Genetic dissection of the developmental behaviours of plant height in wheat under diverse water regimes

Plant height (PH), a crucial trait related to yield potential in crop plants, is known to be typically quantitatively inherited. However, its full expression can be inhibited by a limited water supply. In this study, the genetic basis of the developmental behaviour of PH was assessed in a 150-line wheat (Triticum aestivum L.) doubled haploid population (Hanxuan 10×Lumai 14) grown in 10 environments (year×site×water regime combinations) by unconditional and conditional quantitative trait locus (QTL) analyses in a mixed linear model. Genes that were expressed selectively during ontogeny were identified. No single QTL was continually active in all periods of PH growth, and QTLs with additive effects (A-QTLs) expressed in the period S1|S0 (the period from the original point to the jointing stage) formed a foundation for PH development. Additive main effects (a effects), which were mostly expressed in S1|S0, were more important than epistatic main effects (aa effects) or QTL×environment interaction (QE) effects, suggesting that S1|S0 was the most significant development period affecting PH growth. A few QTLs, such as QPh.cgb-6B.7, showed high adaptability for water-limited environments. Many QTLs, including four A-QTLs (QPh.cgb-2D.1, QPh.cgb-4B.1, QPh.cgb-4D.1, and QPh.cgb-5A.7) coincident with previously identified reduced height (Rht) genes (Rht8, Rht1, Rht2, and Rht9), interacted with more than one other QTL, indicating that the genetic architecture underlying PH development is a network of genes with additive and epistatic effects. Therefore, based on multilocus combinations in S1|S0, superior genotypes were predicted for guiding improvements in breeding for PH.

• Publication year

  2010

• Venue

  Journal of Experimental Botany

• Publication date

  2010-05-24

• Fields of study

  Agricultural and Food Sciences, Medicine, Biology, Environmental Science

• Identifiers
  DOI 10.1093/jxb/erq117PMID 20497970PMCID 3298886
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• QTL mapping for developmental behavior of plant height in wheat (Triticum aestivum L.)

  2010cited by this paper
• Mapping QTLs with epistatic effects and QTL x environment interactions for plant height using a doubled haploid population in cultivated wheat.

  2008cited by this paper
• Quantitative Trait Loci for Grain Yield and Adaptation of Durum Wheat (Triticum durum Desf.) Across a Wide Range of Water Availability

  2008cited by this paper
• Synteny and candidate gene prediction using an anchored linkage map of Astyanax mexicanus

  2008cited by this paper
• Mapping the genetic architecture of complex traits in experimental populations

  2007influential reference
• Identification of Quantitative Trait loci and Environmental Interactions for Accumulation and Remobilization of Water-Soluble Carbohydrates in Wheat (Triticum aestivum L.) Stems

  2007influential reference
• Quantitative trait loci analysis for the developmental behavior of Soybean (Glycinemax L. Merr.)

  2006cited by this paper
• Development, utilization of introgression lines using a synthetic wheat as donor

  2006influential reference
• Whole-Genome Analysis of the SHORT-ROOT Developmental Pathway in Arabidopsis

  2006cited by this paper
• Molecular dissection of developmental behavior of tiller number and plant height and their relationship in rice (Oryza sativa L.).

  2006cited by this paper
• Development and QTL assessment of Triticum aestivum–Aegilops tauschii introgression lines

  2006cited by this paper
• The high-mass stellar IMF in different environments

  2006cited by this paper
• Unraveling the Dynamic Transcriptome

  2006cited by this paper
• Dissecting a wheat QTL for yield present in a range of environments: from the QTL to candidate genes.

  2006cited by this paper
• Methods for predicting superior genotypes under multiple environments based on QTL effects

  2005influential reference
• Molecular mapping of gibberellin-responsive dwarfing genes in bread wheat

  2005influential reference
• Epistasis for Fitness-Related Quantitative Traits in Arabidopsis thaliana Grown in the Field and in the Greenhouse

  2005cited by this paper
• Mapping QTL for Seedling Root Traits in Common Wheat

  2005influential reference
• Mapping quantitative trait loci controlling agronomic traits in the spring wheat cross RL4452 × 'AC Domain'

  2005cited by this paper
• Mapping quantitative trait loci controlling agronomic traits in the spring wheat cross RL4452x'AC Domain'.

  2005cited by this paper
• Whole-Genome Analysis of Temporal Gene Expression during Foregut Development

  2004cited by this paper
• Hormonal Regulation of Plant Growth and Development

  2004cited by this paper
• Epistasis: too often neglected in complex trait studies?

  2004cited by this paper
• Generating high-yielding varieties by genetic manipulation of plant architecture.

  2004cited by this paper
• The effect of different height reducing genes on the early growth of wheat.

  2004cited by this paper
• Quantitative Trait Loci Associated with Drought Tolerance at Reproductive Stage in Rice1

  2004cited by this paper
• QTLs for agronomic traits in the Mediterranean environment identified in recombinant inbred lines of the cross 'Arta' × H. spontaneum 41-1

  2003cited by this paper
• Advanced backcross QTL analysis for the identification of quantitative trait loci alleles from wild relatives of wheat (Triticum aestivum L.)

  2003cited by this paper
• QTL Mapping for Drought Tolerance at Stages of Germination and Seedling in Wheat （Triticum aestivum L. ） Using a DH Population

  2003influential reference
• Genotype-environment interactions at quantitative trait loci affecting inflorescence development in Arabidopsis thaliana.

  2003cited by this paper
• QTL × environment interactions in rice. I. Heading date and plant height

  2003cited by this paper
• Detection of QTLs for Stagonospora glume blotch resistance in Swiss winter wheat

  2003cited by this paper
• An update of the Courtot × Chinese Spring intervarietal molecular marker linkage map for the QTL detection of agronomic traits in wheat

  2003cited by this paper
• Domestication quantitative trait loci in Triticum dicoccoides, the progenitor of wheat

  2003cited by this paper
• Inheritance and localisation of resistance to Mycosphaerella graminicola causing septoria tritici blotch and plant height in the wheat (Triticum aestivum L.) genome with DNA markers

  2003cited by this paper
• "Perfect" markers for the Rht-B1b and Rht-D1b dwarfing genes in wheat

  2002influential reference
• Microsatellite analysis of wheat chromosome 2D allows the reconstruction of chromosomal inheritance in pedigrees of breeding programmes

  2002cited by this paper
• A gene's eye view of epistasis, selection and speciation

  2002cited by this paper
• Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Triticum aestivum L.)

  2002cited by this paper
• Identification of quantitative trait loci and epistatic interactions for plant height and heading date in rice

  2002cited by this paper
• Mapping epigenetic quantitative trait loci (QTL) altering a developmental trajectory.

  2002influential reference
• Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice

  2002cited by this paper
• Genetic basis of plant height and its degree of indetermination in mungbean (Vigna radiata (L.) Wilczek).

  2002cited by this paper
• [QTL analysis for epistatic effects and QTL x environment interaction effects on final height of rice (Oryza sativa L.)].

  2001influential reference
• Impact of epistasis and QTL×environment interaction on the developmental behavior of plant height in rice (Oryza sativa L.)

  2001influential reference
• ‘Green revolution’ genes encode mutant gibberellin response modulators

  1999cited by this paper
• Time-related mapping of quantitative trait loci underlying tiller number in rice.

  1999cited by this paper
• Genetic analysis of drought tolerance in maize by molecular markers I. Yield components

  1999cited by this paper
• Genetic analysis of the dwarfing gene (Rht8) in wheat. Part I. Molecular mapping of Rht8 on the short arm of chromosome 2D of bread wheat (Triticum aestivum L.)

  1998influential reference
• Quantitative trait loci analysis for the developmental behavior of tiller number in rice (Oryza sativa L.)

  1998influential reference
• Molecular dissection of developmental behavior of plant height in rice (Oryza sativa L.).

  1998influential reference
• Molecular markers linked to genes affecting plant height in wheat using a doubled-haploid population

  1998influential reference
• Developmental quantitative genetics, conditional epigenetic variability and growth in mice.

  1997influential reference
• Interactions between quantitative trait loci in soybean in which trait variation at one locus is conditional upon a specific allele at another.

  1995cited by this paper
• Analysis of conditional genetic effects and variance components in developmental genetics.

  1995cited by this paper
• The use of mixture models to detect effects of major genes on quantitative characters in a plant breeding experiment.

  1994cited by this paper
• Genes for Dwarfness in Wheat, TRITICUM AESTIVUM L.

  1973cited by this paper
• Analysis of Conditional Genetic Effects and Variance Components in Developmental Genetics

  year unknowninfluential reference

• Physics-Informed Neural Network Methods for Predicting Plant Height Development

  2026cites this paper
• Identification of a novel dwarfing gene, Rht_m097, on chromosome 4BS in common wheat

  2025cites this paper
• Genetic regulation of wheat plant architecture and future prospects for its improvement

  2024cites this paper
• Comparative transcript abundance of gibberellin oxidases genes in two barley (Hordeum vulgare) genotypes with contrasting lodging resistance under different regimes of water deficit.

  2024cites this paper
• Combined linkage analysis and association mapping identifies genomic regions associated with yield-related and drought-tolerance traits in wheat (Triticum aestivum L.)

  2023cites this paper
• Expression analysis and characterization of morpho-physiological traits for reduced height and increased lodging resistance in barley (Hordeum vulgare L.) hybrids under different water regimes

  2023cites this paper
• Overexpression of PdeGATA3 results in a dwarf phenotype.

  2022cites this paper
• A Major Quantitative Trait Loci Cluster Controlling Three Components of Yield and Plant Height Identified on Chromosome 4B of Common Wheat

  2022cites this paper
• High-Density Linkage Mapping of Agronomic Trait QTLs in Wheat under Water Deficit Condition using Genotyping by Sequencing (GBS)

  2022cites this paper
• QTL Detection for Internode Component Index in Wheat Using a RIL Mapping Population

  2022cites this paper
• Molecular Mapping of Water-Stress Responsive Genomic Loci in Lettuce (Lactuca spp.) Using Kinetics Chlorophyll Fluorescence, Hyperspectral Imaging and Machine Learning

  2021cites this paper
• Characterization of near-isogenic lines confirmed QTL and revealed candidate genes for plant height and yield-related traits in common wheat

  2021cites this paper
• Increased Power and Accuracy of Causal Locus Identification in Increased Power and Accuracy of Causal Locus Identification in Time Series Genome-wide Association in Sorghum1[OPEN] Time Series Genome-wide Association in Sorghum1[OPEN]

  2021cites this paper
• Functional principal component based time-series genome-wide association in sorghum

  2020cites this paper
• Dynamic QTL mapping for plant height in the hybrid population ofAgropyronGaertn.

  2020cites this paper
• Genetic dissection of stem WSC accumulation and remobilization in wheat (Triticum aestivum L.) under terminal drought stress

  2020cites this paper
• Major QTL for Seven Yield-Related Traits in Common Wheat (Triticum aestivum L.)

  2020cites this paper
• A novel, validated, and plant height-independent QTL for spike extension length is associated with yield-related traits in wheat

  2020cites this paper
• Plant Science Today

  2020cites this paper
• Grain size and other agronomical traits variation in a winter wheat population of doubled haploid lines

  2020cites this paper
• Effect evaluation of QTL Qph.nau-5B controlling plant height in wheat

  2020influential citation
• Increased Power and Accuracy of Causal Locus Identification in Time Series Genome-wide Association in Sorghum1[OPEN]

  2020cites this paper
• Genome-wide association study of yield and related traits in common wheat under salt-stress conditions

  2020cites this paper
• Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform

  2020influential citation
• Mapping developmental QTL for plant height in soybean [Glycine max (L.) Merr.] using a four-way recombinant inbred line population

  2019cites this paper
• Morphological traits and Nastism of Mango ginger (Curcuma amada Roxb.)

  2019cites this paper
• Mapping dynamic QTL dissects the genetic architecture of grain size and grain filling rate at different grain-filling stages in barley

  2019cites this paper
• Stable QTLs for Plant Height on Chromosome A09 Identified From Two Mapping Populations in Peanut (Arachis hypogaea L.)

  2018influential citation
• TaARF4 genes are linked to root growth and plant height in wheat

  2018cites this paper
• Association Mapping for Important Agronomic Traits in Safflower (Carthamus tinctorius L.) Core Collection Using Microsatellite Markers

  2018cites this paper
• A dCAPS marker developed from a stress associated protein gene TaSAP7-B governing grain size and plant height in wheat

  2018cites this paper
• Combining ability and gene action controlling yield and yield components in bread wheat (Triticum aestivum L.) under drought-stressed and nonstressed conditions

  2018cites this paper
• Global QTL Analysis Identifies Genomic Regions on Chromosomes 4A and 4B Harboring Stable Loci for Yield-Related Traits Across Different Environments in Wheat (Triticum aestivum L.)

  2018influential citation
• Adaptive selection of founder segments and epistatic control of plant height in the MAGIC winter wheat population WM-800

  2018cites this paper
• Characterization of the temporal and spatial expression of wheat (Triticum aestivum L.) plant height at the QTL level and their influence on yield-related traits

  2017cites this paper
• Mapping QTL for stay-green and agronomic traits in wheat under diverse water regimes

  2017cites this paper
• Elite Haplotypes of a Protein Kinase Gene TaSnRK2.3 Associated with Important Agronomic Traits in Common Wheat

  2017influential citation
• Adaptation and Stability Analysis of ICARDA Durum Wheat Elites across 18 Countries

  2017cites this paper
• QTL mapping for yield and photosynthetic related traits under different water regimes in wheat

  2017cites this paper
• Identification of Quantitative Trait Loci and Water Environmental Interactions for Developmental Behaviors of Leaf Greenness in Wheat

  2016influential citation
• Genetic dissection of the developmental behavior of plant height in rice under different water supply conditions

  2016cites this paper
• Genome-wide association study of dynamic developmental plant height in soybean

  2016cites this paper
• Polymorphism and association analysis of a drought-resistant gene TaLTP-s in wheat

  2016cites this paper
• DYNAMIC QTL ANALYSIS OF CHLOROPHYLL CONTENT DURING GRAIN FILLING STAGE IN WINTER WHEAT ( TRITICUM AESTIVUM L . )

  2016cites this paper
• Development and Genetic Control of Plant Architecture and Biomass in the Panicoid Grass, Setaria

  2016cites this paper
• Time dependent genetic analysis links field and controlled environment phenotypes in the model C4 grass Setaria

  2016cites this paper
• Two Novel AP2/EREBP Transcription Factor Genes TaPARG Have Pleiotropic Functions on Plant Architecture and Yield-Related Traits in Common Wheat

  2016cites this paper
• Meta‐Analysis of Wheat QTL Regions Associated with Adaptation to Drought and Heat Stress

  2015cites this paper
• Genetic dissection of the developmental behaviour of total starch content and its components in wheat grain

  2015influential citation
• Staying Alive or Going to Die During Terminal Senescence—An Enigma Surrounding Yield Stability

  2015cites this paper
• Nitrogen use efficiency inwheat in bread wheat (T. aestivum L.) : breeding & gene discovery

  2015cites this paper
• MicroRNA and mRNA expression profiling analysis revealed the regulation of plant height in Gossypium hirsutum

  2015cites this paper
• Dynamic and comparative QTL analysis for plant height in different developmental stages of Brassica napus L.

  2015cites this paper
• MAPPING QUANTITATIVE TRAIT LOCI FOR GRAIN YIELD AND YIELD RELATED TRAITS IN A HEXAPLOID WINTER WHEAT DOUBLED HAPLOID POPULATION

  2015cites this paper
• Quantitative Trait Loci Mapping for Plant Height in Tobacco using Linkage and Association Mapping Methods

  2015cites this paper
• An integrative proteome analysis of different seedling organs in tolerant and sensitive wheat cultivars under drought stress and recovery

  2015cites this paper
• Mapping QTL for water regime in spring bread wheat

  2014cites this paper
• Phosphoproteome analysis reveals new drought response and defense mechanisms of seedling leaves in bread wheat (Triticum aestivum L.).

  2014cites this paper
• Identification of QTLs associated with salt or alkaline tolerance at the seedling stage in rice under salt or alkaline stress

  2014cites this paper
• The climate of the zone of origin of Mediterranean durum wheat (Triticum durum Desf.) landraces affects their agronomic performance

  2014cites this paper
• QTLs for uppermost internode and spike length in two wheat RIL populations and their affect upon plant height at an individual QTL level

  2014cites this paper
• Identification of quantitative trait loci for phosphorus use efficiency traits in rice using a high density SNP map

  2014cites this paper
• Genetic Dissection of QTL Associated with Grain Yield in Diverse Environments

  2014cites this paper
• A genome-wide identification of chromosomal regions determining nitrogen use efficiency components in wheat (Triticum aestivum L.)

  2014cites this paper
• Quantitative trait loci × environment interactions for plant morphology vary over ontogeny in Brassica rapa.

  2014cites this paper
• Integrative network analysis of the signaling cascades in seedling leaves of bread wheat by large-scale phosphoproteomic profiling.

  2014cites this paper
• Nuclear-cytoplasmic interaction analysis: A critical step for wheat germplasm enhancement

  2014cites this paper
• Paclobutrazol application effects on plant height, seed yield and carbohydrate metabolism in canola.

  2014cites this paper
• QTL and association mapping for plant abiotic stress tolerance

  2014cites this paper
• Physical and morphological markers for adaptation of drought-tolerant wheat to arid environments.

  2014cites this paper
• Genetic analysis of terminal heat tolerance in wheat using molecular markers

  2014cites this paper
• Effect of Drought/Water Stress and Adaptation to Unintended Consequences of Wheat Growth and Development in Pakistan

  2014cites this paper
• Association Mapping For Drought Tolerance In Wheat (Triticum Aestivum L.)

  2013cites this paper
• Association Analysis of Genotypic and Phenotypic Traits Using SSR Marker in Durum Wheat

  2013cites this paper
• Estimation of Heterosis, Heterobeltiosis and Potence Ratio Over Environments Among Pre and Post Green Revolution Spring wheat in Pakistan

  2013cites this paper
• Single-nucleotide polymorphisms and association analysis of drought-resistance gene TaSnRK2.8 in common wheat.

  2013cites this paper
• Cloning and characterization of TaSnRK2.3, a novel SnRK2 gene in common wheat

  2013cites this paper
• Mapping QTLs for yield and nitrogen-related traits in wheat: influence of nitrogen and phosphorus fertilization on QTL expression

  2013cites this paper
• Efficacy of pyramiding elite alleles for dynamic development of plant height in common wheat

  2013cites this paper
• Genetic Dissection of Yield and Its Component Traits Using High-Density Composite Map of Wheat Chromosome 3A: Bridging Gaps between QTLs and Underlying Genes

  2013cites this paper
• Genetic dissection of developmental behavior of grain weight in wheat under diverse temperature and water regimes

  2012cites this paper
• Cloning and haplotype analysis of TaSTE, which is associated with plant height in bread wheat (Triticum aestivum L.)

  2012cites this paper
• The low down on association mapping in hexaploid wheat (Triticum aestivum L.)

  2012cites this paper
• QTL Detection of Internode Length and Its Component Index in Wheat Using Two Related RIL Populations

  2012cites this paper
• Mapping QTLs for seedling root traits in a doubled haploid wheat population under different water regimes

  2012cites this paper
• Conditional QTL mapping for plant height with respect to the length of the spike and internode in two mapping populations of wheat

  2011influential citation
• Expression of a wheat MYB gene in transgenic tobacco enhances resistance to Ralstonia solanacearum, and to drought and salt stresses

  2011cites this paper
• Association mapping of dynamic developmental plant height in common wheat

  2011cites this paper
• Mapping QTLs for Seminal Root Architecture and Coleoptile Length in Wheat

  2011cites this paper
• Genetic analysis of carbon isotope discrimination and its relation to yield in a wheat doubled haploid population.

  2011cites this paper
• QTL mapping for developmental behavior of plant height in wheat (Triticum aestivum L.)

  2010cites this paper
• Analysis of Genetic Diversity and Trapping Elite Alleles for Plant Height in Drought-Tolerant Wheat Cultivars

  2010cites this paper