Single-nucleotide polymorphism-based differentiation and drug resistance detection in Mycobacterium tuberculosis from isolates or directly from sputum.

No abstract is available for this paper.

• Publication year

  2005

• Venue

  Clinical Microbiology and Infection

• Publication date

  2005-02-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1111/J.1469-0691.2004.01034.XPMID 15679486
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• A new high-throughput AFLP approach for identification of new genetic polymorphism in the genome of the clonal microorganism Mycobacterium tuberculosis.

  2004cited by this paper
• A real-time PCR assay for detection of isoniazid resistance in Mycobacterium tuberculosis clinical isolates.

  2003cited by this paper
• Detection of katG Ser315Thr substitution in respiratory specimens from patients with isoniazid-resistant Mycobacterium tuberculosis using PCR-RFLP.

  2003cited by this paper
• PCR-Based Method To Differentiate the Subspecies of the Mycobacterium tuberculosis Complex on the Basis of Genomic Deletions

  2003cited by this paper
• Single Nucleotide Polymorphisms in Genes Associated with Isoniazid Resistance in Mycobacterium tuberculosis

  2003cited by this paper
• Direct Detection of Multidrug-Resistant Mycobacterium tuberculosis in Clinical Specimens in Low- and High-Incidence Countries by Line Probe Assay

  2003cited by this paper
• Novel Polymorphic Region of the rpoB Gene Containing Mycobacterium Species-Specific Sequences and Its Use in Identification of Mycobacteria

  2003cited by this paper
• Genome-wide analysis of synonymous single nucleotide polymorphisms in Mycobacterium tuberculosis complex organisms: resolution of genetic relationships among closely related microbial strains.

  2002cited by this paper
• Current medical treatment for tuberculosis

  2002cited by this paper
• Rapid Differentiation of “Mycobacterium canettii” from Other Mycobacterium tuberculosis Complex Organisms by PCR-Restriction Analysis of the hsp65 Gene

  2001cited by this paper
• The Susceptibility of Mycobacterium tuberculosis to Isoniazid and the Arg→Leu Mutation at Codon 463 of katG Are Not Associated

  2001cited by this paper
• The molecular basis of resistance to isoniazid, rifampin, and pyrazinamide in Mycobacterium tuberculosis

  2001cited by this paper
• Differentiation of Phylogenetically Related Slowly Growing Mycobacteria by Their gyrB Sequences

  2000cited by this paper
• Genotypic Analysis of Mycobacterium tuberculosis in Two Distinct Populations Using Molecular Beacons: Implications for Rapid Susceptibility Testing

  2000cited by this paper
• Mutations at amino acid position 315 of the katG gene are associated with high-level resistance to isoniazid, other drug resistance, and successful transmission of Mycobacterium tuberculosis in the Netherlands.

  2000cited by this paper
• Clusters of new tuberculosis cases in North-west London: a survey from three hospitals based on IS6110 RFLP typing.

  2000cited by this paper
• Molecular determinants of drug resistance in tuberculosis.

  2000cited by this paper
• Differentiation of Clinical Mycobacterium tuberculosis Complex Isolates by gyrB DNA Sequence Polymorphism Analysis

  2000cited by this paper
• Characterization of the rnpB gene and RNase P RNA in the order Chlamydiales.

  2000cited by this paper
• Drug susceptibility testing of Mycobacterium tuberculosis: a neglected problem at the turn of the century.

  1999cited by this paper
• Comparison of Methods Based on Different Molecular Epidemiological Markers for Typing of Mycobacterium tuberculosis Complex Strains: Interlaboratory Study of Discriminatory Power and Reproducibility

  1999cited by this paper
• Analyses of secondary structures in DNA by pyrosequencing.

  1999cited by this paper
• Molecular genetic basis of antimicrobial agent resistance in Mycobacterium tuberculosis: 1998 update.

  1998cited by this paper
• Drug-resistant tuberculosis in Budapest.

  1998cited by this paper
• Molecular analysis of katG gene mutations in strains of Mycobacterium tuberculosis complex from Africa

  1997cited by this paper
• Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination.

  1997cited by this paper
• Rapid identification of a point mutation of the Mycobacterium tuberculosis catalase-peroxidase (katG) gene associated with isoniazid resistance.

  1995cited by this paper
• The catalase—peroxidase gene and isoniazid resistance of Mycobacterium tuberculosis

  1992cited by this paper
• Differentiation of Mycobacterium species by direct sequencing of amplified DNA.

  1990cited by this paper

• Nonequilibrium hybridization-driven CRISPR/Cas adapter with extended energetic penalty for discrimination of single-nucleotide variants

  2025cites this paper
• Learning from Classic: DNA-Based Conditional Equilibrium Constant To Regulate Affinity "On-the-Fly" for Bioassays.

  2024cites this paper
• Recent advances in single-nucleotide variant assay: from in vitro detection to in vivo imaging

  2024cites this paper
• Targeted next-generation sequencing to diagnose drug-resistant tuberculosis: a systematic review and meta-analysis.

  2024cites this paper
• Simulation-Guided Rational Design of DNA Probe for Accurate Discrimination of Single-Nucleotide Variants Based on "Hill-Type" Cooperativity.

  2023cites this paper
• Pyrosequencing for diagnosis of multidrug and extensively drug-resistant tuberculosis: A systemic review and meta-analysis

  2021cites this paper
• Accurate Identification of Closely Related Mycobacterium tuberculosis Complex Species by High Resolution Tandem Mass Spectrometry

  2021cites this paper
• Allosteric DNA molecular beacons: Using a novel mechanism to develop universal biosensor arrays to fully discriminate DNA/RNA analogues

  2020cites this paper
• The tough process of unmasking the slow-growing mycobacterium: case report of Mycobacterium microti infection

  2019cites this paper
• Nucleotide Excision Repair Pathway in Mycobacteria

  2019cites this paper
• Detección de mutaciones en rpoB relacionadas a rifampicina-resistencia en aislamientos clínicos de Mycobacterium tuberculosis a través de un ensayo simple y de bajo costo basado en High Resolution Melting Analysis

  2019cites this paper
• 7 – Ear, Nose, and Throat Infections

  2018cites this paper
• IS6110 FAFLP PCR, a tool for genomic mapping enabling investigation of evolutionary relationships of Mycobacterium tuberculosis in resource poor settings

  2018cites this paper
• Sequence analysis of the rifampicin resistance determining region (RRDR) of rpoB gene in multidrug resistance confirmed and newly diagnosed tuberculosis patients of Punjab, Pakistan

  2017cites this paper
• New carbohydrate derivatives as tools to bind and metabolically label strains of the Mycobacterium tuberculosis complex

  2017cites this paper
• Bacterial Genotypic Drug Resistance Assays

  2017cites this paper
• Molecular detection of Isoniazid, Rifampin and Ethambutol resistance to M. tuberculosis and M. bovis in multidrug resistant tuberculosis (MDR-TB) patients in Pakistan.

  2017cites this paper
• Diagnostics and Resistance Profiling of Bacterial Pathogens.

  2016cites this paper
• Diverse drug-resistant subpopulations of Mycobacterium tuberculosis are sustained in continuous culture

  2016cites this paper
• The influence of growth conditions on the susceptibility of Mycobacterium tuberculosis to antibiotics

  2016cites this paper
• Functional “Janus” Annulus in Confined Channels

  2016cites this paper
• Detection of Drug-Resistant Mycobacterium tuberculosis.

  2015cites this paper
• Assays and Tools for Biomolecular Analysis in Remote and Low-Resource Settings

  2015cites this paper
• Application of Pyrosequencing® in Food Biodefense.

  2015cites this paper
• Mycobacterium tuberculosis Is Resistant to Isoniazid at a Slow Growth Rate by Single Nucleotide Polymorphisms in katG Codon Ser315

  2015cites this paper
• Pyrosequencing for rapid detection of Mycobacterium tuberculosis second-line drugs and ethambutol resistance.

  2015cites this paper
• Computational Modeling of Drug Resistance: Structural and Evolutionary Models

  2014cites this paper
• Identification of single nucleotide polymorphism in rpoB gene among Mycobacterium tuberculosis isolates from Pakistan.

  2014cites this paper
• In house reverse membrane hybridisation assay versus GenoType MTBDRplus and their performance to detect mutations in the genes rpoB, katG and inhA

  2014cites this paper
• Recent Advances in Tuberculosis Diagnosis: IGRAs and Molecular Biology

  2014cites this paper
• Genotyping of FCN and MBL2 polymorphisms using pyrosequencing.

  2014cites this paper
• The Complement System

  2014cites this paper
• Detección rápida de Mycobacterium tuberculosis complex y de la resistencia a los fármacos antituberculosos mediante métodos de amplificación genética e hibridación

  2013cites this paper
• Multidrug-Resistant Tuberculosis Drug Susceptibility and Molecular Diagnostic Testing

  2013cites this paper
• A Handheld Point-of-Care Genomic Diagnostic System

  2013cites this paper
• Pyrosequencing for the rapid detection of rifampicin resistance in Mycobacterium tuberculosis: a meta-analysis.

  2013cites this paper
• Correction: A Handheld Point-of-Care Genomic Diagnostic System

  2013cites this paper
• Conditionally fluorescent molecular probes for detecting single base changes in double-stranded DNA.

  2013cites this paper
• Adaptation and evolution of drug-resistant Mycobacterium tuberculosis

  2013cites this paper
• Highlights on molecular identification of closely related species.

  2013cites this paper
• Métodos de identificación bacteriana y sus aplicaciones en la investigación odontológica

  2013cites this paper
• Genotypic detection of rifampicin-resistant M. tuberculosis strains in Syrian and Lebanese patients.

  2012cites this paper
• The use of rpoB sequence analysis in the differentiation of Mycobacterium abscessus and Mycobacterium chelonae: a critical judgement in cystic fibrosis?

  2012cites this paper
• Detection of First- and Second-Line Drug Resistance in Mycobacterium tuberculosis Clinical Isolates by Pyrosequencing

  2012cites this paper
• Rapid detection and antimicrobial resistance gene profiling of Yersinia pestis using pyrosequencing technology.

  2012cites this paper
• Progress in molecular typing of Mycobacterium avium subspecies paratuberculosis.

  2012cites this paper
• “Spoligoriftyping,” a Dual-Priming-Oligonucleotide-Based Direct-Hybridization Assay for Tuberculosis Control with a Multianalyte Microbead-Based Hybridization System

  2012cites this paper
• Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry-Based Single Nucleotide Polymorphism Genotyping Assay Using iPLEX Gold Technology for Identification of Mycobacterium tuberculosis Complex Species and Lineages

  2011cites this paper
• The evolution of Pyrosequencing® for microbiology: From genes to genomes.

  2011cites this paper
• Evaluation of Real-Time 16S rDNA PCR and Pyrosequencing for Routine Identification of Bacteria in Joint Fluid and Tissue Specimens

  2011cites this paper
• Detection of antimicrobial resistance genes and mutations associated with antimicrobial resistance in bacteria.

  2011cites this paper
• Detecting mutations in PfCRT and PfMDR1 genes among Plasmodium falciparum isolates from Saudi Arabia by pyrosequencing

  2011cites this paper
• Pyrosequencing for Rapid Molecular Detection of Rifampin and Isoniazid Resistance in Mycobacterium tuberculosis Strains and Clinical Specimens

  2011cites this paper
• IS6110-based global phylogeny of Mycobacterium tuberculosis.

  2011cites this paper
• Developing molecular amplification methods for rapid diagnosis of respiratory tract infections caused by bacterial pathogens.

  2011cites this paper
• GenoType MTBDRsl for Molecular Detection of Second-Line-Drug and Ethambutol Resistance in Mycobacterium tuberculosis Strains and Clinical Samples

  2011influential citation
• Detection and characterization of antimicrobial resistance genes in pathogenic bacteria.

  2011cites this paper
• Rapid analysis of resistant mutant genotypes using pyrosequencing.

  2010cites this paper
• Identification and Genotyping of Mycobacterium tuberculosis Complex Species by Use of a SNaPshot Minisequencing-Based Assay

  2010cites this paper
• Potential impact of rapid diagnostic tests on improving antimicrobial use

  2010cites this paper
• A pyrosequencing method for molecular monitoring of regions in the inhA, ahpC and rpoB genes of Mycobacterium tuberculosis.

  2010cites this paper
• Application of continuous culture for measuring the effect of environmental stress on mutation frequency in Mycobacterium tuberculosis.

  2010cites this paper
• DNA repair systems and the pathogenesis of Mycobacterium tuberculosis: varying activities at different stages of infection.

  2010cites this paper
• Commentary: Call for a Quality Standard for Sequence-Based Assays in Clinical Microbiology: Necessity for Quality Assessment of Sequences Used in Microbial Identification and Typing

  2010cites this paper
• Molecular characterization of mycobacterial species isolated from tuberculosis lesions seen in bovine carcasses at post mortem: a case study of three abattoirs in the Accra Region of Ghana.

  2010cites this paper
• Chapter 6 – Ear, Nose, and Throat Infections

  2010cites this paper
• Combined Real-Time PCR and rpoB Gene Pyrosequencing for Rapid Identification of Mycobacterium tuberculosis and Determination of Rifampin Resistance Directly in Clinical Specimens

  2010cites this paper
• A single point mutation in the novel PvCesA3 gene confers resistance to the carboxylic acid amide fungicide mandipropamid in Plasmopara viticola.

  2010cites this paper
• Antibiotic Resistance Protocols

  2010cites this paper
• Antimicrobial Susceptibility Testing Methods for Bacterial Pathogens

  2009cites this paper
• Pyrosequencing Based Detection of Rifampicin or Isoniazid Resistant in Mycobacterium tuberculosis

  2009cites this paper
• Genotypic Drug Resistance Assays

  2009cites this paper
• Bacterial strain typing in the genomic era.

  2009cites this paper
• Pyrosequencing identification of Mycobacterium tuberculosis W-Beijing

  2009cites this paper
• The rpoB gene as a tool for clinical microbiologists.

  2009cites this paper
• A systematic review of rapid drug susceptibility tests for multidrug-resistant tuberculosis using rifampin resistance as a surrogate.

  2009cites this paper
• Enhanced heterogeneity of rpoB in Mycobacterium tuberculosis found at low pH.

  2009cites this paper
• A Single-Step Sequencing Method for the Identification of Mycobacterium tuberculosis Complex Species

  2008cites this paper
• [Utility of molecular biology in the microbiological diagnosis of mycobacterial infections].

  2008cites this paper
• GenoType MTBDRplus Assay for Molecular Detection of Rifampin and Isoniazid Resistance in Mycobacterium tuberculosis Strains and Clinical Samples

  2008cites this paper
• Molecular inversion probes for sensitive detection of Mycobacterium tuberculosis.

  2008cites this paper
• GenoType MTBDR plus Assay for Molecular Detection of Rifampin and Isoniazid Resistance in Mycobacterium tuberculosis Strains and Clinical Samples (cid:1)

  2008cites this paper
• Utilidad de la biología molecular en el diagnóstico microbiológico de las infecciones por micobacterias

  2008cites this paper
• Prospective evaluation of pyrosequencing for the rapid detection of isoniazid and rifampin resistance in clinical Mycobacterium tuberculosis isolates

  2008cites this paper
• Evolutionary clues from comparative analysis of Mycobacterium tuberculosis variable-number tandem repeat sequences within genetic families.

  2007cites this paper
• Rapid detection and identification of bacterial pathogens using novel molecular technologies: infection control and beyond.

  2007cites this paper
• Genetic Methods for Detecting Bacterial Resistance Genes

  2007cites this paper
• Antimicrobial susceptibility testing of Mycobacterium tuberculosis (EUCAST document E.DEF 8.1)--report of the Subcommittee on Antimicrobial Susceptibility Testing of Mycobacterium tuberculosis of the European Committee for Antimicrobial Susceptibility Testing (EUCAST) of the European Society of Clin

  2007cites this paper
• Development of Multiplex Assay for Rapid Characterization of Mycobacterium tuberculosis

  2007cites this paper
• Bacteremia Due to Extended-Spectrum β-Lactamase–Producing Escherichia coli in the CTX-M Era: A New Clinical Challenge

  2006cites this paper
• Rapid Detection of Rifampin Resistance in Mycobacterium tuberculosis by Pyrosequencing Technology

  2006cites this paper
• Bacteremia due to extended-spectrum beta -lactamase-producing Escherichia coli in the CTX-M era: a new clinical challenge.

  2006cites this paper
• Molecular detection of antibiotic resistance: when and where?

  2005cites this paper
• Pyrosequencing: nucleotide sequencing technology with bacterial genotyping applications

  2005cites this paper
• Rapid Detection and Identification of Bacterial Pathogens Using Novel Molecular Technologies: Infection Control and Beyond

  year unknowncites this paper