The mitochondrial ribosomal RNA genes of the nematodes Caenorhabditis elegans and Ascaris suum: Consensus secondary-structure models and conserved nucleotide sets for phylogenetic analysis

No abstract is available for this paper.

• Publication year

  1994

• Venue

  Journal of Molecular Evolution

• Publication date

  1994-12-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1007/BF00160405PMID 7528811
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• The mitochondrial DNA molecule ofDrosophila yakuba: Nucleotide sequence, gene organization, and genetic code

  2005cited by this paper
• Drosophila mitochondrial DNA: Conserved sequences in the A+T-rich region and supporting evidence for a secondary structure model of the small ribosomal RNA

  2005cited by this paper
• Property and efficiency of the maximum likelihood method for molecular phylogeny

  2005cited by this paper
• Robustness of maximum likelihood tree estimation against different patterns of base substitutions

  2005cited by this paper
• Tempo and mode of sequence evolution in mitochondrial DNA of HawaiianDrosophila

  2005cited by this paper
• Mitochondrial DNA sequences of primates: Tempo and mode of evolution

  2005cited by this paper
• The evolutionary relationships among known life forms

  2005cited by this paper
• Nucleotide correlations that suggest tertiary interactions in the TV-replacement loop-containing mitochondrial tRNAs of the nematodes, Caenorhabditis elegans and Ascaris suum.

  1994cited by this paper
• tRNA‐rRNA interactions and peptidyl transferase

  1993influential reference
• A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993

  1993cited by this paper
• The mitochondrial genome of the honeybee Apis mellifera: complete sequence and genome organization.

  1993cited by this paper
• Collection of small subunit (16S- and 16S-like) ribosomal RNA structures

  1993cited by this paper
• Comparison between the complete mtDNA sequences of the blue and the fin whale, two species that can hybridize in nature

  1993cited by this paper
• The nucleotide sequence of the mitochondrial DNA molecule of the grey seal, Halichoerus grypus, and a comparison with mitochondrial sequences of other true seals

  1993cited by this paper
• Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994.

  1993cited by this paper
• Animal mitochondrial DNA: structure and evolution.

  1992cited by this paper
• The complete mitochondrial DNA sequence of the harbor seal, Phoca vitulina

  1992cited by this paper
• The mitochondrial genomes of two nematodes, Caenorhabditis elegans and Ascaris suum.

  1992cited by this paper
• A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993.

  1992cited by this paper
• The complete nucleotide sequence of the Crossostoma lacustre mitochondrial genome: conservation and variations among vertebrates.

  1992cited by this paper
• The complete nucleotide sequence of the mitochondrial DNA of the fin whale,Balaenoptera physalus

  1991cited by this paper
• Compilation of small ribosomal subunit RNA sequences.

  1991cited by this paper
• Sites of interaction of the CCA end of peptidyl-tRNA with 23S rRNA.

  1991cited by this paper
• On the maximum likelihood method in molecular phylogenetics

  1991cited by this paper
• Mode and tempo of molecular evolution in the nematode caenorhabditis: cytochrome oxidase II and calmodulin sequences.

  1991cited by this paper
• Strand-specific nucleotide composition bias in echinoderm and vertebrate mitochondrial genomes

  1991cited by this paper
• Compilation of small ribosomal subunit RNA sequences.

  1990cited by this paper
• Sequence and gene organization of the chicken mitochondrial genome. A novel gene order in higher vertebrates.

  1990cited by this paper
• Evidence for the frequent use of TTG as the translation initiation codon of mitochondrial protein genes in the nematodes, Ascaris suum and Caenorhabditis elegans.

  1990influential reference
• Nucleotide sequence and gene organization of sea urchin mitochondrial DNA.

  1990cited by this paper
• A set of tRNAs that lack either the T psi C arm or the dihydrouridine arm: towards a minimal tRNA adaptor.

  1990cited by this paper
• Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

  1990influential reference
• The complete nucleotide sequence of theRattus norvegicus mitochondrial genome: Cryptic signals revealed by comparative analysis between vertebrates

  1989cited by this paper
• The complete nucleotide sequence, gene organization, and genetic code of the mitochondrial genome of Paracentrotus lividus.

  1989cited by this paper
• Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites.

  1989cited by this paper
• Platyhelminth mitochondrial DNA: Evidence for early evolutionary origin of a tRNAserAGN that contains a dihydrouridine arm replacement loop, and of serine-specifying AGA and AGG codons

  1989cited by this paper
• The functional role of ribosomal RNA in protein synthesis.

  1989cited by this paper
• A compilation of large subunit RNA sequences presented in a structural format.

  1988cited by this paper
• Compilation of small ribosomal subunit RNA sequences.

  1988cited by this paper
• A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin.

  1988cited by this paper
• Model for the three-dimensional folding of 16 S ribosomal RNA.

  1988cited by this paper
• A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit.

  1988cited by this paper
• Interaction of antibiotics with functional sites in 16S ribosomal RNA

  1987cited by this paper
• Bizarre tRNAs inferred from DNA sequences of mitochondrial genomes of nematode worms.

  1987cited by this paper
• Higher order structure in ribosomal RNA.

  1986cited by this paper
• Studies on the Structure and Function of Ribosomal RNA

  1986cited by this paper
• A comparison of the small ribosomal RNA genes from the mitochondrial DNA of the great apes and humans: sequence, structure, evolution, and phylogenetic implications.

  1986cited by this paper
• The ribosomal RNA genes of Drosophila mitochondrial DNA.

  1985influential reference
• The complete nucleotide sequence of the Xenopus laevis mitochondrial genome.

  1985cited by this paper
• Comparative anatomy of 16-S-like ribosomal RNA.

  1985cited by this paper
• Paramecium mitochondrial genes. I. Small subunit rRNA gene sequence and microevolution.

  1984cited by this paper
• Paramecium mitochondrial genes. II. Large subunit rRNA gene sequence and microevolution.

  1984cited by this paper
• On the evolutionary descent of organisms and organelles: a global phylogeny based on a highly conserved structural core in small subunit ribosomal RNA.

  1984influential reference
• Drosophila melanogaster mitochondrial DNA, a novel organization and genetic code

  1983cited by this paper
• A model for the tertiary structure of mammalian mitochondrial transfer RNAs lacking the entire ‘dihydrouridine’ loop and stem.

  1983cited by this paper
• Complete DNA sequence coding for the large ribosomal RNA of yeast mitochondria.

  1983cited by this paper
• Genes for cytochrome c oxidase subunit I, URF2, and three tRNAs in Drosophila mitochondrial DNA.

  1983cited by this paper
• Drosophila melanogaster mitochondrial DNA, a novel organization and genetic code

  1983cited by this paper
• Transfer RNA genes in Drosophila mitochondrial DNA: related 5' flanking sequences and comparisons to mammalian mitochondrial tRNA genes.

  1983cited by this paper
• Drosophila melanogaster mitochondrial DNA, a novel organization and genetic code

  1983cited by this paper
• Identification of the paromomycin-resistance mutation in the 15 S rRNA gene of yeast mitochondria.

  1982cited by this paper
• Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome.

  1982cited by this paper
• Sequence and organization of the human mitochondrial genome

  1981cited by this paper
• Secondary structure comparisons between small subunit ribosomal RNA molecules from six different species.

  1981cited by this paper
• Secondary structure of the large subunit ribosomal RNA from Escherichia coli, Zea mays chloroplast, and human and mouse mitochondrial ribosomes.

  1981cited by this paper
• Sequence and gene organization of mouse mitochondrial DNA.

  1981cited by this paper
• A general secondary-structure model for procaryotic and eucaryotic RNAs from the small ribosomal subunits.

  1981cited by this paper
• Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli.

  1980cited by this paper
• The nucleotide sequence of a small (3S) seryl-tRNA (anticodon GCU) from beef heart mitochondria.

  1980cited by this paper
• A mammalian mitochondrial serine transfer RNA lacking the "dihydrouridine" loop and stem.

  1980cited by this paper
• Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

  1978cited by this paper
• Life on earth

  1973cited by this paper

• Mitochondrial genome annotation with MFannot: a critical analysis of gene identification and gene model prediction

  2023cites this paper
• Adaptation of the Romanomermis culicivorax CCA-Adding Enzyme to Miniaturized Armless tRNA Substrates

  2020cites this paper
• The plastid genome in Cladophorales green algae is encoded by hairpin plasmids

  2017cites this paper
• Phylogenetic analysis of two Plectus mitochondrial genomes (Nematoda: Plectida) supports a sister group relationship between Plectida and Rhabditida within Chromadorea.

  2017cites this paper
• Structure, function and evolution of armless mitochondrial tRNAs

  2016cites this paper
• The complete mitochondrial genome of Koerneria sudhausi (Diplogasteromorpha: Nematoda) supports monophyly of Diplogasteromorpha within Rhabditomorpha

  2015cites this paper
• The Complete Mitochondrial Genome of Meloidogyne graminicola (Tylenchina): A Unique Gene Arrangement and Its Phylogenetic Implications

  2014cites this paper
• The complete mitochondrial genome of Aphelenchoides besseyi (Nematoda: Aphelenchoididae), the first sequenced representative of the subfamily Aphelenchoidinae

  2014cites this paper
• Complete Mitochondrial Genomes of Chimpanzee- and Gibbon-Derived Ascaris Isolated from a Zoological Garden in Southwest China

  2013cites this paper
• The complete mitochondrial genome sequence of the filarial nematode Wuchereria bancrofti from three geographic isolates provides evidence of complex demographic history.

  2012cites this paper
• The Mitochondrial Genome of Baylisascaris procyonis

  2011cites this paper
• Plant-parasitic nematodes: from genomics to functional analysis of parasitism genes

  2009cites this paper
• A unique genetic code change in the mitochondrial genome of the parasitic nematode Radopholus similis

  2009cites this paper
• Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species

  2008cites this paper
• T‐armless tRNAs and elongated elongation factor Tu

  2007cites this paper
• The mitochondrial genome of Priapulus caudatus Lamarck (Priapulida: Priapulidae).

  2007cites this paper
• The Complete Mitochondrial Genome of the Entomopathogenic Nematode Steinernema carpocapsae: Insights into Nematode Mitochondrial DNA Evolution and Phylogeny

  2006cites this paper
• Complete nucleotide sequence of the mitochondrial genome of Doliolum nationalis with implications for evolution of urochordates.

  2005cites this paper
• Isolation and physiochemical properties of protein-rich nematode mitochondrial ribosomes.

  2005cites this paper
• Nematoda: genes, genomes and the evolution of parasitism.

  2003cites this paper
• Phylogenetic analyses among octocorals (Cnidaria): mitochondrial and nuclear DNA sequences (lsu-rRNA, 16S and ssu-rRNA, 18S) support two convergent clades of branching gorgonians.

  2003cites this paper
• Molecular identification of natural hybrids between Trichinella nativa and Trichinella T6 provides evidence of gene flow and ongoing genetic divergence.

  2003cites this paper
• Chapter 2 : Heterogeneities in macroparasite infections : patterns and processes 1

  2002cites this paper
• The complete mitochondrial DNA sequence of the cestode Echinococcus multilocularis (Cyclophyllidea: Taeniidae).

  2002cites this paper
• The mitochondrial genomes of the human hookworms, Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea).

  2002cites this paper
• Molecular prospecting for cryptic species of nematodes: mitochondrial DNA versus internal transcribed spacer.

  2002cites this paper
• Complete DNA sequence and gene organization of the mitochondrial genome of the liverfluke, Fasciola hepatica L. (Platyhelminthes; Trematoda)

  2001cites this paper
• Mitochondrial DNA variation in benzimidazole-resistant and -susceptible populations of the small ruminant parasite Teladorsagia circumcincta.

  2001cites this paper
• Trichinella spiralis mtDNA: a nematode mitochondrial genome that encodes a putative ATP8 and normally structured tRNAS and has a gene arrangement relatable to those of coelomate metazoans.

  2001cites this paper
• The filarial genome project: analysis of the nuclear, mitochondrial and endosymbiont genomes of Brugia malayi.

  2000cites this paper
• Mitochondrial DNA of Hydra attenuata (Cnidaria): A Sequence That Includes an End of One Linear Molecule and the Genes for l-rRNA, tRNAf-Met, tRNATrp, COII, and ATPase8

  2000cites this paper
• Phylogenetic analysis of partial mitochondrial cytochrome oxidase c subunit I and large ribosomal RNA sequences and nuclear internal transcribed spacer I sequences from species of Cyathostominae and Strongylinae (Nematoda, Order Strongylida), parasites of the horse

  2000cites this paper
• Mitochondrial genes of Schistosoma mansoni

  1999cites this paper
• Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochordata).

  1999cites this paper
• Population biology of parasitic nematodes: applications of genetic markers.

  1998cites this paper
• The mitochondrial genome of the sea anemone Metridium senile (Cnidaria): introns, a paucity of tRNA genes, and a near-standard genetic code.

  1998cites this paper
• The mitochondrial genome of Onchocerca volvulus: sequence, structure and phylogenetic analysis.

  1998cites this paper
• Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics.

  1998cites this paper
• Comparison of the complete protein sets of worm and yeast: orthology and divergence.

  1998cites this paper
• RNA editing missing in mitochondria.

  1997cites this paper
• Evolution of the AT-rich mitochondrial DNA of the root knot nematode, Meloidogyne hapla.

  1997cites this paper
• Molecular evolution of a portion of the mitochondrial 16S ribosomal gene region in scleractinian corals

  1997influential citation
• Cytochrome c oxidase sequence comparisons suggest an unusually high rate of mitochondrial DNA evolution in Mytilus (Mollusca: Bivalvia)

  1996cites this paper
• The sequence and structure of the meadow grasshopper (Chorthippus parallelus) mitochondrial srRNA, ND2, COl, COll ATPase8 and 9 tRNA genes

  1996cites this paper
• Partial sequence of the shrimp Penaeus notialis mitochondrial genome.

  1996cites this paper
• Taenia crassiceps: cloning and mapping of mitochondrial DNA and its application to the phenetic analysis of a new species of Taenia from Southeast Asia.

  1995cites this paper
• Host movement and the genetic structure of populations of parasitic nematodes.

  1995cites this paper
• Sequence and structural characterization of the spliced leader genes and transcripts in Phytomonas.

  1995cites this paper
• Complete DNA Sequence of the Mitochondrial Genome of the Ascidian (cid:72)(cid:97)(cid:108)(cid:111)(cid:99)(cid:121)(cid:110)(cid:116)(cid:104)(cid:105)(cid:97)

  year unknowncites this paper