Transcriptome analysis of Glomus mosseae/Medicago sativa mycorrhiza on atrazine stress

Arbuscular mycorrhizal fungi (AMF) protect host plants against diverse biotic and abiotic stresses and promote biodegradation of various contaminants. In this study effect of Glomus mosseae/Medicago sativa mycorrhiza on atrazine degradation was investigated. It was observed that the atrazine degradation rates with any addition level in mycorrhizal treatments were all significantly higher than those in non- mycorrhizal treatments. When atrazine was applied at 20 mg kg−1, the removal efficiency was up to 74.65%. Therefore, G. mosseae can be considered as ideal inhabitants of technical installations to facilitate phytoremediation. Furthermore, a total of 10.4 Gb was used for de novo transcriptome assembly, resulting in a comprehensive data set for the identification of genes corresponding to atrazine stress in the AM association. After comparative analysis with edgeR, a total of 2,060 differential expressed genes were identified, including 570 up-regulated genes and 1490 down-regulated genes. After excluding ‘function unknown’ and ‘general function predictions only’ genes, 172 up-regulated genes were obtained. The differentially expressed genes in AM association with and without atrazine stress were associated with molecular processes/other proteins, zinc finger protein, intracellular/extracellular enzymes, structural proteins, anti-stress/anti-disease protein, electron transport-related protein and plant growth associated protein. Our results not only prove AMF has important ecological significance on atrazine degradation but also provide evidence for the molecular mechanisms of atrazine degradation by AMF.

• Publication year

  2016

• Venue

  Scientific Reports

• Publication date

  2016-02-02

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1038/srep20245PMID 26833403PMCID 4735738
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Effects of atrazine on photosynthesis and defense response and the underlying mechanisms in Phaeodactylum tricornutum

  2015cited by this paper
• The genetic diversity and introgression of Juglans regia and Juglans sigillata in Tibet as revealed by SSR markers

  2015cited by this paper
• RNA-Seq analysis for transcriptome assembly, gene identification, and SSR mining in ginkgo (Ginkgo biloba L.)

  2015cited by this paper
• Long-term fertilizer application effects on the soil, root arbuscular mycorrhizal fungi and community composition in rotation agriculture

  2015cited by this paper
• Community structure of arbuscular mycorrhizal fungi associated with Robinia pseudoacacia in uncontaminated and heavy metal contaminated soils

  2015cited by this paper
• Bioremediation of atrazine: recent advances and promises

  2014cited by this paper
• Atrazine biodegradation by a monoculture of Raoultella planticola isolated from a herbicides wastewater treatment facility

  2014cited by this paper
• Bacterial degradation of Aroclor 1242 in the mycorrhizosphere soils of zucchini (Cucurbita pepo L.) inoculated with arbuscular mycorrhizal fungi

  2014cited by this paper
• C2H2 type of zinc finger transcription factors in foxtail millet define response to abiotic stresses

  2014cited by this paper
• Glomus mosseae enhances root growth and Cu and Pb acquisition of upland rice (Oryza sativa L.) in contaminated soils

  2014cited by this paper
• Wheat zinc finger protein TaLSD1, a negative regulator of programmed cell death, is involved in wheat resistance against stripe rust fungus.

  2013cited by this paper
• Genome-wide analysis of the CCCH zinc finger gene family in Medicago truncatula

  2013cited by this paper
• Transcript analysis of stress defence genes in a white poplar clone inoculated with the arbuscular mycorrhizal fungus Glomus mosseae and grown on a polluted soil.

  2013cited by this paper
• Redox Regulation in Plants: Glutathione and “Redoxin” Related Families

  2013cited by this paper
• Benzo[a]pyrene induced lipid changes in the monoxenic arbuscular mycorrhizal chicory roots.

  2012cited by this paper
• Arbuscule-containing and non-colonized cortical cells of mycorrhizal roots undergo extensive and specific reprogramming during arbuscular mycorrhizal development.

  2012cited by this paper
• Comparative Analysis of Zinc Finger Proteins Involved in Plant Disease Resistance

  2012cited by this paper
• Cloning and transcript analysis of type 2 metallothionein gene (SbMT-2) from extreme halophyte Salicornia brachiata and its heterologous expression in E. coli.

  2012cited by this paper
• Metabolic ability and gene characteristics of Arthrobacter sp. strain DNS10, the sole atrazine-degrading strain in a consortium isolated from black soil

  2011cited by this paper
• Memory, Visual Discrimination Performance, and the Human Hippocampus

  2011cited by this paper
• Determination of atrazine and degradation products in Luxembourgish drinking water: origin and fate of potential endocrine-disrupting pesticides

  2011cited by this paper
• GsZFP1, a new Cys2/His2-type zinc-finger protein, is a positive regulator of plant tolerance to cold and drought stress

  2011cited by this paper
• The Arabidopsis C2H2 Zinc Finger INDETERMINATE DOMAIN1/ENHYDROUS Promotes the Transition to Germination by Regulating Light and Hormonal Signaling during Seed Maturation[W]

  2011cited by this paper
• Enhanced dissipation of PAHs from soil using mycorrhizal ryegrass and PAH-degrading bacteria.

  2011cited by this paper
• Arbuscular mycorrhizal fungi restore normal growth in a white poplar clone grown on heavy metal-contaminated soil, and this is associated with upregulation of foliar metallothionein and polyamine biosynthetic gene expression.

  2010cited by this paper
• An improved method to stain arbuscular mycorrhizal fungi in plant roots

  2010cited by this paper
• Using soil bacteria to facilitate phytoremediation.

  2010cited by this paper
• Effect of Arbuscular Mycorrhizal (AM) Fungi on Atrazine Degradation in Soil Planted Sorghum

  2010cited by this paper
• GhZFP1, a novel CCCH-type zinc finger protein from cotton, enhances salt stress tolerance and fungal disease resistance in transgenic tobacco by interacting with GZIRD21A and GZIPR5.

  2009cited by this paper
• The Arabidopsis ATAF1, a NAC transcription factor, is a negative regulator of defense responses against necrotrophic fungal and bacterial pathogens.

  2009cited by this paper
• Influence of Glomus etunicatum/Zea mays mycorrhiza on atrazine degradation, soil phosphatase and dehydrogenase activities, and soil microbial community structure

  2009cited by this paper
• Degradation of atrazine in aqueous medium by electrocatalytically generated hydroxyl radicals. A kinetic and mechanistic study.

  2009cited by this paper
• Effect of arbuscular mycorrhizal fungus (Glomus caledonium) on the accumulation and metabolism of atrazine in maize (Zea mays L.) and atrazine dissipation in soil.

  2007cited by this paper
• Bmc Plant Biology Differential Patterns of Reactive Oxygen Species and Antioxidative Mechanisms during Atrazine Injury and Sucrose-induced Tolerance in Arabidopsis Thaliana Plantlets

  year unknowncited by this paper

• Occurrence, Toxicodynamics, and Mechanistic Insights for Atrazine Degradation in the Environment

  2024influential citation
• Disentangling the contributions of arbuscular mycorrhizal fungi to soil multifunctionality

  2024cites this paper
• Microbial community in the Leymus chinensis rhizosphere associates with its high production in mild saline–alkaline grassland

  2023cites this paper
• The Effects of Rhizophagus irregularis Inoculation on Transcriptome of Medicago lupulina Leaves at Early Vegetative and Flowering Stages of Plant Development

  2023cites this paper
• A synthesis of functional contributions of rhizobacteria to growth promotion in diverse crops

  2022cites this paper
• Toxicological effects, environmental behaviors and remediation technologies of herbicide atrazine in soil and sediment: A comprehensive review.

  2022cites this paper
• Omics and phytoremediation

  2022cites this paper
• Inoculation with Arbuscular Mycorrhizal Fungi Reinforces Tea Plant’s Tolerance to Salinity

  2021cites this paper
• Molecular and cellular changes of arbuscular mycorrhizal fungi-plant interaction in pesticide contamination

  2021cites this paper
• Rhizosphere Biology: Interactions Between Microbes and Plants

  2021cites this paper
• Role of reactive oxygen species in the regulation of abiotic stress tolerance in legumes

  2021cites this paper
• Mycoremediation: A Sustainable Approach for Pesticide Pollution Abatement

  2020cites this paper
• Benefits of arbuscular mycorrhizal fungi in reducing organic contaminant residues in crops: Implications for cleaner agricultural production

  2020cites this paper
• Changes in rhizobacterial community mediating atrazine dissipation by arbuscular mycorrhiza.

  2020cites this paper
• Biodegradation of atrazine and ligninolytic enzyme production by basidiomycete strains

  2020cites this paper
• Molecular Mechanisms of Plant–Microbe Interactions in the Rhizosphere as Targets for Improving Plant Productivity

  2020cites this paper
• Transcriptome analysis of the differential effect of the NADPH oxidase gene RbohB in Phaseolus vulgaris roots following Rhizobium tropici and Rhizophagus irregularis inoculation

  2019cites this paper
• Analysis of transcripts and splice isoforms in Medicago sativa L. by single-molecule long-read sequencing

  2019cites this paper
• Implementation of Omics Research to Enhance Phytoremediation Efficiency - a Review

  2018cites this paper
• Proteomic analysis of the response of Funnelifor mismosseae/Medicago sativa to atrazine stress

  2018cites this paper
• Plant food allergy: Influence of chemicals on plant allergens.

  2018cites this paper
• Responses of photosynthesis-related parameters and chloroplast ultrastructure to atrazine in alfalfa (Medicago sativa L.) inoculated with arbuscular mycorrhizal fungi.

  2018cites this paper
• Responses of nonenzymatic antioxidants to atrazine in arbuscular mycorrhizal roots of Medicago sativa L.

  2018cites this paper
• Germination of Seeds and Seedling Growth of Amaranthus retroflexus L. Following Sublethal Exposure of Parent Plants to Herbicides

  2017cites this paper
• Genetic diversity of the symbiotic fungus: Rhizophagus irregularis and its effect on a plant host and a plant community

  2017cites this paper
• Reactive Oxygen Species (ROS) Metabolism and Signaling in Plant-Mycorrhizal Association Under Biotic and Abiotic Stress Conditions

  2017cites this paper
• Reactive Oxygen Species Generation-Scavenging and Signaling during Plant-Arbuscular Mycorrhizal and Piriformospora indica Interaction under Stress Condition

  2016cites this paper
• Stressed out symbiotes: hypotheses for the influence of abiotic stress on arbuscular mycorrhizal fungi

  2016cites this paper