Evolution of photosynthetic prokaryotes: a maximum-likelihood mapping approach.

No abstract is available for this paper.

• Publication year

  2003

• Venue

  Philosophical transactions of the Royal Society of London. Series B, Biological sciences

• Publication date

  2003-01-29

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1098/RSTB.2002.1181PMID 12594930PMCID PMC1693105
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Complex evolution of photosynthesis.

  2003cited by this paper
• Photosynthesis: Likelihood of Occurrence and Possibility of Detection on Earth-like Planets

  2002cited by this paper
• Molecular mechanisms of photosynthesis

  2002cited by this paper
• TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

  2002influential reference
• Phototrophic consortia: model systems for symbiotic interrelations between prokaryotes

  2002cited by this paper
• Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses

  2002cited by this paper
• Whole-Genome Analysis of Photosynthetic Prokaryotes

  2002influential reference
• Horizontal Transfer of the Photosynthesis Gene Cluster and Operon Rearrangement in Purple Bacteria

  2001cited by this paper
• Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

  2001cited by this paper
• PAL: an object-oriented programming library for molecular evolution and phylogenetics

  2001cited by this paper
• Defining the Core of Nontransferable Prokaryotic Genes: The Euryarchaeal Core

  2001cited by this paper
• Daddy, where did (PS)I come from?

  2001cited by this paper
• Microbial genomes: dealing with diversity.

  2001cited by this paper
• The RDP-II (Ribosomal Database Project)

  2001influential reference
• Evolution. When did photosynthesis emerge on Earth?

  2000influential reference
• Interpreting the universal phylogenetic tree.

  2000cited by this paper
• When Did Photosynthesis Emerge on Earth?

  2000influential reference
• The COG database: a tool for genome-scale analysis of protein functions and evolution

  2000cited by this paper
• Molecular evidence for the early evolution of photosynthesis.

  2000influential reference
• The photosynthesis gene cluster of Rhodobacter sphaeroides

  1999cited by this paper
• Distinct Types of rRNA Operons Exist in the Genome of the Actinomycete Thermomonospora chromogena and Evidence for Horizontal Transfer of an Entire rRNA Operon

  1999cited by this paper
• An Escherichia coli strain with all chromosomal rRNA operons inactivated: complete exchange of rRNA genes between bacteria.

  1999cited by this paper
• Evolutionary relationships among photosynthetic prokaryotes (Heliobacterium chlorum, Chloroflexus aurantiacus, cyanobacteria, Chlorobium tepidum and proteobacteria): implications regarding the origin of photosynthesis

  1999cited by this paper
• Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes.

  1999cited by this paper
• BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT

  1999cited by this paper
• Horizontal gene transfer among genomes: the complexity hypothesis.

  1999cited by this paper
• Life in Ice-Covered Oceans

  1999cited by this paper
• Orthologs, paralogs and genome comparisons.

  1999cited by this paper
• Lateral genomics.

  1999cited by this paper
• Paleosols and the evolution of atmospheric oxygen: a critical review.

  1998influential reference
• Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles.

  1998cited by this paper
• Tracking molecular evolution of photosynthesis by characterization of a major photosynthesis gene cluster from Heliobacillus mobilis.

  1998cited by this paper
• The origin and evolution of oxygenic photosynthesis.

  1998cited by this paper
• Distribution of chromosome length variation in natural isolates of Escherichia coli.

  1998cited by this paper
• SEALS: A System for Easy Analysis of Lots of Sequences

  1997cited by this paper
• Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment.

  1997cited by this paper
• A genomic perspective on protein families.

  1997cited by this paper
• MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers

  1994cited by this paper
• Basic local alignment search tool.

  1990cited by this paper
• Bacterial evolution

  1987cited by this paper
• The green non-sulfur bacteria: a deep branching in the eubacterial line of descent.

  1987cited by this paper
• Evolution of reaction centers in photosynthetic prokaryotes.

  1987cited by this paper
• Heliobacterium chlorum, an anoxygenic brownish-green photosynthetic bacterium containing a “new” form of bacteriochlorophyll

  1983cited by this paper
• Activities of B. stearothermophilus 50 S ribosomes reconstituted with prokaryotic and eukaryotic 5 S RNA

  1973cited by this paper
• Interaction between Escherichia coli ribosomal proteins and 5S RNA molecules: recognition of prokaryotic 5S RNAs and rejection of eukaryotic 5S RNAs.

  1973cited by this paper
• Heterologous protein—RNA interactions in bacterial ribosomes

  1973cited by this paper
• Hybrid 30S Ribosomal Particles reconstituted from Components of Different Bacterial Origins

  1968cited by this paper

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  2024cites this paper
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  2024cites this paper
• Moving to the Light: The Evolution of Photosynthesis

  2019cites this paper
• Characteristics and Evolutionary Analysis of Photosynthetic Gene Clusters on Extrachromosomal Replicons: from Streamlined Plasmids to Chromids

  2019cites this paper
• Shedding light on a Group IV (ECF11) alternative σ factor

  2019cites this paper
• Comparative Analysis of Surface Layer Glycoproteins and Genes Involved in Protein Glycosylation in the Genus Haloferax

  2018cites this paper
• Horizontal operon transfer, plasmids, and the evolution of photosynthesis in Rhodobacteraceae

  2018cites this paper
• Bipartite Network Analysis of Gene Sharings in the Microbial World

  2018cites this paper
• Photoferrotrophy: Remains of an Ancient Photosynthesis in Modern Environments

  2017cites this paper
• Intein Epidemiology: A Study of the Lifestyle, Distribution, Phylogenetics, and Dynamics of Inteins

  2016cites this paper
• Photooxidation of Mn‐bicarbonate Complexes by Reaction Centers of Purple Bacteria as a Possible Stage in the Evolutionary Origin of the Water‐Oxidizing Complex of Photosystem II

  2015cites this paper
• Evidence for the presence of key chlorophyll-biosynthesis-related proteins in the genus Rubrobacter (Phylum Actinobacteria) and its implications for the evolution and origin of photosynthesis

  2015cites this paper
• Phototrophic Fe(II)-oxidation in the chemocline of a ferruginous meromictic lake

  2014cites this paper
• From Ionizing Radiation to Photosynthesis

  2014cites this paper
• Oxygenic Photosynthesis in Cyanobacteria

  2013cites this paper
• Molecular Markers for Photosynthetic Bacteria and Insights into the Origin and Spread of Photosynthesis

  2013cites this paper
• A Time to Scatter Genes and a Time to Gather Them

  2013cites this paper
• Regressive Evolution of Photosynthesis in the Roseobacter Clade

  2013cites this paper
• Origin and spread of photosynthesis based upon conserved sequence features in key bacteriochlorophyll biosynthesis proteins.

  2012influential citation
• Adventures with Cyanobacteria: A Personal Perspective

  2011cites this paper
• Adventures with cyanobacteria : a personal perspective

  2011cites this paper
• The Evolution of Cyanobacteria and Photosynthesis

  2011cites this paper
• Universally Distributed Single-Copy Genes Indicate a Constant Rate of Horizontal Transfer

  2011cites this paper
• Corrigendum to: Chemical Evidence for the Dawn of Life on Earth

  2011cites this paper
• Categorical data analysis in experimental biology.

  2010cites this paper
• Taxonomy, phylogeny, and ecology of the heliobacteria

  2010cites this paper
• Pre-Proof Version : Horizontal gene transfer and the formation of groups of microorganisms

  2010cites this paper
• Rethinking the Paleoproterozoic Great Oxidation Event: A Biological Perspective

  2010influential citation
• Bacterial responses to photo-oxidative stress

  2009cites this paper
• An Overview of Purple Bacteria: Systematics, Physiology, and Habitats

  2009cites this paper
• Contributions of anoxygenic and oxygenic phototrophy and chemolithotrophy to carbon and oxygen fluxes in aquatic environments.

  2009cites this paper
• The Evolution of Photosynthesis and Its Environmental Impact

  2008cites this paper
• Noncovalent assembly of a metalloporphyrin and an iron hydrogenase active-site model: photo-induced electron transfer and hydrogen generation.

  2008cites this paper
• Origin and Evolution of Photosynthesis: Clues from Genome Comparison

  2008cites this paper
• Phototroph genomics ten years on

  2008cites this paper
• Evolutionary biology: Out of thin air

  2007cites this paper
• The Evolution of Photosynthesis and its

  2007cites this paper
• The cyanobacterial genome core and the origin of photosynthesis

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• Development of the bacterial photosynthetic apparatus.

  2006cites this paper
• Occurrence of Hydrogenases in Cyanobacteria and Anoxygenic Photosynthetic Bacteria: Implications for the Phylogenetic Origin of Cyanobacterial and Algal Hydrogenases

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• Studying Evolution Using Genome Sequence Data

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• The Evolution of Photosynthesis and the Transition from an Anaerobic to an Aerobic World

  2005cites this paper
• [Animals (Animalia) in the system of organisms. 1. Typological systems].

  2005cites this paper
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  2004cites this paper
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  2004cites this paper
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• An SVD-based comparison of nine whole eukaryotic genomes supports a coelomate rather than ecdysozoan lineage

  2004cites this paper
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  2004cites this paper
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