A new type of metal-binding site in cobalt- and zinc-containing adenylate kinases isolated from sulfate-reducers Desulfovibrio gigas and Desulfovibrio desulfuricans ATCC 27774.

No abstract is available for this paper.

• Publication year

  2008

• Venue

  Journal of Inorganic Biochemistry

• Publication date

  2008-05-01

• Fields of study

  Biology, Medicine, Chemistry, Environmental Science

• Identifiers
  DOI 10.1016/j.jinorgbio.2008.01.023PMID 18328566
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Molecular cloning and characterization of a novel adenylate kinase 3 gene from Clonorchis sinensis

  2005cited by this paper
• The crystal structure of human adenylate kinase 6: An adenylate kinase localized to the cell nucleus.

  2005cited by this paper
• Crystal structure of a novel zinc-binding ATP sulfurylase from Thermus thermophilus HB8.

  2004cited by this paper
• Structures and Analysis of Highly Homologous Psychrophilic, Mesophilic, and Thermophilic Adenylate Kinases*

  2004cited by this paper
• Structural stability of adenylate kinase from the sulfate-reducing bacteria Desulfovibrio gigas.

  2004cited by this paper
• Anaerobes: the Sulfate‐Reducing Bacteria as an Example of Metabolic Diversity

  2004cited by this paper
• Associative mechanism for phosphoryl transfer: A molecular dynamics simulation of Escherichia coli adenylate kinase complexed with its substrates

  2004cited by this paper
• Thermotoga neapolitana adenylate kinase is highly active at 30 degrees C.

  2003cited by this paper
• Novel Trimeric Adenylate Kinase from an Extremely Thermoacidophilic Archaeon, Sulfolobus solfataricus: Molecular Cloning, Nucleotide Sequencing, Expression in Escherichia coli,…

  2002cited by this paper
• Cloning and Characterization of Adenylate Kinase fromChlamydia pneumoniae *

  2001cited by this paper
• Phosphorylation of nucleosides and nucleoside analogs by mammalian nucleoside monophosphate kinases.

  2000cited by this paper
• A class of zinc fingers involved in protein-protein interactions biophysical characterization of CCHC fingers from fog and U-shaped.

  2000cited by this paper
• Oligomerization and substrate binding studies of the adenylate kinase from Sulfolobus acidocaldarius by matrix-assisted laser desorption/ionization mass spectrometry

  2000cited by this paper
• METAL(II) COMPLEXES WITH MONODENTATE S AND N LIGANDS AS STRUCTURAL MODELS FOR ZINC-SULFUR DNA-BINDING PROTEINS

  1999cited by this paper
• A new subfamily of short bacterial adenylate kinases with the Mycobacterium tuberculosis enzyme as a model: A predictive and experimental study

  1999cited by this paper
• Nucleoside monophosphate kinases: structure, mechanism, and substrate specificity.

  1999cited by this paper
• Structural and Energetic Factors of the Increased Thermal Stability in a Genetically Engineered Escherichia coliAdenylate Kinase*

  1998cited by this paper
• The structure of a trimeric archaeal adenylate kinase.

  1998cited by this paper
• ATP sulfurylases from sulfate-reducing bacteria of the genus Desulfovibrio. A novel metalloprotein containing cobalt and zinc.

  1998cited by this paper
• Metal chelating properties of adenylate kinase from Paracoccus denitrificans.

  1998cited by this paper
• Genetically Engineered Zinc-chelating Adenylate Kinase fromEscherichia coli with Enhanced Thermal Stability*

  1998cited by this paper
• Involvement of the N-finger in the Self-association of GATA-1*

  1998cited by this paper
• Thermodynamics and kinetics of unfolding of the thermostable trimeric adenylate kinase from the archaeon Sulfolobus acidocaldarius.

  1998cited by this paper
• Thiolate ligands in metallothionein confer redox activity on zinc clusters.

  1998cited by this paper
• Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+

  1998cited by this paper
• The metal site of Pseudomonas aeruginosa azurin, revealed by a crystal structure determination of the co(II) derivative and co‐EPR spectroscopy

  1997cited by this paper
• The adenylate kinase genes of M. voltae, M. thermolithotrophicus, M. jannaschii, and M. igneus define a new family of adenylate kinases.

  1997cited by this paper
• Zinc site redesign in T4 gene 32 protein: structure and stability of cobalt(II) complexes formed by wild-type and metal ligand substitution mutants.

  1997cited by this paper
• A new non-heme iron environment in Paracoccus denitrificans adenylate kinase studied by electron paramagnetic resonance and electron spin echo envelope modulation spectroscopy.

  1997cited by this paper
• The nicotinamide dinucleotide binding motif: a comparison of nucleotide binding proteins

  1996cited by this paper
• Adenylate kinase motions during catalysis: an energetic counterweight balancing substrate binding.

  1996cited by this paper
• The structure of bovine mitochondrial adenylate kinase: Comparison with isoenzymes in other compartments

  1996cited by this paper
• Adenylate kinase complements nucleoside diphosphate kinase deficiency in nucleotide metabolism.

  1996cited by this paper
• MODELING THE DNA METHYLPHOSPHOTRIESTER REPAIR SITE IN ESCHERICHIA COLI ADA. WHY ZINC AND FOUR CYSTEINES

  1995cited by this paper
• Binding of adenylate kinase to RNA.

  1995cited by this paper
• The adenylate kinases from a mesophilic and three thermophilic methanogenic members of the Archaea

  1995cited by this paper
• Zinc chelation and structural stability of adenylate kinase from Bacillus subtilis.

  1994cited by this paper
• The closed conformation of a highly flexible protein: The structure of E. coli adenylate kinase with bound AMP and AMPPNP

  1994cited by this paper
• Adenylate Kinase in Tobacco Cell Cultures. II. Variability and Regulation of Isoform Activity Patterns in Different Cell Lines

  1994cited by this paper
• Zinc, a structural component of adenylate kinases from gram-positive bacteria

  1994cited by this paper
• Molecular analysis of the essential gene for adenylate kinase from the fission yeast Schizosaccharomyces pombe.

  1993cited by this paper
• Ligand variation and metal ion binding specificity in zinc finger peptides

  1993cited by this paper
• Identification, cloning, and expression of the gene for adenylate kinase from the thermoacidophilic archaebacterium Sulfolobus acidocaldarius.

  1993cited by this paper
• Structural and physico-chemical characteristics of Bordetella pertussis adenylate kinase, a tryptophan-containing enzyme.

  1993cited by this paper
• Cobalt as probe and label of proteins.

  1993cited by this paper
• Zinc: biological functions and coordination motifs

  1993cited by this paper
• Archaebacterial adenylate kinase from the thermoacidophile Sulfolobus acidocaldarius: purification, characterization, and partial sequence.

  1993cited by this paper
• Structure of the complex between adenylate kinase from Escherichia coli and the inhibitor Ap5A refined at 1.9 A resolution. A model for a catalytic transition state.

  1992cited by this paper
• Zinc, a novel structural element found in the family of bacterial adenylate kinases.

  1992cited by this paper
• Protein stability and molecular adaptation to extreme conditions.

  1991cited by this paper
• Theoretical X-ray Absorption Fine Structure Standards

  1991cited by this paper
• Metal cofactors of lysine-2,3-aminomutase.

  1991cited by this paper
• Ab initio curved-wave x-ray-absorption fine structure.

  1991cited by this paper
• Spectroscopic studies of cobalt and nickel substituted rubredoxin and desulforedoxin.

  1991cited by this paper
• The amino acid sequence of adenylate kinase from Paracoccus denitrificans and its relationship to mitochondrial and microbial adenylate kinases.

  1989cited by this paper
• Characterization of the inhibitor complexes of cobalt carboxypeptidase A by electron paramagnetic resonance spectroscopy.

  1989cited by this paper
• Trigonal planar [Zn(SR)3]1- complex. A possible new coordination mode for zinc-cysteine centers

  1989cited by this paper
• A 13-element Ge detector for fluorescence EXAFS

  1988cited by this paper
• Metal-dependent folding of a single zinc finger from transcription factor IIIA.

  1987cited by this paper
• Structural and catalytic characteristics of Escherichia coli adenylate kinase.

  1987cited by this paper
• Spectroscopic properties of the cobalt(II)-substituted alpha-fragment of rabbit liver metallothionein.

  1986cited by this paper
• Gene 32 protein, the single-stranded DNA binding protein from bacteriophage T4, is a zinc metalloprotein.

  1986cited by this paper
• Muscle adenylate kinase catalyzes adenosine 5'-tetraphosphate synthesis from ATP and ADP.

  1986cited by this paper
• NMR studies of the AMP-binding site and mechanism of adenylate kinase.

  1986cited by this paper
• Cloning and sequencing of the adenylate kinase gene (adk) of Escherichia coli.

  1985cited by this paper
• Mercurial-promoted Zn2+ release from Escherichia coli aspartate transcarbamoylase.

  1984cited by this paper
• High spin cobalt(II) as a probe for the investigation of metalloproteins.

  1984cited by this paper
• Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features

  1983cited by this paper
• Simple and fast purification of Escherichia coli adenylate kinase

  1983cited by this paper
• The isolation of a hexaheme cytochrome from Desulfovibrio desulfuricans and its identification as a new type of nitrite reductase.

  1981cited by this paper
• Coordination environment of the active-site metal ion of liver alcohol dehydrogenase.

  1981cited by this paper
• The epr spectra of the inhibitor derivatives of cobalt carbonic anhydrase.

  1981cited by this paper
• Spectral studies of cobalt (II)- and Nickel (II)-metallothionein.

  1981cited by this paper
• ATP:AMP phosphotransferase from baker's yeast. Purification and properties.

  1980cited by this paper
• Site-specific substituted cobalt(II) horse liver alcohol dehydrogenases. Preparation and characterization in solution, crystalline and immobilized state.

  1979cited by this paper
• Purification and characterization of acidic adenylate kinase in porcine heart.

  1978cited by this paper
• Tetrahedral mercaptide complexes. Crystal and molecular structures of [(C6H5)4P]2M(SC6H5)4 complexes (M = cadmium(II), zinc(II), nickel(II), cobalt(II), and manganese(II))

  1978cited by this paper
• Cobalt exchange in horse liver alcohol dehydrogenase.

  1978cited by this paper
• Preparation and properties of cobalt(II) rubredoxin.

  1978cited by this paper
• Synthetic analogues of the active sites of iron-sulfur proteins. 14. Synthesis, properties, and structures of bis(o-xylyl-alpha,alpha'-dithiolato)ferrate(II, III) anions, analogues of oxidized and reduced rubredoxin sites.

  1977cited by this paper
• Inorganic chemistry; principles of structure and reactivity

  1972cited by this paper
• Electron paramagnetic resonance spectroscopy of bovine cobalt carbonic anhydrase B.

  1971cited by this paper
• Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

  1970cited by this paper
• Studies on the occurrence and biosynthesis of adenosine tetraphosphate.

  1966cited by this paper
• Le cytochrome c3 de Desulfovibrio gigas

  1965cited by this paper
• [CYTOCHOME C3 OF DESULFOVIBRIO GIGAS].

  1965cited by this paper

• Effects of zinc-oxide nanoparticles on soil microbial community and their functionality

  2021cites this paper
• Functions of elements in soil microorganisms.

  2021cites this paper
• Geographic distribution of cadmium and its interaction with the microbial community in the Longjiang River: risk evaluation after a shocking pollution accident

  2017cites this paper
• Trace Metal Imaging of Sulfate-Reducing Bacteria and Methanogenic Archaea at Single-Cell Resolution by Synchrotron X-Ray Fluorescence Imaging

  2017cites this paper
• Cobalt enrichment in anaerobic microbial cocultures revealed by synchrotron X-ray fluorescence imaging

  2016cites this paper
• Bioinformatics-Driven Enzyme Engineering: Work On Adenylate Kinase

  2015cites this paper
• Addressing the unmet need for visualizing conditional random fields in biological data

  2014cites this paper
• Magnetic properties of weakly exchange-coupled high spin Co(II) ions in pseudooctahedral coordination evaluated by single crystal X-band EPR spectroscopy and magnetic measurements.

  2014cites this paper
• Properties of proteolytic enzyme from ginger (Zingiber officinale Roscoe)

  2013cites this paper
• Properties of proteolytic enzyme from ginger (Zingiber officinale Roscoe)

  2013cites this paper
• Synthesis of zinc-based nanomaterials: a biological perspective.

  2012cites this paper
• Identification of functional motions in the adenylate kinase (ADK) protein family by computational hybrid approaches

  2011cites this paper
• A multifrequency high-field electron paramagnetic resonance study of Co(II)S(4) coordination.

  2010cites this paper
• Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria

  2010cites this paper
• Zinc-, cobalt- and iron-chelated forms of adenylate kinase from the Gram-negative bacterium Desulfovibrio gigas.

  2009cites this paper
• Cobalt-, zinc- and iron-bound forms of adenylate kinase (AK) from the sulfate-reducing bacterium Desulfovibrio gigas: purification, crystallization and preliminary X-ray diffraction analysis.

  2009cites this paper
• Biochemistry, physiology and biotechnology of sulfate-reducing bacteria.

  2009cites this paper