Development of genic‐SSRs markers from soybean aphid sequences generated by high‐throughput sequencing of cDNA library

No abstract is available for this paper.

• Publication year

  2012

• Venue

  Journal of Applied Entomology

• Publication date

  2012-09-01

• Fields of study

  Agricultural and Food Sciences, Biology

• Identifiers
  DOI 10.1111/j.1439-0418.2011.01697.x
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Ecology and management of the soybean aphid in North America.

  2011cited by this paper
• Development of soybean aphid genomic SSR markers using next generation sequencing.

  2011cited by this paper
• De Novo Assembly of Chickpea Transcriptome Using Short Reads for Gene Discovery and Marker Identification

  2011cited by this paper
• Development of transcript-associated microsatellite markers for diversity and linkage mapping studies in hop (Humulus lupulus L.)

  2011cited by this paper
• Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]

  2011cited by this paper
• The next generation: Using new sequencing technologies to analyse gene regulation

  2011cited by this paper
• Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim

  2010cited by this paper
• De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

  2010influential reference
• Combining Next-Generation Sequencing Strategies for Rapid Molecular Resource Development from an Invasive Aphid Species, Aphis glycines

  2010influential reference
• A New Soybean Aphid (Hemiptera: Aphididae) Biotype Identified

  2010cited by this paper
• De novo characterization of a whitefly transcriptome and analysis of its gene expression during development

  2010cited by this paper
• Genetic diversity and differentiation among laboratory and field populations of the soybean aphid, Aphis glycines.

  2010cited by this paper
• The sequence and de novo assembly of the giant panda genome

  2010cited by this paper
• A novel locus for soybean aphid resistance

  2010cited by this paper
• Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella

  2009cited by this paper
• Next-generation sequencing technologies and their implications for crop genetics and breeding.

  2009influential reference
• Microsatellite characterization and marker development from public EST and WGS databases in the reef-building coral Acropora millepora (Cnidaria, Anthozoa, Scleractinia).

  2009cited by this paper
• Development and analysis of EST-SSRs for flax (Linum usitatissimum L.)

  2009influential reference
• Cross-Species Amplification and Polymorphism of Microsatellite Loci in the Soybean Aphid, Aphis glycines

  2009cited by this paper
• Development of chickpea EST-SSR markers and analysis of allelic variation across related species

  2009influential reference
• Population Genetic Structure of Aphis glycines

  2009cited by this paper
• Sequencing of natural strains of Arabidopsis thaliana with short reads.

  2008cited by this paper
• Microsatellites for the genus Cucurbita and an SSR-based genetic linkage map of Cucurbita pepo L.

  2008cited by this paper
• Utility of EST-derived SSRs as population genetics markers in a beetle.

  2008cited by this paper
• Genetic linkage mapping of the soybean aphid resistance gene in PI 243540

  2008cited by this paper
• Discovery of Soybean Aphid Biotypes

  2008cited by this paper
• Seasonal Progression, Symptom Development, and Yield Effects of Alfalfa mosaic virus Epidemics on Soybean in Wisconsin.

  2007cited by this paper
• Genetic relationships of D-genome species based on two types of EST-SSR markers derived from G. arboreum and G. raimondii in Gossypium

  2007cited by this paper
• Soybean aphid resistance genes in the soybean cultivars Dowling and Jackson map to linkage group M

  2006cited by this paper
• Tall fescue genomic SSR markers: development and transferability across multiple grass species

  2006cited by this paper
• Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species

  2006influential reference
• EST versus Genomic Derived Microsatellite Markers for Genotyping Wild and Cultivated Barley

  2005cited by this paper
• Resistance to Soybean Aphid in Early Maturing Soybean Germplasm

  2005cited by this paper
• Genic microsatellite markers in plants: features and applications.

  2005influential reference
• Micro-Checker: Software for identifying and correcting genotyping errors in microsatellite data

  2004cited by this paper
• EST derived SSR markers for comparative mapping in wheat and rice

  2004cited by this paper
• Microsatellites within genes: structure, function, and evolution.

  2004cited by this paper
• Medicago truncatula EST-SSRs reveal cross-species genetic markers for Medicago spp.

  2004cited by this paper
• Resistance to the Soybean Aphid in Soybean Germplasm

  2004cited by this paper
• The Soybean Aphid in China: A Historical Review

  2004influential reference
• First Report of Transmission of Soybean mosaic virus and Alfalfa mosaic virus by Aphis glycines in the New World.

  2001cited by this paper
• FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). Updated from Goudet (1995)

  2001cited by this paper
• Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with the freeware program FreeTree: application to trichomonad parasites.

  2001cited by this paper
• Occurrence and Distribution of Aphis glycines on Soybeans in Illinois in 2000 and Its Potential Control

  2001cited by this paper
• Assessment of genotypic variation among cultivated durum wheat based on EST-SSRS and genomic SSRS

  2001cited by this paper
• Selection against frameshift mutations limits microsatellite expansion in coding DNA.

  2000cited by this paper
• An economic method for the fluorescent labeling of PCR fragments

  2000cited by this paper
• Microsatellites in different eukaryotic genomes: survey and analysis.

  2000cited by this paper
• BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT

  1999influential reference
• Study on the effects of the population dynamics of soyabean aphid (Aphis glycines) on both growth and yield of soyabean.

  1996cited by this paper
• FSTAT (Version 1.2): A Computer Program to Calculate F-Statistics

  1995cited by this paper
• Nonamplifying alleles at microsatellite loci: a caution for parentage and population studies

  1995cited by this paper
• A persistent aphidborne virus of soybean, Indonesian soybean dwarf virus.

  1980cited by this paper
• Measures of the Amount of Ecologic Association Between Species

  1945cited by this paper

• Phylogenetic divergence of Lipaphis erysimi pseudobrassicae (Aphididae: Homoptera): a dominant specialist aphid on Rapeseed-mustard, India

  2022cites this paper
• Effects of chitinase-transgenic (McChit1) tobacco on the rhizospheric microflora and enzyme activities of the purple soil.

  2018cites this paper
• Microsatellite Markers Reveal a Predominant Sugarcane Aphid (Homoptera: Aphididae) Clone is Found on Sorghum in Seven States and One Territory of the USA

  2017cites this paper
• Population Genetics in Biological Control: Cryptic Species, Host-associations, and the Geographic Mosaic of Coevolution

  2015cites this paper
• Rag Virulence Among Soybean Aphids (Hemiptera: Aphididae) in Wisconsin

  2015cites this paper
• iMSAT: a novel approach to the development of microsatellite loci using barcoded Illumina libraries

  2014influential citation
• Population genetic structure and genetic diversity of soybean aphid collections from the USA, South Korea, and Japan.

  2013cites this paper
• Performance and prospects of Rag genes for management of soybean aphid

  2013cites this paper
• Development of soybean aphid genomic SSR markers using next generation sequencing.

  2011cites this paper