Frequencies of Ty1-copia and Ty3-gypsy retroelements within the Triticeae EST databases

No abstract is available for this paper.

• Publication year

  2002

• Venue

  Theoretical and Applied Genetics

• Publication date

  2002-04-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1007/s00122-001-0849-1PMID 12582644
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• A bacterial artificial chromosome library for barley (Hordeum vulgare L.) and the identification of clones containing putative resistance genes

  2000cited by this paper
• Development of an efficient maintenance and screening system for large-insert genomic DNA libraries of hexaploid wheat in a transformation-competent artificial chromosome (TAC) vector.

  2000cited by this paper
• A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion.

  2000cited by this paper
• Phylogeny and transpositional activity of Ty1-copia group retrotransposons in cereal genomes

  1999influential reference
• Wheat genomics

  1999cited by this paper
• Of Genes and Genomes

  1999influential reference
• Retrotransposon BARE-1 and Its Role in Genome Evolution in the Genus Hordeum

  1999cited by this paper
• Retrotransposon BARE-1: expression of encoded proteins and formation of virus-like particles in barley cells

  1999cited by this paper
• Plant retrotransposons.

  1999influential reference
• Construction and characterization of a bacterial artificial chromosome (BAC) library for the A genome of wheat.

  1999cited by this paper
• Construction and characterisation of a large DNA insert library from the D genome of wheat

  1999cited by this paper
• A 13-bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors.

  1999cited by this paper
• A contiguous 60 kb genomic stretch from barley reveals molecular evidence for gene islands in a monocot genome.

  1998cited by this paper
• Characterization and genomic organization of Ty1-copia group retrotransposons in rye (Secale cereale).

  1997cited by this paper
• Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

  1997influential reference
• Retrotransposons of rice involved in mutations induced by tissue culture.

  1996cited by this paper
• Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome

  1996cited by this paper
• The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays

  1996cited by this paper
• Activation of tobacco retrotransposons during tissue culture.

  1993cited by this paper

• Transcriptome-wide identification and systematic analysis of the Retrotransposon genes and their roles in ginsenoside biosynthesis in Panax ginseng

  2025cites this paper
• An EnSpm interspersed repeat identified in Triticum aestivum and implicated in resistance to Diuraphis noxia

  2018cites this paper
• Apomixis frequency under stress conditions in weeping lovegrass (Eragrostis curvula)

  2017cites this paper
• Transcriptionally active LTR retroelement-related sequences and their relationship with small RNA in moso bamboo (Phyllostachys edulis)

  2017cites this paper
• Transposable Elements in Setaria Genomes

  2017cites this paper
• Chimeras Linked to Tandem Repeats and Transposable Elements in Tetraploid Hybrid Fish

  2017cites this paper
• Chimeras Link to Tandem Repeats and Transposable Elements in Tetraploid Hybrid Fish

  2016cites this paper
• RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways

  2016cites this paper
• LTR retrotransposons, handy hitchhikers of plant regulation and stress response.

  2015cites this paper
• Repetitive sequences in Eragrostis curvula cDNA EST libraries obtained from genotypes with different ploidy

  2015cites this paper
• Stress responsive gene bioprospecting studies from extremophilic and extremotolerant microalgae: characterization and functional validation of genes involved in acid, salt and thermal stress

  2015cites this paper
• Transcriptionally active LTR retrotransposons in Eucalyptus genus are differentially expressed and insertionally polymorphic

  2015cites this paper
• RETROTRANSPOZONU STRUKTŪRA PARASTĀS PRIEDES (PINUS SYLVESTRIS L.) GENOMĀ UN TO EKSPRESIJA

  2014cites this paper
• Stress-induced transcriptional activation of retrotransposon-like sequences in the Scots pine (Pinus sylvestris L.) genome

  2014cites this paper
• (PINUS SYLVESTRIS L.) GENOMĀ UN TO EKSPRESIJA Promocijas darba kopsavilkums

  2014cites this paper
• Characterization of tolerance to Fusarium oxysporum f.sp., cubense infection in banana using suppression subtractive hybridization and gene expression analysis

  2013cites this paper
• In-Silico Identification of LTR type Retrotransposons and Their Transcriptional Activities in Solanum Tuberosum

  2013influential citation
• Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns

  2012cites this paper
• LTR Retrotransposons as Controlling Elements of Genome Response to Stress

  2012cites this paper
• Use of methylation filtration and C(0)t fractionation for analysis of genome composition and comparative genomics in bread wheat.

  2011influential citation
• Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence

  2011cites this paper
• Predicting molecular markers of development and regeneration through integrative analysis of high-throughput genomics data

  2010cites this paper
• Small RNAs, DNA methylation and transposable elements in wheat

  2010cites this paper
• Analysis of the wheat endosperm transcriptome

  2010cites this paper
• Triticeae Genome Structure and Evolution

  2009cites this paper
• SURE e Garapa: caracterização molecular e distribuição de dois retrotransposons com LTR em cana-de-açúcar.

  2009cites this paper
• Control of flowering time and spike development in cereals: the earliness per se Eps-1 region in wheat, rice, and Brachypodium

  2009cites this paper
• Isolation and characterization of genomic retrotransposon sequences from octoploid strawberry (Fragaria × ananassa Duch.)

  2008cites this paper
• Reme1, a Copia retrotransposon in melon, is transcriptionally induced by UV light

  2007cites this paper
• The Centromeric Retrotransposons of Rice Are Transcribed and Differentially Processed by RNAi

  2007cites this paper
• The Centromeric Retrotransposons of Rice Are Transcribed and Differentially Processed by RNA Interference

  2007cites this paper
• Studies on genome relationship and species-specific PCR marker for Dasypyrum breviaristatum in Triticeae.

  2006cites this paper
• A movable feast: diverse retrotransposons and their contribution to barley genome dynamics

  2005cites this paper
• Phenotypic impacts of repetitive DNA in flowering plants.

  2005cites this paper
• Tempos of Gene Locus Deletions and Duplications and Their Relationship to Recombination Rate During Diploid and Polyploid Evolution in the Aegilops-Triticum Alliance

  2005influential citation
• Reply to Regulatory regimes for transgenic crops

  2005cites this paper
• Activation de rétrotransposons de plantes par le stress et impact sur les génomes hôtes

  2004cites this paper
• Sequencing of the Triticum monococcum Hardness locus reveals good microcolinearity with rice

  2004cites this paper
• Genomic organization of the complex alpha-gliadin gene loci in wheat.

  2004cites this paper
• Genomic organization of the complex α-gliadin gene loci in wheat

  2004cites this paper
• MOLECULAR BIOLOGY AND PHYSIOLOGY Ty3/gypsy Retro-Transposons in Egyptian cotton (G. barbadense)

  2004cites this paper
• Title Sequencing of the Triticum monococcum Hardness locus reveals good microcolinearity with rice Permalink

  2004cites this paper
• Organization of retrotransposons and microsatellites in cereal genomes

  2004cites this paper
• A 2500-Locus Bin Map of Wheat Homoeologous Group 5 Provides Insights on Gene Distribution and Colinearity With Rice

  2004cites this paper
• A Unique Set of 11,008 Onion Expressed Sequence Tags Reveals Expressed Sequence and Genomic Differences between the Monocot Orders Asparagales and Poales Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.0

  2004cites this paper
• Bioinformatics and Triticeae Genomics: Resources and Future Developments

  2004cites this paper
• Sequence composition, organization, and evolution of the core Triticeae genome.

  2004cites this paper
• Identification and genomic distribution of gypsy like retrotransposons in Citrus and Poncirus

  2003cites this paper
• Highly abundant pea LTR retrotransposon Ogre is constitutively transcribed and partially spliced

  2003cites this paper
• Annotation and BAC/PAC localization of nonredundant ESTs from drought-stressed seedlings of anindica rice

  2002cites this paper
• TREP: a database for Triticeae repetitive elements

  2002cites this paper