  2015cites this paper
• Mutation studies in ascidians: A review

  2015cites this paper
• Combining environmental suitability and population abundances to evaluate the invasive potential of the tunicate Ciona intestinalis along the temperate South American coast

  2015cites this paper
• Maternal and zygotic transcriptomes in the appendicularian, Oikopleura dioica: novel protein-encoding genes, intra-species sequence variations, and trans-spliced RNA leader

  2015influential citation
• Past and contemporary introgression between two strongly differentiated Ciona species as revealed by a post-genomic SNPs panel

  2015cites this paper
• Morphological Differences between Larvae of the Ciona intestinalis Species Complex: Hints for a Valid Taxonomic Definition of Distinct Species

  2015influential citation
• Effects of substrate material on marine fouling community composition and ascidian larval settlement

  2015cites this paper
• Morphological evidence that the molecularly determined Ciona intestinalis type A and type B are different species: Ciona robusta and Ciona intestinalis

  2015influential citation
• Long-term demographic and reproductive trends inCiona intestinalissp. A

  2015cites this paper
• Development of a transcription factor database useful for developmental biology, and decoding the maternal and zygotic transcriptome of the appendicularian, Oikopleura dioica

  2015cites this paper
• Barrières au flux génique en Méditerranée Occidentale : étude de la différenciation génétique chez deux mollusques marins, Mytilus galloprovincialis & Stramonita haemastoma,

  2015cites this paper
• Molecular basis of canalization in an ascidian species complex adapted to different thermal conditions

  2015cites this paper
• Symmetrical Reproductive Compatibility of Two Species in the Ciona intestinalis (Ascidiacea) Species Complex, a Model for Marine Genomics and Developmental Biology

  2014influential citation
• Morphological and molecular identification of an introduced alien sea squirt (Tunicata: Ascidiacea) in Korea

  2014cites this paper
• Ascidian Mitogenomics: Comparison of Evolutionary Rates in Closely Related Taxa Provides Evidence of Ongoing Speciation Events

  2014cites this paper
• Crossing the species barrier: genomic hotspots of introgression between two highly divergent Ciona intestinalis species.

  2013cites this paper
• between two highly divergent Ciona intestinalis species

  2013cites this paper
• Genetic and Genomic Toolbox of the Chordate Ciona intestinalis

  2012cites this paper
• Asymmetric Divergence in Structure and Function of HCN Channel Duplicates in Ciona intestinalis

  2012cites this paper
• Field identification of ‘types’ A and B of the ascidian Ciona intestinalis in a region of sympatry

  2012cites this paper
• Blood system formation in the urochordate Ciona intestinalis requires the variable receptor vCRL1.

  2012cites this paper
• Field identification of ‘types’ A and B of the ascidian Ciona intestinalis in a region of sympatry

  2012cites this paper
• INTROGRESSION DESPITE SUBSTANTIAL DIVERGENCE IN A BROADCAST SPAWNING MARINE INVERTEBRATE

  2011influential citation
• Antimicrobial peptides from marine invertebrates: challenges and perspectives in marine antimicrobial peptide discovery.

  2011cites this paper
• A New Animal Model for Merging Ecology and Evolution

  2011influential citation
• Reproductive protein evolution in two cryptic species of marine chordate

  2011cites this paper
• Comparative genome analyses of deuterostomes: Metabolism and base composities of tunicates, fish and mammals genomes

  2011cites this paper
• The proteomic response of sea squirts (genus Ciona congeners) to heat stress: Evidence for differential thermal sensitivities

  2011influential citation
• Ciona genetics.

  2011cites this paper
• Invasion genetics of the Ciona intestinalis species complex: from regional endemism to global homogeneity

  2010cites this paper
• Polymorphism and divergence within the ascidian genus Ciona.

  2010cites this paper
• Prediction of tissue-specific cis-regulatory sequences: application to the ascidian Ciona intestinalis and the anterior neurectoderm. (Prédiction des séquences cis-regulatrices tissu-spécifiques: application à l'ascidie Ciona intestinalis et au neurectoderme antérieur)

  2009cites this paper
• How Fast Is the Sessile Ciona?

  2009cites this paper
• Differences in Associated Crustacean Fauna and Seasonality of Sexual Reproduction between Two Color Morphs of the Photosymbiotic Ascidian Didemnum molle (Ascidiacea: Didemnidae)1

  2008cites this paper
• A reverse search for antimicrobial peptides in Ciona intestinalis: identification of a gene family expressed in hemocytes and evaluation of activity.

  2008cites this paper
• An exceptional salt-tolerant antimicrobial peptide derived from a novel gene family of haemocytes of the marine invertebrate Ciona intestinalis.

  2008cites this paper
• Natural Variation of Model Mutant Phenotypes in Ciona intestinalis

  2008cites this paper
• SNPs and Hox gene mapping in Ciona intestinalis

  2008cites this paper
• CpG methylation is targeted to transcription units in an invertebrate genome.

  2007cites this paper
• Genealogical relationships within and among shallow-water Ciona species (Ascidiacea)

  2007influential citation
• Cryptic speciation in a model invertebrate chordate

  2007cites this paper
• Identification and characterization of sea squirt telomerase reverse transcriptase.

  2007cites this paper
• Initial stage of genetic mapping in Ciona intestinalis

  2007influential citation
• Mitogenomics reveals two cryptic species in Ciona intestinalis.

  2007cites this paper
• Phylogenetic analysis of the tenascin gene family: evidence of origin early in the chordate lineage

  2006cites this paper
• Adaptive introgression in the context of climate adaptation

  year unknowncites this paper