Discriminating coding, non-coding and regulatory regions using rescaled range and detrended fluctuation analysis

No abstract is available for this paper.

• Publication year

  2008

• Venue

  Biosyst.

• Publication date

  Unknown publication date

• Fields of study

  Biology, Mathematics, Medicine, Computer Science

• Identifiers
  DOI 10.1016/J.BIOSYSTEMS.2007.05.019PMID 18029086
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Nonparametric Statistics for the Behavioral Sciences

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• Estimators for Long Range Dependence: An Empirical Study

  2009cited by this paper
• Statistical Measures of the Structure of Genomic Sequences: Entropy, Complexity, and Position Information

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  2003cited by this paper
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  2002cited by this paper
• Lévy scaling: the diffusion entropy analysis applied to DNA sequences.

  2002cited by this paper
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  2002cited by this paper
• Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo

  2001cited by this paper
• Latent Periodicity of Many Genes

  2001influential reference
• Long-range correlations in genomic DNA: a signature of the nucleosomal structure.

  2001cited by this paper
• Multifractal Characterisation of Length Sequences of Coding and Noncoding Segments in a Complete Genome

  2001cited by this paper
• Long-Range Correlations in Genomic DNA

  2001cited by this paper
• Maternal protein deficiency causes hypermethylation of DNA in the livers of rat fetuses.

  2000cited by this paper
• Nutrient and hormonal regulation of pyruvate kinase gene expression.

  1999cited by this paper
• Regulation of gene expression by dietary fat.

  1999cited by this paper
• DECOMPOSITION OF DNA SEQUENCE COMPLEXITY

  1999cited by this paper
• Study of correlations in segmented DNA sequences: application to structure coupling between exons and introns.

  1998influential reference
• The complexity of DNA

  1997cited by this paper
• The Measure of Compositional Heterogeneity in DNA Sequences Is Related to Measures of Complexity

  1997cited by this paper
• Correlations in DNA sequences: The role of protein coding segments

  1997cited by this paper
• Spatial and temporal information processing in the sea urchin embryo: modular and intramodular organization of the CyIIIa gene cis-regulatory system.

  1996cited by this paper
• ESTIMATORS FOR LONG-RANGE DEPENDENCE: AN EMPIRICAL STUDY

  1995cited by this paper
• Long-range correlation properties of coding and noncoding DNA sequences: GenBank analysis.

  1995influential reference
• Fractals in Science

  1995cited by this paper
• Universality in a DNA statistical structure.

  1995cited by this paper
• Mosaic organization of DNA nucleotides.

  1994influential reference
• Linguistic features of noncoding DNA sequences.

  1994cited by this paper
• Correlation approach to identify coding regions in DNA sequences.

  1994cited by this paper
• Fractals in Biology and Medicine: From DNA to the Heartbeat

  1994cited by this paper
• Long-range fractal correlations in DNA.

  1993cited by this paper
• Evolution of long-range fractal correlations and 1/f noise in DNA base sequences.

  1992cited by this paper
• Fractals, Chaos, Power Laws: Minutes From an Infinite Paradise

  1992influential reference
• Estimation and information in stationary time series

  1953cited by this paper

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  2013cites this paper
• Numericalization of the self adaptive spectral rotation method for coding region prediction.

  2012cites this paper
• A method for extracting period~10 modulations from DNA sequence correlations applied to the Drosophila melanogaster genome.

  2012cites this paper
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  2012cites this paper
• A statistical feature of Hurst exponents of essential genes in bacterial genomes.

  2012cites this paper
• Predicting coding region candidates in the DNA sequence based on visualization without training

  2011cites this paper
• Visualization of the protein-coding regions with a self adaptive spectral rotation approach

  2010cites this paper
• The role played by exons in genomic DNA sequence correlations.

  2010cites this paper
• A New Method to Determine the Periodicity of Time Series

  2010cites this paper
• Integrating genomic binding site predictions using real-valued meta classifiers

  2009influential citation
• Discrimination of regulatory DNA by SVM on the basis of over- and under-represented motifs

  2008cites this paper