Consistency of genome‐based methods in measuring Metazoan evolution

No abstract is available for this paper.

• Publication year

  2005

• Venue

  FEBS Letters

• Publication date

  2005-06-13

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/j.febslet.2005.04.006PMID 15943981
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Very slightly deleterious mutations and the molecular clock

  2005cited by this paper
• An examination of the constancy of the rate of molecular evolution

  2005cited by this paper
• Sociality and the rate of molecular evolution.

  2005cited by this paper
• Comparative biosequence metrics

  2005influential reference
• Molecular dating: ape bones agree with chicken entrails.

  2005cited by this paper
• Molecular timescales and the fossil record: a paleontological perspective.

  2004cited by this paper
• Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

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• Synonymous and nonsynonymous substitutions in mammalian genes and the nearly neutral theory

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• Genome-Wide Molecular Clock and Horizontal Gene Transfer in Bacterial Evolution

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• Ensembl 2005

  2004cited by this paper
• SMART 4.0: towards genomic data integration

  2004cited by this paper
• A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes

  2004cited by this paper
• Precision of molecular time estimates.

  2004cited by this paper
• Explosive radiations and the reliability of molecular clocks: island endemic radiations as a test case.

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• Systematic searches for molecular synapomorphies in model metazoan genomes give some support for Ecdysozoa after accounting for the idiosyncrasies of Caenorhabditis elegans

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• Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision.

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• A Non-Adaptationist Perspective on Evolution of Genomic Complexity or the Continued Dethroning of Man

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• The Pfam protein families database

  2004cited by this paper
• Pushing the envelope on molecular dating.

  2004cited by this paper
• The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics

  2003cited by this paper
• Molecular Clocks and Explosive Radiations

  2003cited by this paper
• Time flies, a new molecular time-scale for brachyceran fly evolution without a clock.

  2003cited by this paper
• Genome-scale approaches to resolving incongruence in molecular phylogenies

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• pkn22 (alr2502) encoding a putative Ser/Thr kinase in the cyanobacterium Anabaena sp. PCC 7120 is induced by both iron starvation and oxidative stress and regulates the expression of isiA

  2003cited by this paper
• Coelomata and not Ecdysozoa: evidence from genome-wide phylogenetic analysis.

  2003cited by this paper
• The Origins of Genome Complexity

  2003cited by this paper
• The modern molecular clock

  2003cited by this paper
• The origin and evolution of model organisms

  2002cited by this paper
• Divergence time and evolutionary rate estimation with multilocus data.

  2002cited by this paper
• SHOT: a web server for the construction of genome phylogenies.

  2002cited by this paper
• An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks.

  2002cited by this paper
• Comparative Genome and Proteome Analysis of Anopheles gambiae and Drosophila melanogaster

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• Divergence Time and Evolutionary Rate Estimation with Multilocus Data

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• Testing the new animal phylogeny: first use of combined large-subunit and small-subunit rRNA gene sequences to classify the protostomes.

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• The European database on small subunit ribosomal RNA

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• Animal phylogeny and the ancestry of bilaterians: inferences from morphology and 18S rDNA gene sequences

  2001cited by this paper
• How malleable is the eukaryotic genome? Extreme rate of chromosomal rearrangement in the genus Drosophila.

  2001cited by this paper
• Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

  2000cited by this paper
• Triploblastic relationships with emphasis on the acoelomates and the position of Gnathostomulida, Cycliophora, Plathelminthes, and Chaetognatha: a combined approach of 18S rDNA sequences and morphology.

  2000cited by this paper
• Genome phylogeny based on gene content

  1999cited by this paper
• A molecular timescale for vertebrate evolution

  1998cited by this paper
• Measuring genome evolution.

  1998cited by this paper
• An episodic change of rDNA nucleotide substitution rate has occurred during the emergence of the insect order Diptera.

  1997cited by this paper
• Evidence for a clade of nematodes, arthropods and other moulting animals

  1997influential reference
• Determining Divergence Times of the Major Kingdoms of Living Organisms with a Protein Clock

  1996cited by this paper
• Synonymous and nonsynonymous substitutions in mammalian genes and the nearly neutral theory.

  1995cited by this paper
• CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

  1994cited by this paper
• Relative rates of nucleotide substitution at the rbcl locus of monocotyledonous plants

  1992cited by this paper
• Extreme rates and heterogeneity in insect DNA evolution

  1990cited by this paper
• Molecular phylogeny of the animal kingdom.

  1988cited by this paper
• FEBS Letters

  1987cited by this paper
• Selective constraint in protein polymorphism: study of the effectively neutral mutation model by using an improved pseudosampling method.

  1983cited by this paper
• Protein evolution and the molecular clock.

  1976cited by this paper
• Molecules as documents of evolutionary history.

  1965cited by this paper

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• Deeply conserved synteny and the evolution of metazoan chromosomes

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• Variation across Species and Levels: Implications for Model Species Research

  2019cites this paper
• The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

  2014cites this paper
• Recent findings in evolution and function of insect innexins

  2014cites this paper
• Analyse comparative des génomes d’espèces majeures pour l’aquaculture par cartographie RH et Identification des répertoires des récepteurs olfactifs (OR) et TAAR des cichlides

  2013cites this paper
• Evolutionary crossroads in developmental biology: annelids

  2012cites this paper
• Formyl Peptide Receptors from Immune and Vomeronasal System Exhibit Distinct Agonist Properties

  2012cites this paper
• Evolutionary crossroads in developmental biology

  2012cites this paper
• Extensive chordate and annelid macrosynteny reveals ancestral homeobox gene organization.

  2012cites this paper
• Evolutionary dynamics of simple sequence repeats across long evolutionary time scale in genus Drosophila

  2012cites this paper
• CONSERVED VIRUS PROTEIN FAMILIES IN BACTERIOPHAGE GENOMES AND IN METAGENOMES OF HUMANS

  2011cites this paper
• Computational methods for Gene Orthology inference

  2011cites this paper
• Identifying Single Copy Orthologs in Metazoa

  2011cites this paper
• Evolution of genome architecture.

  2009cites this paper
• Cross-species analysis of the glycolytic pathway by comparison of molecular interaction fields.

  2009cites this paper
• Cryptic complexity captured: the Nematostella genome reveals its secrets.

  2008cites this paper
• A Rigorous Analysis of the Pattern of Intron Conservation Supports the Coelomata Clade of Animals

  2007cites this paper
• Quantification of insect genome divergence.

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• Quantification of ortholog losses in insects and vertebrates

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• The global landscape of sequence diversity

  2007cites this paper
• Wege der Mikroevolution und Artbildung bei Bienen (Apoidea, Hymenoptera): Populationsgenetische und empirische Aspekte

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• Intron size in mammals: complexity comes to terms with economy.

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• Support for the Coelomata clade of animals from a rigorous analysis of the pattern of intron conservation.

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• Ecdysozoan clade rejected by genome-wide analysis of rare amino acid replacements.

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• Vertebrate conserved non coding DNA regions have a high persistence length and a short persistence time

  2007cites this paper
• Structure, évolution et expression de gènes « chimériques » spécifiques des Primates

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• SmPKC1, a new protein kinase C identified in the platyhelminth parasite Schistosoma mansoni.

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• Erratum: Insights into social insects from the genome of the honeybee Apis mellifera

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• TreeFam: a curated database of phylogenetic trees of animal gene families

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