Non-contiguous finished genome sequence of Anoxybacillus flavithermus subsp. yunnanensis type strain (E13T), a strictly thermophilic and organic solvent-tolerant bacterium

Anoxybacillus flavithermus subsp. yunnanensis is the only strictly thermophilic bacterium that is able to tolerate a broad range of toxic solvents at its optimal temperature of 55–60°C. The type strain E13T was isolated from water-sediment slurries collected from a hot spring. This study presents the draft genome sequence of A. flavithermus subsp. yunnanensis E13T and its annotation. The 2,838,393bp long genome (67 contigs) contains 3,035 protein-coding genes and 85 RNA genes, including 10 rRNA genes, and no plasmids. The genome information has been used to compare with the genomes from A. flavithermus subsp. flavithermus strains.

• Publication year

  2014

• Venue

  Standards in Genomic Sciences

• Publication date

  2014-03-15

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.4056/sigs.4968750PMID 25197458PMCID 4148970
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• List of new names and new combinations previously effectively, but not validly, published: Validation List no. 166.

  2016cited by this paper
• List of new names and new combinations previously effectively, but not validly, published.

  2016cited by this paper
• The Road Map to the Manual

  2015cited by this paper
• List of new names and new combinations previously effectively, but not validly, published.

  2014cited by this paper
• Complete Genome Sequence of Anoxybacillus flavithermus TNO-09.006, a Thermophilic Sporeformer Associated with a Dairy-Processing Environment

  2013cited by this paper
• Recent discoveries and applications of Anoxybacillus

  2013cited by this paper
• A new subspecies of Anoxybacillus flavithermus ssp. yunnanensis ssp. nov. with very high ethanol tolerance.

  2011influential reference
• Isolation and characterization of a novel organic solvent‐tolerant Anoxybacillus sp. PGDY12, a thermophilic Gram‐positive bacterium

  2011cited by this paper
• The minimum information about a genome sequence (MIGS) specification

  2008cited by this paper
• List of new names and new combinations previously effectively, but not validly, published.

  2008cited by this paper
• Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1

  2008cited by this paper
• The minimum information about a genome sequence (MIGS) specification

  2008cited by this paper
• Isolation and characterization of Deinococcus geothermalis T27, a slightly thermophilic and organic solvent-tolerant bacterium able to survive in the presence of high concentrations of ethyl acetate.

  2008cited by this paper
• The RAST Server: Rapid Annotations using Subsystems Technology

  2008cited by this paper
• Effect of temperature on ethanol tolerance of a thermophilic anaerobic ethanol producer Thermoanaerobacter A10: Modeling and simulation

  2007cited by this paper
• RNAmmer: consistent and rapid annotation of ribosomal RNA genes

  2007cited by this paper
• List of new names and new combinations previously effectively, but not validly, published--Validation List no. 118.

  2007cited by this paper
• Validation List no. 117. List of new names and new combinations previously effectively, but not validly, published.

  2007cited by this paper
• Identifying bacterial genes and endosymbiont DNA with Glimmer

  2007cited by this paper
• List of new names and new combinations previously effectively, but not validly, published.

  2006cited by this paper
• Rfam: annotating non-coding RNAs in complete genomes

  2004cited by this paper
• Bacillus flavothermus, a newly isolated facultative thermophile

  2004cited by this paper
• Improved prediction of signal peptides: SignalP 3.0.

  2004cited by this paper
• Aerobic growth of Anoxybacillus pushchinoensis K1(T): emended descriptions of A. pushchinoensis and the genus Anoxybacillus.

  2003cited by this paper
• Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

  2001cited by this paper
• Gene Ontology: tool for the unification of biology

  2000cited by this paper
• Anoxybacillus pushchinensis gen. nov., sp. nov., a novel anaerobic, alkaliphilic, moderately thermophilic bacterium from manure, and description of Anoxybacillus flavitherms comb. nov.

  2000cited by this paper
• tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

  1997cited by this paper
• Investigation of the Ethanol Tolerance of Clostridium thermosaccharolyticum in Continuous Culture

  1995cited by this paper
• Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.

  1990cited by this paper
• Approved lists of bacterial names.

  1980cited by this paper
• Proposals Concerning the Higher Taxa of Bacteria

  1978cited by this paper
• Untersuchungen über Bakterien

  1875cited by this paper
• Untersuchungen über Bakterien

  year unknowncited by this paper

• Genomic comparison of anoxybacillus flavithermus AK1, a thermophilic bacteria, with other strains.

  2019cites this paper
• Novel Anoxybacillus flavithermus AK1: A Thermophile Isolated from a Hot Spring in Saudi Arabia

  2018cites this paper
• Novel Anoxybacillus flavithermus AK1: A Thermophile Isolated from a Hot Spring in Saudi Arabia

  2017cites this paper
• Increased enzymatic hydrolysis of sugarcane bagasse by a novel glucose- and xylose-stimulated β-glucosidase from Anoxybacillus flavithermus subsp. yunnanensis E13T

  2017cites this paper
• Thermophilic Spore‐Forming Bacilli in the Dairy Industry

  2015cites this paper
• Genome sequence of Anoxybacillus ayderensis AB04T isolated from the Ayder hot spring in Turkey

  2015cites this paper
• Chemolithoautotrophic arsenite oxidation by a thermophilic Anoxybacillus flavithermus strain TCC9-4 from a hot spring in Tengchong of Yunnan, China

  2015cites this paper